BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 437880	476 (0.340)	356 (0.200) +ATAT	83/188	35.9	36.4%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	437881 =	673 (0.370)	356 (0.200) +ATAT	83/188	35.9	36.4%	intergenic (‑185/+237)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1058 total aligned reads displayed.

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑a                                                                                                                                 >  2:762324/1‑128 (MQ=255)

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑a                                                                                                                                 >  1:1227420/1‑128 (MQ=255)

 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑at                                                                                                                                >  1:1705365/1‑128 (MQ=255)

      tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatata                                                                                                                           >  1:1639936/1‑128 (MQ=255)

       aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatat                                                                                                                          >  2:2383427/1‑128 (MQ=255)

        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatata                                                                                                                         >  2:277716/1‑128 (MQ=255)

         ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatat                                                                                                                        >  1:3869252/1‑128 (MQ=255)

           ttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatat                                                                                                                      >  2:3331143/1‑128 (MQ=255)

            tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatata                                                                                                                     >  2:2212051/1‑128 (MQ=255)

              tatttGTTATTTTTATTTTTTATAAATTATAGATATAAAAATTTTATTTTTAAAATATATATTTTATTAAATTAATAAAATAAAAAAACTCCATATTATCTATAGATTTTAA‑‑‑‑t‑‑‑‑atatatatatatata                                                                                                                   <  2:3535796/125‑1 (MQ=255)

              tatttGTTAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatata                                                                                                                   <  2:3856460/125‑1 (MQ=255)

                 aaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatat                                                                                                                >  2:1266511/4‑128 (MQ=255)

                  tgtttgtttatttttttATATATATTATATATATATATTTTTTTTTTTAAATAAATATTTTATTAAATTTTTAAAACAAAAAAACTCTCTATTATCTATAGAGATATT‑‑‑‑t‑‑‑‑atatatatatatatatata                                                                                                               <  2:2641312/117‑1 (MQ=255)

                     tattttatattttAATAAATATAATAAAAAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                            <  2:1782308/119‑1 (MQ=255)

                     aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                            >  2:1067415/1‑128 (MQ=255)

                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                           >  2:505017/1‑128 (MQ=255)

                       ttttCATTTTTAATAAATATTATATATAAAAAATGTATTTTTAAAATAAATATTTTATCAAATTAATCAAATAAAAAACATCCAAATTACAAATAGAGATAAA‑‑‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                          <  1:3383535/127‑1 (MQ=255)

                         ataaTTTTAAATAAAAATAATAAATAAAAATTTTATATTTAAAATAAATATTTTAGTAAATCCCCCAAACCAAAAACCACCATATTAACTATAGAGATAAA‑‑‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                        <  1:2079957/125‑1 (MQ=255)

                           cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAATCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                      <  1:185581/128‑1 (MQ=255)

                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatataaaagagatc                                                                                                  >  1:2450449/1‑119 (MQ=255)

                                  tataaataTTATATATAAAAATTGTATTTTTAAAATAAATATATTATTATATTTATATAATAAAAAACATACATATTATCTATAGAGTTAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCg                                                                                               <  2:1378042/127‑1 (MQ=255)

                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGAt                                                                                             <  1:557110/128‑1 (MQ=255)

                                   ataaataTTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAATCAAAAACCTCCATATTTCCTATAGAGTTAAT‑‑‑‑T‑‑‑‑atatatatatatatatatatatatatatatgcaagc                                                                                              <  1:255030/128‑9 (MQ=255)

                                     aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatatatatatatat                                                                                            >  1:2031530/1‑118 (MQ=255)

                                     aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCGATc                                                                                            >  1:3815099/1‑128 (MQ=255)

                                       atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAATAGATCAg                                                                                          >  2:1543389/1‑128 (MQ=255)

                                         atTATAAATAATAATATTTTATTTATAATATATATATTAGTATATGAAGAAAAGAAATTACATCCATATTACCTATAGAGTTTAT‑‑‑‑G‑‑‑‑‑‑‑T‑TATATATATATATATATATATATGCAAGCGTTCAGCATata                                                                                    <  1:618466/128‑3 (MQ=255)

                                          ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCatc                                                                                         >  2:555917/1‑126 (MQ=255)

                                           tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGATATTAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                    <  2:2972197/128‑1 (MQ=255)

                                             taaaTAAAAATTTTATTTTTAAAATATATATTTTATTAAATTAATAAAATAAAAAATATATATATTAAATATAGAGTT‑‑T‑‑‑‑A‑‑‑‑AGATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAt                                                                                  <  2:3029001/127‑1 (MQ=255)

                                             gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTAAAGCGATCAGCATaaa                                                                                    >  2:3246029/1‑128 (MQ=255)

                                              aaaTATAAATTTTATTTTTAAAATAAATATATTATTATATTAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                     <  2:3132676/128‑1 (MQ=255)

                                               aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                          <  1:3246912/128‑1 (MQ=255)

                                                aTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GATATATATATATATATATATATATATATATATGCTAGCGATCAGCATaa                                                                                     >  1:1003664/1‑128 (MQ=255)

                                                   aatattttattttTTAAATAAATATTTTAGGAAATCAACCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                          <  2:1663379/125‑1 (MQ=255)

                                                   aaaaTTTTATTTTTAAAATAAATATTTTATTAAATGAATAAAAGCAAAAACATCAATATTAACTATAGAGATAAA‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                              <  1:3740165/128‑1 (MQ=255)

                                                   aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATTCAAGCGCTCATCATAAAATgg                                                                                >  2:1877639/1‑128 (MQ=255)

                                                    aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGt                                                                               >  1:1569508/1‑128 (MQ=255)

                                                     aatttattttttAAAATAAATATTTTTTTAAATTAATCAAATCAAAAACATCAATATTAAATATAGATTTAAT‑‑‑‑T‑‑‑‑ATATATATTTATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGaa                                                                            <  2:2288314/121‑1 (MQ=255)

                                                       ttttATTTTAAAAATAAATATTATAGGACATGACTCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                          <  2:2026195/125‑1 (MQ=255)

                                                       ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCACGCGCTCAGCATAAATTGTTGaa                                                                            >  1:2644642/1‑128 (MQ=255)

                                                       ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGCTCAGCATAAAATAGAGAAAt                                                                          >  2:2128364/1‑128 (MQ=255)

                                                        tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGAAAGCGCTCAGCATAAAATGGTGaat                                                                           >  2:2705517/1‑127 (MQ=255)

                                                            tttttAAAATAAATATTTTAGGAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                 <  1:1464133/128‑1 (MQ=255)

                                                            tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATA‑‑CAAGCGATAATAATAAAATTGTGATATTTAGATc                                                                   >  1:1307382/1‑128 (MQ=255)

                                                                tAAAATATATATTTTTTTAAATTAATAAAATATAAAACATATATATAATCTATAGAGTTAATTATAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGa                                                                     <  1:2383427/128‑1 (MQ=255)

                                                                tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAACCCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCTAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               >  1:1176223/1‑128 (MQ=255)

                                                                tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAATTGGTGATATTTAGATCTg                                                                 >  1:3100769/1‑128 (MQ=255)

                                                                tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAATCGATCAGCATAAAATGGAGAAATTTAGATCTGAgat                                                             >  2:853289/1‑126 (MQ=255)

                                                                 aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGa                                                                >  1:3654435/1‑128 (MQ=255)

                                                                  aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               <  1:3210197/128‑1 (MQ=255)

                                                                  aaaaaaatATTTTAGCTAATTAAGAAAATAAAAAAAATCAACATTATCAATTTAGATAAA‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               <  1:843911/128‑1 (MQ=255)

                                                                      aaataTTTTATGAAATTAAGCAAAGATAAAAACTACATATTACCTATATAGTTAAA‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTgg                                                           <  2:2902232/128‑1 (MQ=255)

                                                                      aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGAAAGCGAGCAGCATAAAATGGTGAAAATTATATCTTAGTTGGTCtt                                                       >  2:1722599/1‑128 (MQ=255)

                                                                       aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAATAGATCATCATAATATTTTGAATTTTAGATATGTGTTg                                                            >  1:2851353/1‑128 (MQ=255)

                                                                       aataTTTTAGGAAAAGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                      <  1:1137111/128‑1 (MQ=255)

                                                                         tatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                        <  1:2815474/128‑1 (MQ=255)

                                                                           ttttAGGAAATTAAGCAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                        <  1:645175/128‑1 (MQ=255)

                                                                            tttAGTTAATTAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                               <  2:917889/128‑1 (MQ=255)

                                                                            tttAGGAAATTATGAAAACCTAAAACCTCGATATTACCTATAGAGTTTAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                     <  2:1582405/128‑1 (MQ=255)

                                                                            tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCATCATAAAATTGTAATATTTATATCTGAGTTTGTATTat                                                     >  1:3144972/1‑127 (MQ=255)

                                                                            tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATACAAGCGATCAGCAAAAAATGGTGAAATTTAGATCTGAGTTTGTCTTaa                                                     >  1:3937081/1‑128 (MQ=255)

                                                                             ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCTAGAGATCAGCATATAATGGTGATATTTAGATCTGAGTTGttatta                                                      >  1:1787023/1‑128 (MQ=255)

                                                                                 gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTATAGCGATCAACATAATATGGAGAAATATATATCTGAGTTAGTCTTATATTTg                                                >  1:197106/1‑128 (MQ=255)

                                                                                  aaaTGAAGCAAAGCAAAAACCTCCATAATACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                               <  1:2764677/128‑1 (MQ=255)

                                                                                   aaTGAAGAAAAGAAAAAAACTCCATATAACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                              <  2:1449050/128‑1 (MQ=255)

                                                                                    aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCTATCATCATAATATGGTGAATTTTATATCTGAGTTGTTATTATATTTGt                                               >  1:3490724/1‑128 (MQ=255)

                                                                                     ttaagctatgcaAAAACCTCGATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                            <  2:196052/126‑1 (MQ=255)

                                                                                     tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                            >  1:3018269/1‑128 (MQ=255)

                                                                                         taaaataaaaaaaCTCAATATTACATATAGAGATAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttttt                                        <  1:486226/121‑1 (MQ=255)

                                                                                         gcaaagcaaaAACCTCCATATTACCTATAGAGTTTAA‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAATAAAGCTAAGATAATAAAATGCTTAATTTTATATCTTAGATGTTCTAATAttaatattttat                                        >  2:2072267/1‑118 (MQ=255)

                                                                                           aaagcaaaAACCACCATATAAACTATAGAGTTTAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                      <  1:420454/128‑1 (MQ=255)

                                                                                            aagcaaaAAACTCCATATTACATATAGAGTTAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                     <  1:2153479/128‑1 (MQ=255)

                                                                                             acaaaaaaCATCCATAATAACTATAGAGATAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                    <  2:233597/125‑1 (MQ=255)

                                                                                              gcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCATCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTAGTAGTGTAtatatata                                 >  2:3381168/1‑128 (MQ=255)

                                                                                               caaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATAT‑T‑CTAGCGATCAGCATAAATTGGTGAAATTTATATCTGAGTTGGTCTTATTTTTGTAGTTTTTTTTTATAg                                >  2:2843652/1‑128 (MQ=255)

                                                                                                 aaaaCCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGAGATCATCATAAAATTGTGATATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                >  2:685509/1‑128 (MQ=255)

                                                                                                   aaCCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                <  2:1148316/128‑1 (MQ=255)

                                                                                                       tcaatattataaataGAGATAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                          <  1:2320051/116‑1 (MQ=255)

                                                                                                       tCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaa                        >  2:37833/1‑128 (MQ=255)

                                                                                                       tCCATATAACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                          <  1:3343947/128‑1 (MQ=255)

                                                                                                        ccATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAATCGATCAGCATAAAATGTTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtatat                         >  1:796552/1‑127 (MQ=255)

                                                                                                        ccATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATA‑‑AAAGCGAACAAAAAAAAATTGTAATATATATATCTGAGTGGGTCATAAATTTCTTTTTTTTATTTATATTTTATaata                       >  2:3711284/1‑126 (MQ=255)

                                                                                                         cATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGATATTGTATTAAATTTGTAGTTTATATTTATAGTTTATAAAga                      >  1:1089433/1‑127 (MQ=255)

                                                                                                          atatTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCTAGCGATCAGCAAAAATTGGTGAAATTTAGATCTGATTGTGTGTTATATTTGTAGTTTTTATTTATAGTTtatattg                       >  2:257992/1‑125 (MQ=255)

                                                                                                            aatACCTATAGAGAGAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATAT‑T‑TATATGCAAGCGATCAGCATAAAATGGAGAAATTTAGATCTGAGTTGGTCTTAATTTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                   <  1:912568/126‑1 (MQ=255)

                                                                                                                     agagTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  1:2243375/128‑1 (MQ=255)

                                                                                                                      gagTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt             <  1:3543274/128‑1 (MQ=255)

                                                                                                                       atttAAT‑‑‑‑T‑‑‑‑TTATATATATATATATATATATATATATGCAAGCGATCAGCATAATATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa          <  2:2498816/126‑1 (MQ=255)

                                                                                                                       agTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTAGa          >  2:3649422/1‑128 (MQ=255)

                                                                                                                         ttAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTATATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt        >  1:1353043/1‑128 (MQ=255)

                                                                                                                            aT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCACCATAAAATGGTGATATTTATATCTGAGTTTGTCTATAATTTGTAGATTTTATTTATAGTTTATATATTTAATATTTTATAttttt     >  1:295441/1‑128 (MQ=255)

                                                                                                                             t‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTTATAATATATATTTTTa    >  2:1486038/1‑128 (MQ=255)

                                                                                                                             t‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa    >  1:3432456/1‑128 (MQ=255)

                                                                                                                              taatgatatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg           <  2:415998/119‑1 (MQ=255)

                                                                                                                              gttaatgatatatatatatatatatatatatatatatGAAAGCGATCATCATAAAATTGTGAAATTTAGATCTGTGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTat           >  2:3452661/10‑127 (MQ=37)

                                                                                                                                 ataaatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt        <  2:122626/122‑1 (MQ=255)

                                                                                                                                     atatatatatatatatatatatatatatatGCTAGAGATCAGAATAAAATTGTGATATATATATCTGAGTTTGTGTTAAATTTGTATTTTTTATATATATTTTATAAAGTTAAAATTATATAtttttt    >  1:740927/3‑127 (MQ=255)

                                                                                                                                     atatatatatatatatatatatatatatatGCAAGAGATCATCATAAAATGGTTATATTTATATCTGAGTTTGTCTTAAATTTTTATTTTTTATTTATATTTTATAAATATAATAATTTATATTTTTa    >  2:620102/3‑128 (MQ=255)

                                                                                                                                      tatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa   <  1:950494/127‑1 (MQ=255)

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.