New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_vch_tpiA	= 2347214	44 (0.930)	5 (0.110)	5/272	6.0	9.0%	noncoding (55/203 nt)	REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences	REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences
	?	NC_000913_3_vch_tpiA	3042447 =	59 (1.310)					noncoding (127/155 nt)	REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCA  >  NC_000913_3_vch_tpiA/3042299‑3042590                                                                                                                                                     |                                                                                                                                                tttATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTGTCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATg                                                                                                                                                 >  1:417680/1‑149 (MQ=255)    aTCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGa                                                                                                                                              >  1:699182/1‑149 (MQ=255)     tCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGAGTCTTATCATTTCTGGGATTTGATGCCTTTATCACAACAAGGACGCGGACCGTAGATCGGATAAGGCGGTCACGCAGAATACTGCAGCTGTCGTCCGATGCCTGGTGTGAc                                                                                                                                             >  2:61169/1‑149 (MQ=255)      cGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACg                                                                                                                                            <  2:697428/149‑1 (MQ=255)        cATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCCCAACAGGGACGAGGCCCGTAGATCGGATAAGGCGCTCACGCCGAATCCGGCCGTTGTGCTCCGATGCCTGCTGCGACGCt                                                                                                                                          >  2:32888/1‑149 (MQ=255)          tCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTgg                                                                                                                                        <  1:631459/149‑1 (MQ=255)              gCATTTCTCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGCCGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAGTCCGGCAGTTGTGCTCCGATGCCTGATGCGGCGCTGGcgcg                                                                                                                                    >  1:739642/1‑149 (MQ=255)                aTTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTc                                                                                                                                  <  1:168067/149‑1 (MQ=255)                     tCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                             >  2:41678/1‑149 (MQ=255)                                 aggCTGGCGCGTCTTATCATGTCCGGGATTTGATGCCTTTATCACAACAGGGATGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAg                                                                                                                 <  1:485184/147‑1 (MQ=255)                                 aCGCTGGCGCGTCTTAGCATGGCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAg                                                                                                                 <  2:193475/149‑1 (MQ=255)                                  accTGGTGCGCCTGATCGTGTCTTGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAgg                                                                                                                <  2:415899/147‑1 (MQ=37)                                       gcgcGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATAc                                                                                                           >  2:682175/1‑149 (MQ=255)                                        cgcgTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATAcc                                                                                                          <  1:682175/149‑1 (MQ=255)                                         gcgTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATAccc                                                                                                         >  2:748538/1‑149 (MQ=255)                                            tCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCAtt                                                                                                      <  1:41678/149‑1 (MQ=255)                                             cTTATCATGTCTGGGATTTGACGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGGATACCCATTa                                                                                                     <  1:812421/149‑1 (MQ=255)                                                attaTGTCAGAGATTTGATGCCTTTATCACAACAGGGATGAGGCCGGTAGACCGGACAAGCAGTTCTTGACGACTCCGGCTGTATTGCTCCGATGCCTGTTGCGACGCTGGCCCGTTTTGTCAGGCCTACACAGGCAGACCCCGTACGc                                                                                                  <  2:507914/146‑1 (MQ=255)                                                   aTGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTg                                                                                               >  2:499021/1‑149 (MQ=255)                                                       atGGGATATGATGCCGTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACACCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCAATACGCCTGccaa                                                                                           >  2:725793/2‑147 (MQ=37)                                                        tGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCATGCCGCATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGTCGCGTCTTGTCCGGCCTACAAAGGGATACAGCTTAGGCCTGcaaaa                                                                                          >  1:382751/1‑145 (MQ=25)                                                          ggATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATGCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCaaga                                                                                        >  1:443034/1‑147 (MQ=255)                                                                 aTGCCTTTATCACAACAGGGACGAGGCCCGCAGATCGGATCAGACCCTCACGCCGAATCCGGCAGTTTTGGGCCGATGCCGGATGCGCCGCTGGCACCTCTTAGCAGGCCTACAAAAGCATACCCCTGCGACCTACCCAATCTACaaga                                                                                 >  2:269633/1‑147 (MQ=255)                                                                  tGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATa                                                                                <  1:499021/149‑1 (MQ=255)                                                                    ccTTTATCACAAAAGGGACGAGGCCCGTAGGTCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGa                                                                              <  1:75751/149‑1 (MQ=255)                                                                     cTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATCCAAATAGAt                                                                             >  1:670929/1‑149 (MQ=255)                                                                      tttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAACATACAAATAGaac                                                                            >  1:64753/1‑147 (MQ=255)                                                                      tttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATAACGCCTGCCCAATATACAAATAGATc                                                                            >  1:427587/1‑149 (MQ=255)                                                                        tATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGc                                                                          <  2:612012/149‑1 (MQ=255)                                                                        tATCACAACAGGGACGAGGCCCATAGGACGTATAACGCGTTCCCGCCTAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGc                                                                          <  1:736042/149‑1 (MQ=37)                                                                         aTCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGCCGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCACTCTCCAAATAGATCGcc                                                                         >  2:307026/1‑149 (MQ=255)                                                                            acaacaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGa                                                                      >  2:579913/1‑149 (MQ=255)                                                                              aacaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGaaa                                                                    >  1:58656/1‑149 (MQ=255)                                                                              aacaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCAACGCTGGCGCGTCTTATAAGGCCTACAAAGGCATACCCCTTACGCCTGCCCAATATACAAATAGATCGCCGGaaa                                                                    >  1:599884/1‑149 (MQ=255)                                                                               acaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAg                                                                   >  2:175256/1‑149 (MQ=255)                                                                                 aGGGACGAGGCCCGTACACGGGAAAAGGCGTACAGGCCGAATCCGTCAGTTGGGCTCCGATGCCTGATGCGACGCTGGCGCGTCTCATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTg                                                                 <  2:743639/149‑1 (MQ=37)                                                                                  gggACGAGGCCCGAGGAGCGGAGAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTgg                                                                <  1:317251/149‑1 (MQ=255)                                                                                   ggACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGGAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACGCATTACGCCTGCCCAATATACAAATAGATCGCCAAAAAGTGGc                                                               >  1:527623/1‑149 (MQ=255)                                                                                         ggCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATCACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGTCacacac                                                         <  2:427587/149‑1 (MQ=255)                                                                                            ccGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATAc                                                                                     <  1:14834/118‑1 (MQ=255)                                                                                            ccGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATAc                                                                                     >  2:14834/1‑118 (MQ=255)                                                                                              gTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCTTTACCCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACGCACTAccg                                                    >  1:441713/1‑149 (MQ=255)                                                                                               tAGATCGGATAGGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGAGCCGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTAccgc                                                   <  1:693181/149‑1 (MQ=255)                                                                                               tAGATCGGATAAGGCGTTCGCGCCGAATCCGGCAGTTGTGCTCCGATGCCTCATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTAccgc                                                   <  1:692252/149‑1 (MQ=255)                                                                                               tAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGAACATCGAGCCTCTTAGCAGGCTTACAAAGGCATACCCATTACGCCTGCCCAATATAAAAATAGATCGCCAGAAAGTGGCACACACTAccca                                                   >  2:551567/1‑147 (MQ=255)                                                                                                  aTCTGATAAGCCCTTCACGCCCAATACGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGa                                                <  1:700079/149‑1 (MQ=38)                                                                                                  aTCGGCTAAGGCGTTCACGCCGAGTCCGGCAGTTGTGCTTCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTATATAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCGAGCAAGGTGTACACACTACCGCCGa                                                <  2:682292/149‑1 (MQ=37)                                                                                                    cGGATACGGCGTTAACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCCACGCTGGCGCGTCTTATCAGGCATACAAAGGCATACCCATTACGCATGCCCAATATACAAATAGATGGCCAGAAAGTGGAACACACTACCGCCCAGc                                              >  2:225224/1‑149 (MQ=37)                                                                                                     ggATAAGGGGTTCACGCCGAATCCGGAAGTTGGTCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTCCGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCa                                             <  2:819334/149‑1 (MQ=38)                                                                                                       aTAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCGTTACGCATGCCCAATATACAAATAGATCGCCAGAAAGTGGCCCACACTACCGCAGAGAACg                                           >  2:632881/1‑149 (MQ=37)                                                                                                              gTTCACGTCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGTGCGTCTTATCAGGCATACAAAGGCATACCCATTACGACTGCCGAATATACAAAGAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGt                                    <  2:95504/149‑1 (MQ=38)                                                                                                                tCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGc                                  <  1:579913/149‑1 (MQ=255)                                                                                                                      cGAAGCCGGCAGTTGTGCTCCGATGGCGGAGTCGACGCTGGCGCGGCTTATCAGGCCTACAAGGGCAGACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATg                            <  2:343420/149‑1 (MQ=255)                                                                                                                             ggCAGTTGTGCTCCGATGCCTGATACGACGCTGGCGCGTCTTCGCAGGCCTACAAAGGCATACCCCTTACGCCGGCCCAATACACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAACCGTGCCAGATGGCATGGt                     >  2:750654/1‑149 (MQ=255)                                                                                                                                      gCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGaa            <  1:765654/149‑1 (MQ=255)                                                                                                                                         acGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACACATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGc         <  1:501958/148‑1 (MQ=255)                                                                                                                                          cGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCg        >  1:426649/1‑149 (MQ=255)                                                                                                                                           gATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGt       <  1:693807/149‑1 (MQ=255)                                                                                                                                           gATGCCTGATGCCACGCTCGCGCCTCTTATCAGGCCTACGAAGGCATGCCCATTACGCCTGCCCAATATACAAATAGATTGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCTGATGGCATGGTTGTATGGAATGCGt       <  1:632881/149‑1 (MQ=255)                                                                                                                                             tgacTGATGCGACGCTGGCGTGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCACAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGCGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGttt     <  1:79579/146‑1 (MQ=255)                                                                                                                                                cTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATGCAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCa  >  1:134675/1‑149 (MQ=255)                                                                                                                                                cTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCa  <  1:600142/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                TTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCA  >  NC_000913_3_vch_tpiA/3042299‑3042590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.