New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 203895391 (0.290)214 (0.140)
+TTT
65/214 24.1 32.7% intergenic (+279/+179) JCVSYN2_00845/JCVSYN2_00850 lipoprotein/inorganic diphosphatase
?CP016816 203896 = 453 (0.290)intergenic (+280/+178) JCVSYN2_00845/JCVSYN2_00850 lipoprotein/inorganic diphosphatase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 666 total aligned reads displayed.

TTTTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAT  >  CP016816/203767‑204017
                                                                                                                                       |                                                                                                                                 
 tttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTg                                                                                                                                   >  2:2858613/1‑128 (MQ=255)
 tttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑ATTg                                                                                                                                   >  2:901755/1‑128 (MQ=255)
 tttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTATCAAAGTGTAGTTTTTAGG‑‑‑CTTg                                                                                                                                   >  2:2104124/1‑128 (MQ=255)
  ttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACTCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑t                                                                                                                               >  2:2218846/1‑128 (MQ=255)
      ttttttttATAAAAAAAATTAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑tttttt                                                                                                                         >  2:1766827/1‑128 (MQ=255)
      ttttttttAAAAAAAAAATTAAAATTTTTCATTTAAAGCCTTTTGTAAAAAAGCCTATGTTCTAGGATTTTTATTATACTTATAAAAATTACAACGCTTTCAAAGTTTATTTTGTAGG‑‑‑CTTG‑‑‑tgttat                                                                                                                         >  2:139304/1‑126 (MQ=255)
       tttttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTTTAAAAAATCCTATGTTCTAGGCTTTTTATTATAAATATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑tttttt                                                                                                                         <  2:3081765/128‑1 (MQ=255)
           tttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑tttttttttt                                                                                                                     >  1:3206399/1‑128 (MQ=255)
           tttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTAGTAAAAAAGCCTATGTTCTAGGCTTTTTATAATACTTATCAAAATTACAACTCTTTCAAAGTGTATATTTAAAG‑‑‑CTAG‑‑‑tttttttttt                                                                                                                     >  1:208495/1‑128 (MQ=255)
           tttATAAAAAAAAATAAAAAATTTTAATATAAACCCCATTTTAAAAAATCCTATGTTCTATGGTTTTTATTATAAATATAAACATTACAACCCTTTAAAACTGTAATTTTTAGG‑‑‑CTtt‑‑‑tttttttttt                                                                                                                     <  2:2163239/128‑1 (MQ=255)
            ttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTCGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑ttttttttttt                                                                                                                    >  2:1864110/1‑128 (MQ=255)
              tataaaaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCATATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑ttttttttttttt                                                                                                                  >  1:356441/4‑128 (MQ=255)
                aaaaaaaaaTAAAAATTTTTCATTTAAATCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAACTGTATTTTTTAGG‑‑‑CTTG‑‑‑ttttttttttttttt                                                                                                               <  2:1184485/128‑1 (MQ=255)
                   aaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑tttttttttttttttttt                                                                                                            >  2:3129666/1‑126 (MQ=255)
                   aaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑tttttttttttttttttg                                                                                                            >  2:3237781/1‑126 (MQ=255)
                   aaaaaaTAAAAATTTTTAATTTAAACCCATTTTTAAAAAAGCCTATTTTCTAGGCTTTTTATTATAATTTTCAAAATTAAAACGCTTTAAAATTTTATTTTTTAGG‑‑‑GTTG‑‑‑tttttttttttttttttt                                                                                                            <  1:190056/128‑3 (MQ=255)
                    aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑ttttttttttttttttttt                                                                                                           >  2:2728371/1‑125 (MQ=255)
                    aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑ttttttttttttttttttt                                                                                                           >  1:2562579/1‑125 (MQ=255)
                      aaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAATGTGTATTTTTTAGG‑‑‑CTTG‑‑‑tttttttttttttttttttaa                                                                                                         >  1:2898660/1‑123 (MQ=255)
                        ataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGC‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTaaaa                                                                                                        >  1:773572/1‑128 (MQ=255)
                          taaaatTTTTTATTTAAAACAATTTGTAAAAAATGATATGTTCAAGGCTTTTTATTATACTAATCAACATTACAACGCTTTCAAATTGTATTTTTTAGG‑‑‑CTTG‑‑‑ttttttttttttttttttgtaaaaa                                                                                                     <  1:2607542/127‑10 (MQ=255)
                          aaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGT‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAAt                                                                                                      >  1:389158/1‑128 (MQ=255)
                          aaaaatTTTTATTTAATTCCATTTTTTAAAAACTATTTTTTATTGTCTTTTTTTTTTAAATATAAAAATTTCAACGCGTTCAAACTTTTTTTTTTATG‑‑‑GTtt‑‑‑tttttttttttttttttttgtaaaaa                                                                                                    <  1:990419/128‑11 (MQ=255)
                          aaaaatTTTTATTTAAAGCCAATTGTAAAAAACCCTATTGTATATGCTTTTTATTATAATTATCAAAAATAAAACGCTTTCAAATTGTATTTTTTTTG‑‑‑GTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                     <  1:3250819/128‑1 (MQ=255)
                           aacttttttCATTTAAAGCCATATTTAAAAATTTCTATTTTTTTGTCTTTTTATTATACTTATTAACATTACAACGCTTTCAAAGTGTATTTTTTTTG‑‑‑GTTG‑‑‑TTTATTTTTTTTTTTTTGTAAAAATa                                                                                                     <  2:1612400/124‑1 (MQ=255)
                           aaaatTTTTTATTTAAATTTATTTTTATAAAATAATTTGTTATTTTTTTTTTTTTATAATTATTAAAATTAAAAATTTTTTAATGTTTATTTTTTTTTG‑‑‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                     <  1:177585/128‑1 (MQ=255)
                           aaaatTTTTTAATTAAACCCATTTTTAAAAAATCCATTGTTATATGCTTTTTATTTTAAATATAAAAATTACAACCCTTTCAAACTTTTTTTTTTAGGG‑‑‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                     <  2:2616980/128‑1 (MQ=255)
                           aaaatTTTTCATTTAAACCCATTTTTAAAAAAACCTATTTTTATGGCTTTTTTTTATAATTTACAAAATTACAAACTTTTTAATTTGTTTTTTTTTTG‑‑‑CTTGTTTTTTTTTTTTTTTTTTGTAAAAAt                                                                                                      <  1:245619/128‑1 (MQ=255)
                           aaaatTTTTCATTAAAAGCCAATTGTAAAACAGCCTATGTTCTAGGCTTTTTATTATACTTATCAAAATTACAACGCATTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                     <  2:1245262/128‑1 (MQ=255)
                            aaatTTTTTTTTTTAATAAATTTTTATAAAGTCCTATTGTTTTGGTTTTTTTTTATAATTATCAACTTATAAAAGGTTTAAAATTGTTTTTTTTTGGGTTTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                     <  1:3285055/128‑1 (MQ=255)
                             tatTTTTCATTTAAACCAATTTGTAATAAAGACTATGTTCTTGGTTTTTTATTATTCTTATCAAAATTAAAACTCTTTCAAATTTTATTTCTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATaaa                                                                                                   <  2:1066677/127‑1 (MQ=255)
                             aatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTTTACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATaaaa                                                                                                  >  2:2454054/1‑128 (MQ=255)
                             aatTTTTATTTTAAATCCATTTTTAAAAACCCCTTTTTTCTAGGCTTTTTATTATAATTATAAACAAAACAACGCTTTAAAATTTTATTTTTTAGG‑‑‑GTTGTTTTTTTTTTTTTTTTTTGTAAAAATaa                                                                                                    <  1:3076642/128‑1 (MQ=255)
                               tttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTATAAAAATAAAAGt                                                                                                >  2:482417/1‑128 (MQ=255)
                                ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGTTTTTTTTTTTTTTTTTTGTTAAAATAAAAg                                                                                                 >  2:1122188/1‑128 (MQ=255)
                                ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATaaaata                                                                                                >  2:2992060/1‑126 (MQ=255)
                                 ttttATTTAAATTCATTTTTAAAAAAGAATATGTTATATTGTTTTTATTATACTTATAAAAATTAAAACGCTTTCAAAGTGTTTTTTTTATG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTa                                                                                               <  1:1524944/128‑1 (MQ=255)
                                 tttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAAAAAAAGTa                                                                                               >  1:2724573/1‑128 (MQ=255)
                                  ttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTCT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTaa                                                                                              >  1:1207727/1‑128 (MQ=255)
                                     aTTTAAATCCATTTTTAAAAAATCCTATTTTCTATGCTTTTTATTATAATTATCAACATTACAACGCATTCAAAGTGTATTTTTTAGG‑‑‑CTTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGAt                                                                                           <  2:3316020/128‑1 (MQ=255)
                                     aTTTAAAGTCATTTGTATAAAAGCTAATGTTCTATGTATTTTATTATACTAATCAACATTAAAACGCTTTCAAAGTGTATTTTTTTGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGAtt                                                                                          <  1:2987020/128‑1 (MQ=255)
                                      tttAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTTAAAAAAAAAATTAAAttt                                                                                         >  1:881725/1‑128 (MQ=255)
                                       tttaattaaTTTTTAAAAATTCCTATGTTTTATTATTTTTATTATAATTATAAACATTACAACGCTTTCAAATTGTTTTTTTTATG‑‑‑C‑‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGAt                                                                                    <  1:1981640/120‑1 (MQ=255)
                                       ttAAATCCATTTGTAAAAAAGACTTTTTTTTTTGTTTTTTATTATAATTATAAACATTAAAACGCTTTAAAATTGTATTTTTTTGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGAttt                                                                                         <  1:1095355/128‑1 (MQ=255)
                                        tAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTAAAAATAAAAGTAAGATTTTGa                                                                                      >  2:1939406/1‑128 (MQ=255)
                                          aaGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGT‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTATAAAAAAAAAATAAATAttttaa                                                                                      >  1:2536582/1‑125 (MQ=255)
                                           aGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGT‑‑‑CTTGTTTTTTTTTTTTTTTTTTTTAAAAATAAAATTAAGTTTTGGa                                                                                      >  2:776055/1‑128 (MQ=255)
                                           aGCAATTTTTAAAATAGCCTATGTTTTTTGTTTTTTATTATAATTTTAAAAATTAAAACGCTTTAAATTTTTTTTTTTTAGGGTTTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGa                                                                                      <  1:927540/128‑1 (MQ=255)
                                           aGCAATTTGTAAAAAAGCAGATTTAATAGGCTTTTTATTATAATTATCAACATTACAACTCTTTCAAAGTTTATTTTTTATG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGAt                                                                                    <  1:2923877/128‑1 (MQ=255)
                                            gtcATTTGTAAAAAATCATATGTTCTAGGCTTTTTATTATACTTATCAAAATTACAACTCTTTCAAAGTGTATTTTTTATG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCa                                                                                  <  2:2640357/126‑1 (MQ=255)
                                            gCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAATAATAttttatta                                                                                    >  2:535608/1‑123 (MQ=255)
                                              cATTTGTAAAAAAGCCTATGTTATCGGGTTTTTATTATACTTATCAACCTTACAACCGTTTCAAAGTGTATTTTTTTGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAAc                                                                               <  1:227363/128‑1 (MQ=255)
                                                ttttttaaaaaTCTTATTTTTTTGGATTTTTATTATAATTATAAACATTAAAACGTATTAAAATTGTTTTTTTTAGGGTTTTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCaa                                                                                <  1:233348/122‑1 (MQ=255)
                                                   gTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGGATCAACCaaaa                                                                          >  2:69146/1‑128 (MQ=255)
                                                    tAAAAAATCCTTTGGTTTAGGTTTTTTATTATAATTATCAACATTAAAACGCTTTAAAATTGTTTTTTTTTTG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAAc                                                                         <  1:3124660/128‑1 (MQ=255)
                                                     aaaaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTTAAAATAAAATTTATATTTGGATTCAACAaaaa                                                                          >  1:282977/1‑128 (MQ=255)
                                                     aaaaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGAAAATCTAATAGAATGATTTGGATCAACaaatcat                                                                        >  1:2156642/1‑124 (MQ=255)
                                                           gCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATATTTGTATAAACCAAAAAtaaaaa                                                                   >  1:811236/1‑124 (MQ=255)
                                                           gCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTTGTTAAAACAAAACTATTTc                                                                   >  2:2571626/1‑128 (MQ=255)
                                                               attttttttgCTTTTTATTATTTTTAATAAAATTATAATGTTTTTAATTTTTATTTTTTATG‑‑‑TTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGTTCAACCAAAACTATATCaaaaa                                                              <  1:2638780/119‑1 (MQ=255)
                                                                 ttattAGTCTTTTTTTTATATTTATTAAAATTTCAACTTTTTTTAATTTTTTTTTTTTTG‑‑‑TTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCaaaaaaa                                                            <  1:1158371/124‑1 (MQ=255)
                                                                   tCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATTAAATTTATTTTTTGATAAACCAATACTAAATCAAAAAAAt                                                           >  2:319667/1‑128 (MQ=255)
                                                                   catAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAATGTAAGTTTGGAAGACACCAAAAGAATTACaaaaaatt                                                           >  2:1673192/3‑126 (MQ=255)
                                                                   catAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTAATATTTGTTTCAACCAAAACTATATAAAAAAAAtt                                                          >  2:1303362/3‑128 (MQ=255)
                                                                    atAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTGGAACAACCAAAACTATATCAAAAAAATTa                                                         >  2:1158371/2‑128 (MQ=255)
                                                                      aGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAATTAAAATTAAGATTTGGATCAACCAAAACTATTTAAAAAAAtttta                                                        >  1:3307777/1‑126 (MQ=255)
                                                                       ggCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTGGAAAAACCAAAAAAAAATCAAAAAAAATaaa                                                       >  2:2920904/1‑128 (MQ=255)
                                                                        tcTTTTTTTTATAAATATAAAAATTAAAACTTTTTAAAATTTTATTTTTTATGT‑‑‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaaa                                                      <  1:2519504/127‑1 (MQ=255)
                                                                         cTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAAATAATATTTTTTTCAACAAAAAATAAAAAAAAAAAAATaaaaa                                                     >  2:2680349/1‑128 (MQ=255)
                                                                           ttttttttTAATTATTAACATTAAAAATTTTTAAAATTTTTTTTTTTTGG‑‑‑CTTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaaaaaa                                                   <  2:2754331/128‑1 (MQ=255)
                                                                           ttttATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAAATTTTGATAAACCAAAAAAATATAAAAAAAATTaaaaaaaa                                                  >  2:2833140/1‑128 (MQ=255)
                                                                                  ataCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTTAAAATAAAATTAAAATTTGTATCAACCAAAAATATATAAAAAAAATTAAAAAAAAaaattt                                            >  1:2968002/1‑128 (MQ=255)
                                                                                    aCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGTCTGACCCAACACTTTATACAAAAAATTTATAAAAAtagtttag                                          >  1:1055499/1‑128 (MQ=255)
                                                                                    aCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAAAAAAATTAAGATTTTTTACAACCAAAAATAAAACAAAAAAAATaaaaaaaaatatttat                                          >  1:302107/1‑120 (MQ=255)
                                                                                        aTCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTATTTTTAAAAATAAAATAAAAATTTGAATAAACAAAAAATATAAAAAAAAAATTAAAAAAAAaattttatattt                                      >  2:809765/1‑123 (MQ=255)
                                                                                          cAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAATAAAATTTTTAAAAACCAAAAATTAATAAAAAAAATTAAAAAAAAtattttattttat                                     >  1:1605980/1‑125 (MQ=255)
                                                                                              aTTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAATAAAATTTTTATAAACCAAAAATATATAAAAAAAATTAAAAAAAAAattttattttatttta                                 >  2:2364197/1‑127 (MQ=255)
                                                                                                tACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGTTTTTTTTTTTTTTTTTTTTAAAAAAAAAATTAAAATTTTGAAAAACCAAAAATATATAAAAAAAATAAAAAAAAAATGTTTAGTTgtatttaaa                               >  1:1143313/1‑120 (MQ=255)
                                                                                                tACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTTATATTTTGATAAACAAAAAAAATATAAAAAAAATTAAAAAAAAtatttttgttttttttaaaa                              >  1:2779054/1‑118 (MQ=255)
                                                                                                tACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAAATAAATTTTGTTCAAACAAATCAATATAAAAAAAATATAAAAAATtaatttaatttatttataat                              >  1:673224/1‑118 (MQ=255)
                                                                                                tACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTAAAATTTTTATCAAACAAAAATATATAAAAAAAATTAAAAAAAAaattttattttatattaaaa                              >  2:169726/1‑118 (MQ=255)
                                                                                                tACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAATAATATTTGGATCAAACAAAAATATATCAAAAAAATTAAAAAAAAAATTTTAGTTTAATTTaaaa                              >  2:104076/1‑128 (MQ=255)
                                                                                                 aCAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAATTTTGGATCAACCAAAAATATATAAAAAAAATTAAAAAAAAAAATTTATTTTATTTTaaaaa                             >  2:1495531/1‑127 (MQ=255)
                                                                                                    aCGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAGATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATAGTTTTTTTGAGTTTCAAAtattc                         >  2:3277912/1‑124 (MQ=255)
                                                                                                      gCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTTGATAAACCAAAAAAATATCAAAAAAATTAAAAAAAAAATTTTATTTTATTTTaaaaaaagaa                        >  1:2671965/1‑122 (MQ=255)
                                                                                                         ttCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATATTTTGTTAAAACAAAAATATATGAAAAAAATTAAAAAAAAAATTTTATTTAATATTAAAATATGCaaat                     >  2:1556589/1‑128 (MQ=255)
                                                                                                          tCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAATATTTGGAAAAACCAAAACAATAAAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATGAGCaaata                    >  1:1724953/1‑128 (MQ=255)
                                                                                                          tCAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTTGATCAACCAAAAATATATCAAAAAAATTAAAAAAAATAGTTTATTTTATTTTCAAATATGCatata                    >  2:2015971/1‑128 (MQ=255)
                                                                                                           cAAAGTGTATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTTGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATATTTTTTTTGAGTTTAAAATATgaaatata                   >  2:2718278/1‑121 (MQ=255)
                                                                                                            aatgtgtTTTTTTTTGG‑‑‑CTT‑‑‑TTTTTTATTTTTTTTTGTAAAAATAATAGTAAGATTTGGATCATCCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTGCAAATCTGCATATATAGt                <  2:2542233/125‑1 (MQ=255)
                                                                                                             atttgtTTTTTTTATG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAg                 <  2:2967781/125‑1 (MQ=255)
                                                                                                                tgtatttttttTGT‑‑‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTAc              <  1:2693973/123‑1 (MQ=255)
                                                                                                                 gtATTTTTTAGG‑‑‑CTTGTTTTTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGGATAAACCAAAAATATTAAAAAAAAATTAAAAAAAAAATTTTATTTTATTTTAAAATCAGCATATATATTa               >  2:415283/1‑128 (MQ=255)
                                                                                                                 gtATTTTTTAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAGATTTGGTTCAACCAAAACTATATAAAAAAAATTAAAAAAAAAAGTTTTTTTTAGTTTAAAATGTGCAAATATATTaaa             >  1:1674792/1‑126 (MQ=255)
                                                                                                                  tttttttttTGA‑‑‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACaa            <  1:829617/125‑1 (MQ=255)
                                                                                                                     ttttttAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAATTATTTTAGTTTATTTTCAAAAATGCATATTAATTACAAAg          >  2:2329040/1‑128 (MQ=255)
                                                                                                                       ttttAGG‑‑‑CTTGTTTTTTTTTTTTTTTTTTTTAAAAATAAAATTAAGATTTGGATCAACCAAAAATTTTTAAAAAAAATTAAAAAAAATTGTTTTTTTTATTTAAAAATATGAAAATATAGTAaaaatg         >  2:378890/1‑126 (MQ=255)
                                                                                                                        tttAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAAAAAAAGTAAGATTTGGATAAACAAAAACTATATCAAAAAAATTAAAAAAAATAGTTTATTTTAGTTTAAAAAATTAATATATAGTAAAAAGTAAt      >  2:2486469/1‑128 (MQ=255)
                                                                                                                        tttAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAAATTTTAGTTAAGTTTAAAAACTGAAATAAAAGTAAAAAGGAAtt     >  2:629911/1‑128 (MQ=255)
                                                                                                                          tAGG‑‑‑CTTGT‑‑TTTTTTTTTTTTTTTTGAAAAAAAAAAATTAAGATTTGGATAAACCAAAAAAAAATAAAAAAAATAAAAAAAAATAGTTTATTTAATTTACAAAAATGCATATAAATTAAAAAAGaaat     >  2:3032325/1‑126 (MQ=255)
                                                                                                                                       |                                                                                                                                 
TTTTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGG‑‑‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAT  >  CP016816/203767‑204017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.