New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 2700550 =162 (1.220)14 (0.120) 12/238 13.4 9.4% noncoding (31/77 nt) ohsC sRNA antisense regulator of shoB toxin
?NC_000913_3_pae_tpiA 2700601 = 129 (1.130)intergenic (+5/+17) ohsC/acpS sRNA antisense regulator of shoB toxin/holo‑[acyl‑carrier‑protein] synthase 1
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 146 total aligned reads displayed.

TCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCG  >  NC_000913_3_pae_tpiA/2700452‑2700747
                                                                                                                                                      |                                                                                                                                                  
tCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaaa                                                                                                                                                    >  1:1352382/1‑150 (MQ=255)
tCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaaa                                                                                                                                                    <  4:541453/150‑1 (MQ=255)
    gTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAgaga                                                                                                                                                >  1:1002202/1‑150 (MQ=255)
       tttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACg                                                                                                                                             <  2:581545/150‑1 (MQ=255)
        ttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACgg                                                                                                                                            >  3:246863/1‑150 (MQ=255)
        ttATGCCAAAGAGTGCAAGTTGCTTGTAAAAGATGCGTGCACTGATCCATACACGCTGTTGTTGGGGGTGACT‑GCGGGACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACGAGTTGGGGGGGGTTACTTTTGAAAGAGAACgg                                                                                                                                            >  2:722832/1‑150 (MQ=255)
         tATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGt                                                                                                                                           >  1:429852/1‑150 (MQ=255)
         tATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCACCATTCCTTTCCGTTTCGGGGGTTTTACTTTTTGAAGAGAACGGt                                                                                                                                           <  2:791918/150‑1 (MQ=255)
              tAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGtattat                                                                                                                                      <  3:53463/150‑1 (MQ=255)
               aaaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTattatt                                                                                                                                     >  2:3725/1‑150 (MQ=255)
                aaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttt                                                                                                                                    <  1:244817/150‑1 (MQ=255)
                aaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttt                                                                                                                                    >  3:310082/1‑150 (MQ=255)
                  gATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttttt                                                                                                                                  <  1:799373/150‑1 (MQ=255)
                    ttGCAAGTTGCTTGTAAAAGATAAGTTCCCTGATACATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTaa                                                                                                                                <  2:1407953/150‑1 (MQ=255)
                    ttGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTACAGCGAACGGTCTTATCTTTaa                                                                                                                                >  2:1365503/1‑150 (MQ=255)
                    ttGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTaa                                                                                                                                <  4:413749/150‑1 (MQ=255)
                      gCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTCCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTGACCAGAGCGGGGGGTTTACTTTTTAAAGAGAACGGTATTATTTTTAACt                                                                                                                              >  1:648441/1‑150 (MQ=255)
                       cAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACtt                                                                                                                             >  3:627799/1‑150 (MQ=255)
                        aaGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACttt                                                                                                                            <  2:1105486/150‑1 (MQ=255)
                           ttGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTTTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCaa                                                                                                                         <  1:1158232/150‑1 (MQ=255)
                           ttGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCaa                                                                                                                         <  2:540015/150‑1 (MQ=255)
                                  tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTAc                                                                                                                  >  3:684074/1‑150 (MQ=255)
                                  tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTAc                                                                                                                  >  1:756383/1‑150 (MQ=255)
                                   aaaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaaa                                                                                                                                                    >  1:1101374/1‑115 (MQ=255)
                                    aaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCg                                                                                                                >  1:664724/1‑150 (MQ=255)
                                       gATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGtattat                                                                                                                                      >  2:1180877/1‑125 (MQ=255)
                                       gATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGtattat                                                                                                                                      <  1:1180877/125‑1 (MQ=255)
                                          aaGTACACTGATCCAAACTCCCTGTTGCTGCTGG‑GCGTCACTGCACAAAATTAAAGTTAGAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGcac                                                                                                          <  1:281472/150‑1 (MQ=255)
                                              acacTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGc                                                                                                      <  1:1416098/150‑1 (MQ=255)
                                              acacTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGc                                                                                                      <  1:294849/150‑1 (MQ=255)
                                              acacTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGc                                                                                                      <  3:355422/150‑1 (MQ=255)
                                               cacTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAGGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGCTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCa                                                                                                     >  2:844301/1‑150 (MQ=255)
                                                acTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCAt                                                                                                    <  1:1315897/150‑1 (MQ=255)
                                                 cTGTTCGATAATGGTTGTTGTTGAGGGTGCAT‑GCTGAACAAAATTAAAGTTAAATAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATa                                                                                                   <  4:494414/150‑1 (MQ=255)
                                                  tGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATa                                                                                                   >  2:436892/1‑149 (MQ=255)
                                                  tGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAg                                                                                                  <  3:84032/150‑1 (MQ=255)
                                                   gATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGt                                                                                                 >  1:660759/1‑150 (MQ=255)
                                                    aTCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTg                                                                                                >  2:313693/1‑150 (MQ=255)
                                                    aTCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTg                                                                                                >  3:509889/1‑150 (MQ=255)
                                                       cATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTAACAGTTCGGGGGATTTACTTTTTAACACGATAGGTATAAATTTTACCTTTCAATAATTACCGTGCCACCAGCATAGTGACg                                                                                             >  1:499229/1‑150 (MQ=255)
                                                        aTAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGc                                                                                            >  3:689617/1‑150 (MQ=255)
                                                        aTAATCACTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTCCAATAATTACCGTGGCACAAGCATAGTGCCGc                                                                                            <  1:1445101/150‑1 (MQ=255)
                                                           aTCGCTGTTGTTGAGTGTGCAT‑GCTTCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTc                                                                                                                           <  4:839934/116‑1 (MQ=255)
                                                           aTCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCa                                                                                         >  1:159900/1‑150 (MQ=255)
                                                                tgttgtTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGc                                                                                    <  1:217067/150‑1 (MQ=255)
                                                                tgttgtTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGc                                                                                    >  4:79507/1‑150 (MQ=255)
                                                                    gttgAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGc                                                                                >  1:963019/1‑150 (MQ=255)
                                                                     ttgAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCg                                                                               >  3:6411/1‑150 (MQ=255)
                                                                        aGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTa                                                                            >  1:1412551/1‑150 (MQ=255)
                                                                           gTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACAt                                                                         <  4:310082/150‑1 (MQ=255)
                                                                            tGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATg                                                                        <  2:711151/150‑1 (MQ=255)
                                                                            tGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATg                                                                        >  2:1194419/1‑150 (MQ=255)
                                                                            tGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATg                                                                        <  3:442920/150‑1 (MQ=255)
                                                                             gCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGc                                                                       >  4:63989/1‑150 (MQ=255)
                                                                                  gctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCatat                                                                   >  1:86632/1‑150 (MQ=255)
                                                                                    tgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATAttt                                                                 >  3:526039/1‑150 (MQ=255)
                                                                                     gcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTg                                                                <  1:591524/150‑1 (MQ=255)
                                                                                      cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGta                                                                                                                                          <  4:891818/75‑1 (MQ=255)
                                                                                      cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGta                                                                                                                                          >  3:891818/1‑75 (MQ=255)
                                                                                      cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACAt                                                                         <  1:763517/140‑1 (MQ=255)
                                                                                      cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACAt                                                                         >  2:763517/1‑140 (MQ=255)
                                                                                          aaaTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACg                                                           <  4:503032/150‑1 (MQ=255)
                                                                                                aaGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGc                                                     <  1:1081606/150‑1 (MQ=255)
                                                                                                aaGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGc                                                     <  1:1069344/150‑1 (MQ=255)
                                                                                                 aGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCt                                                    >  1:1344492/1‑150 (MQ=255)
                                                                                                 aGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCt                                                    >  2:860509/1‑150 (MQ=255)
                                                                                                   ttAAAAATTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCttt                                                  <  4:589750/150‑1 (MQ=255)
                                                                                                    tAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCtttt                                                 >  1:1184143/1‑150 (MQ=255)
                                                                                                     aaaaaGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGc                                                                                               >  1:1034940/1‑103 (MQ=255)
                                                                                                     aaaaaGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGc                                                                                               <  2:1034940/103‑1 (MQ=255)
                                                                                                       aaaGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCg                                              >  1:456241/1‑150 (MQ=255)
                                                                                                          gTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGc                                                                       <  4:631711/122‑1 (MQ=255)
                                                                                                          gTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGc                                                                       >  3:631711/1‑122 (MQ=255)
                                                                                                           tAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAg                                          >  1:880097/1‑150 (MQ=255)
                                                                                                             aaaCCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGtt                                        >  1:1116983/1‑150 (MQ=255)
                                                                                                                    cGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGc                                 >  2:181475/1‑150 (MQ=255)
                                                                                                                      ttCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCt                               >  1:522025/1‑150 (MQ=255)
                                                                                                                        ccTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTTTATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCg                             >  4:485423/1‑150 (MQ=255)
                                                                                                                         cTTACCAGTTCGGGGGTTTTACTTTTAAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGc                            <  2:1047563/150‑1 (MQ=255)
                                                                                                                           tACCAGGTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGccc                          >  4:242631/1‑150 (MQ=255)
                                                                                                                            aCCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGcccc                         >  3:438970/1‑150 (MQ=255)
                                                                                                                              cAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCa                                           >  1:478083/1‑130 (MQ=255)
                                                                                                                              cAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCa                                           <  2:478083/130‑1 (MQ=255)
                                                                                                                              cAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAt                       >  2:483067/1‑150 (MQ=255)
                                                                                                                                gTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGACCCAGCATAGTGCCGGTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAtag                     >  1:27036/1‑150 (MQ=255)
                                                                                                                                 ttCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAtagc                    <  2:86632/150‑1 (MQ=255)
                                                                                                                                  tCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAtagcc                   <  2:1133559/150‑1 (MQ=255)
                                                                                                                                      gggTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAtagccgtag               <  3:77666/150‑1 (MQ=255)
                                                                                                                                        gTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTAGCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCAAGTTTTGATGCCTCGCCCCAtagccgtagcc             >  2:136980/1‑150 (MQ=255)
                                                                                                                                        gTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAtagccgtagcc             <  1:687320/150‑1 (MQ=255)
                                                                                                                                         ttttACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCAtagccgtagccg            >  4:705550/1‑150 (MQ=255)
                                                                                                                                           ttACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTc                              >  1:45340/1‑130 (MQ=255)
                                                                                                                                           ttACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTg          >  1:1021306/1‑150 (MQ=255)
                                                                                                                                            tACTTTTTAAAGAGAACGGTATTATTTTTCACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCTTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTgg         <  4:842956/150‑1 (MQ=255)
                                                                                                                                            tACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTgg         >  3:799709/1‑150 (MQ=255)
                                                                                                                                             aCTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGt        >  4:164780/1‑150 (MQ=255)
                                                                                                                                               tttttAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGttt      >  3:487050/1‑150 (MQ=255)
                                                                                                                                               tttttAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGttt      >  4:661910/1‑150 (MQ=255)
                                                                                                                                               tttttAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGttt      >  1:1055697/1‑150 (MQ=255)
                                                                                                                                                   tAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCg  >  3:139292/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                  
TCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCAT‑GCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCG  >  NC_000913_3_pae_tpiA/2700452‑2700747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.