Predicted mutation
evidence seq id position mutation annotation gene description
JC CP016816 311,173 Δ4 bp intergenic (‑96/‑215) JCVSYN2_01300 ← / → JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =184 (0.120)695 (0.550) 181/208 1.4 82.5% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 144 (0.110)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

Only 100 of 1063 total aligned reads displayed.

TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTT  >  CP016816/311021‑311274
                                                                                                                               |                                                                                                                              
 gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACTCACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATt                                                                                                                               <  2:610786‑M2/128‑2 (MQ=255)
 gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACAATCATt                                                                                                                               <  2:1965553‑M2/128‑2 (MQ=255)
 gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATAATACATACATTCATt                                                                                                                               <  2:1767790‑M2/128‑2 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtat                                                                                                                             <  2:559623‑M2/128‑4 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAAATTTTTCATTTTACACACCCCTTATTAAAAAATAAAATAATTGTTACATACTATTCAACACATATATAACATACATTAATtat                                                                                                                             <  2:2087866‑M2/128‑4 (MQ=255)
        ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAACACATATATAACATACATTCATtatatata                                                                                                                        <  1:1331023‑M2/128‑9 (MQ=255)
        ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatata                                                                                                                        <  2:1844626‑M2/128‑9 (MQ=255)
        ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatata                                                                                                                        <  2:2426961‑M2/128‑9 (MQ=255)
        ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATaatatata                                                                                                                        <  2:1712860‑M2/128‑9 (MQ=255)
        ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACAACCCTTATTAAAAAATAAAAAACTTTTTACATACGATTCAAAAACTATAAAACATACATTCATtatatata                                                                                                                        <  2:2271442‑M2/128‑9 (MQ=255)
          gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatata                                                                                                                      <  2:1119187‑M2/128‑11 (MQ=255)
               aaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatat                                                                                                                 <  1:2795196‑M2/128‑16 (MQ=255)
                aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatata                                                                                                                <  1:1095730‑M2/128‑17 (MQ=255)
                   aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatat                                                                                                             <  1:2447094‑M2/128‑20 (MQ=255)
                   aaTACAAATGAAATTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAAATTCATtatatatatatatatatat                                                                                                             >  1:3001723‑M2/1‑109 (MQ=255)
                    aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatata                                                                                                            <  2:310305‑M2/128‑21 (MQ=255)
                     taaaaattaaaatAAAATTGTTATTAACTTTTTAATTTTACACACACCTTATTAAAAAATATAATACTTTTTATATACTATTCAAAAAATATATAAAATACATTCATtatatatatatatatatatat                                                                                                           <  1:469743/116‑1 (MQ=255)
                     tCCTAATTAACTTAATATTGTAATTAAATTTTTAATTTTAAACACCAATTATTAAAAAATAAAATAATTTTTAAATACGATTAAAAATATATATCAAATACATTCATtatatatatatatatatatat                                                                                                           <  2:662041/128‑1 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatat                                                                                                           <  2:3303825‑M2/128‑22 (MQ=255)
                      ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatata                                                                                                          <  2:1894408‑M2/128‑23 (MQ=255)
                      ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataat                                                                                                          <  1:258352‑M2/128‑23 (MQ=255)
                       cAAATGAACTTAAAAATGTAATTAACTATTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataa                                                                                                         >  2:2633792‑M2/1‑105 (MQ=255)
                         aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTAATTAAAAAAAAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatataatgaatgta                                                                                                       >  2:2319409‑M2/1‑103 (MQ=255)
                          ttgatattAATATTGTTATTAACTTTTTAATTTTACAAACCCCTTATTAAAAAATAAAATAATTTTTATATAAGATTAAAAAAATATATATAATAAATTAATtatatatatatatatatatataatgc                                                                                                      <  1:2265379/122‑5 (MQ=255)
                          attaaattAAAATTTTTATAAACTTTTTCATTTTAAACAAAAATTATTAAAAAATAAAATAATTGTTACATAATATTAAAAACATATATAACATACATTCATtatatatatatatatatatataatgc                                                                                                      <  2:2346421/122‑5 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaagaa                                                                                                     <  2:1459946‑M2/128‑28 (MQ=255)
                            gAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaa                                                                                                    <  2:2682575‑M2/128‑29 (MQ=255)
                             aaCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaat                                                                                                   >  2:2399104‑M2/1‑99 (MQ=255)
                              aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatcaaata                                                                                                  <  2:827798‑M2/128‑31 (MQ=255)
                               cTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatat                                                                                                 >  2:2716941‑M2/1‑97 (MQ=255)
                               cTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTAATTAAAAAATAAAATACTTGTTAAATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatat                                                                                                 >  1:2302622‑M2/1‑97 (MQ=255)
                               attaAAATTGTAATTAACTTTTTCATTTTAAACACACCTTATTAAAAAATAAAATACTTTTTAAATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatat                                                                                                 >  1:2414415‑M2/2‑97 (MQ=255)
                                ttAAAATTGTAATTAACATTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatg                                                                                                >  2:1669012‑M2/1‑96 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatttaa                                                                                             <  1:2094098‑M2/128‑36 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattaaatatataa                                                                                             <  1:567686‑M2/128‑36 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaa                                                                                             <  2:3020043‑M2/128‑36 (MQ=255)
                                    aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATAAATAACATACATTCATtatatatatatatatatataaaattaaatatttaaa                                                                                            <  2:1635238‑M2/128‑37 (MQ=255)
                                       tttatTTAACTTTTTCATATTACACACCCCTTTTTATATAATAAAATACTTGTTACATAAGATTCAAAAAATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatga                                                                                         >  1:1435588‑M2/3‑89 (MQ=255)
                                         tAATTAACTTTTTCAATTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaa                                                                                       >  2:2218780‑M2/1‑87 (MQ=255)
                                          aaTTATCTTTTTCATTTTACACAAACATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAAAATATATAACATAAATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaa                                                                                      >  1:249471‑M2/1‑86 (MQ=255)
                                          aaTTAAATTTTTCATTTTAAACAAATCTTATTAAAAAATAAAATAATTTTTATATAAGATTCAAAAAATATATAAAATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaa                                                                                      >  1:1587877‑M2/1‑86 (MQ=255)
                                             tAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGAAATATATATATAAAAat                                                                                 >  1:2171500/1‑128 (MQ=255)
                                              aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgaaatatgtaaattaaaatatg                                                                                  <  1:3290766‑M2/128‑47 (MQ=255)
                                              aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaatcaatatgtaaatgaaaatatt                                                                                  <  2:12205‑M2/128‑47 (MQ=255)
                                              aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatataaatataattcaataattaaatgaaaatata                                                                                  <  1:1467612‑M2/128‑47 (MQ=255)
                                               tatttttcaTTTTAAAAACCACATATTAAAAAATAAAATAATTGTTACATACTATTCAAAACATATATAAAATAAATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatgg                                                                                 >  1:1967834‑M2/3‑81 (MQ=255)
                                               aatttttcaTATTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggta                                                                                 >  1:899035‑M2/3‑81 (MQ=255)
                                               aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatataaatgataatatgt                                                                                 <  2:2862293‑M2/128‑48 (MQ=255)
                                                   tttCATTTTACACACCCCTTATTAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataata                                                                            >  2:14177‑M2/1‑76 (MQ=255)
                                                     tCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatag                                                                           >  1:1700863‑M2/1‑75 (MQ=255)
                                                       aTTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatag                                                                         >  1:2654265‑M2/1‑73 (MQ=255)
                                                        ttttACACACCCCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATATCATACATTGAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataata                                                                      <  2:1525372/128‑1 (MQ=255)
                                                        ttttAAACACAACTTATTAAAAAATAAAATAATTTTTACATACGATTCAAAACATATATAACATAAATTAATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagc                                                                        >  1:816845‑M2/1‑72 (MQ=255)
                                                          ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatgtatattaaaatattttataatagaaa                                                                      <  1:3174745‑M2/128‑59 (MQ=255)
                                                             cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatttaaatgaaaatatggtataatagcaacct                                                                   <  1:980059‑M2/128‑62 (MQ=255)
                                                                 ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaagcaatatgtaaatgaaaatatggtataatagcaacatttta                                                               <  2:485622‑M2/128‑66 (MQ=255)
                                                                 ccccTTATTAAAAAATAAAATAATAGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgttta                                                               >  1:1923053‑M2/1‑63 (MQ=255)
                                                                 cacattattaaaaaATAAAATAATTGTTATATAATATTTAATACATATATAAGATAGATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgttta                                                               >  2:255459‑M2/5‑63 (MQ=255)
                                                                   ccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatatttcaatatgtaaatgaataaattctataatagccaaccttaaaa                                                             <  1:2921024‑M2/128‑68 (MQ=255)
                                                                   ccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaa                                                             <  2:276285‑M2/128‑68 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatgttataatagcaaccgtttataaag                                                          <  1:510584‑M2/128‑71 (MQ=255)
                                                                        ttaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattaaatatttaaattaaaatatggtataatagaaaccttttataaatta                                                        <  1:2044164‑M2/128‑73 (MQ=255)
                                                                          ataatataaaataaTTGTTACATAAGATTAAAAAAATATATAACATAAAATCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaa                                                      >  1:3052592‑M2/3‑54 (MQ=255)
                                                                            aaaataaaatACTTTTTACATAAGATTAAAAACATATATAAAATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaa                                                    >  2:1583001‑M2/1‑52 (MQ=255)
                                                                              aataaaataCTTTTTACATAATATTAAAAACATATATAACATAAATTAATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaa                                                  >  2:90696‑M2/1‑50 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgataatatggtattatagcaacggtttataaagttaaaaaa                                                  <  1:1249626‑M2/128‑79 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaacagtttatatagtaaaaaaa                                                  <  2:1174718‑M2/128‑79 (MQ=255)
                                                                                taaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatttaaatgaaaatatgttataatagcaacagtttataaagtaaaaaaata                                                <  1:2832706‑M2/128‑81 (MQ=255)
                                                                                taaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaata                                                <  1:3229500‑M2/128‑81 (MQ=255)
                                                                                  aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatatt                                              <  1:1786114‑M2/128‑83 (MQ=255)
                                                                                      aCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatgtaaattaaaatatgttataatagcaaccgtttataaagtaaaaaaatagtaaat                                          <  1:3142230‑M2/128‑87 (MQ=255)
                                                                                      aCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatattaaat                                          <  1:630576‑M2/128‑87 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaataa                                        >  1:2724497‑M2/1‑40 (MQ=255)
                                                                                        ttGTTACATAAGAATCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                      <  2:3050188/128‑1 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaattaaaatatggtataatagcaaccgtatataaacttaaaaaatagaaaataaa                                       <  1:2374563‑M2/128‑90 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaagcaatatgtaaatgaaaatatggtataatagcaaccttttataaagtaaaaaaatagaaaatata                                       <  1:377051‑M2/128‑90 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatattct                                       <  1:1155281‑M2/128‑90 (MQ=255)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccttttataaagtaaaaaaatagtaaatatacta                                    <  1:101753‑M2/128‑93 (MQ=255)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgaaatatgtaaatgaaaatattctataatatcaaccgtatataaagtaaaaaaatagtaaatatacta                                    <  1:3325605‑M2/128‑93 (MQ=255)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaatcaatatgtaaatgaaaatattttataatatcaaaattatataaattaaaaaaatagtaaaaaaaata                                    <  2:1330674‑M2/128‑93 (MQ=255)
                                                                                             aCATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactac                                   <  2:2829558‑M2/128‑94 (MQ=255)
                                                                                                 aatattcAAAAAATATATAAAATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttat                               >  1:1216447‑M2/4‑31 (MQ=255)
                                                                                                      tCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaattaaaatattgtataatagcaacagtttataaagtaaaaaaatagtaaatatactaattatttact                          <  2:319110‑M2/128‑103 (MQ=255)
                                                                                                              tatataACATACATTCATtatatatatatatatatatataatgcaatatttaaatgaaaatatgttataatagcaaccgtttataatataaaaaaataataaatatactaattatttactaataatat                  <  1:687946‑M2/128‑111 (MQ=255)
                                                                                                              tatataACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaat                  <  2:2156637‑M2/128‑111 (MQ=255)
                                                                                                              tatataACATACATTCATTATATATATATATATATATATATAAAGCAATATGTAAATTAAAATATTGTATAATATAAACAGTTTATAAATTAAAAAAATATTAAATATACTTCTTATTTACTAATaaa                >  2:1055594/1‑128 (MQ=255)
                                                                                                               atataACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatataatacttatttacttataaaatc                 <  2:2475392‑M2/128‑112 (MQ=255)
                                                                                                                tataAAATAAATTCTTtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatct                >  2:20048‑M2/1‑16 (MQ=255)
                                                                                                                 ataACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatattgtataatagcaacagtttataaagtaaaaaaatagtaaatatactaattatttactaataaaatcta               <  2:3258914‑M2/128‑114 (MQ=255)
                                                                                                                 ataACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtatataaagtaaaaaaatagtaaatatactacttatttacttataaaaactt               <  1:1392874‑M2/128‑114 (MQ=255)
                                                                                                                    acatacatTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaattaaaaaaatagtaaatatactacatatttactaataaaatctattatt            <  1:2227371‑M2/128‑117 (MQ=255)
                                                                                                                     catacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctatttt           <  2:2923371‑M2/128‑118 (MQ=255)
                                                                                                                      ataaatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctattttt          >  1:1737328‑M2/1‑10 (MQ=255)
                                                                                                                       tacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccttttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctattttta         <  2:3156241‑M2/128‑120 (MQ=255)
                                                                                                                         cattcattatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctatttttatt       >  1:2528734‑M2/1‑7 (MQ=255)
                                                                                                                            tcattatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctatttttatttaa    <  1:761543‑M2/128‑125 (MQ=255)
                                                                                                                            taattatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctatttttatttaa    >  1:1635238‑M2/3‑4 (MQ=255)
                                                                                                                             cattatatatatatatatatatataatgcaatatgtaaatgaaaatattgtataatatcaacagtttataatgtaaaaaaatagtaaatataatacttatttacttataaaatctatttttatttaaa   <  2:757505‑M2/128‑126 (MQ=255)
                                                                                                                             cattatatatatatatatatatataaagaaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacatattaaataataaaatctatatatatttaaa   <  1:186423‑M2/128‑126 (MQ=255)
                                                                                                                              attatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagccaccgtatataaagtaaaaaaatagtaaatatactacttatttactaataatatctatttttatttaaaa  <  1:1534291‑M2/128‑127 (MQ=255)
                                                                                                                               |                                                                                                                              
TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTT  >  CP016816/311021‑311274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.