BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP016816	437,057	C→A	A214S (GCA→TCA)	JCVSYN2_01985 ←	glycosyl transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP016816	437,057	0	C	A	99.7%	3790.1 / NA	1265	A214S (GCA→TCA)	JCVSYN2_01985	glycosyl transferase
Reads supporting (aligned to +/- strand): ref base C (2/0); major base A (646/613); minor base T (2/2); total (650/615)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1298 total aligned reads displayed.

ATCTAAAAACTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGCTGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTTTCTTCTAAATGTT  >  CP016816/436932‑437181

ttCTAAAAACTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTGTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAatgatg                                                                                                                            <  2:168059/127‑1 (MQ=255)

aTCTAAAAACTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAatgatg                                                                                                                            >  2:760012/1‑128 (MQ=255)

    aaaaaCTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAata                                                                                                                        >  1:1272143/1‑128 (MQ=255)

      aaaCTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATAtt                                                                                                                      <  1:2204520/128‑1 (MQ=255)

       aaCTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATAttt                                                                                                                     >  1:251957/1‑128 (MQ=255)

        aCTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTc                                                                                                                    <  2:2345171/128‑1 (MQ=255)

        aCTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTc                                                                                                                    >  1:136327/1‑128 (MQ=255)

         cTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCa                                                                                                                   >  2:1771112/1‑128 (MQ=255)

         cTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCa                                                                                                                   <  1:1463706/128‑1 (MQ=255)

         cTTATAACAAGTTTGATAATAATGAGCATAAGTTAAATGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCa                                                                                                                   <  1:602577/128‑1 (MQ=255)

          ttATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCTAATGATGAATATTTCAt                                                                                                                  >  1:1696438/1‑128 (MQ=255)

          ttATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCAt                                                                                                                  <  1:1314860/128‑1 (MQ=255)

             taACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTAc                                                                                                               >  1:562775/1‑128 (MQ=255)

              aaCAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACt                                                                                                              <  1:178827/128‑1 (MQ=255)

              aaCAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACt                                                                                                              <  2:542160/128‑1 (MQ=255)

                 aaGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTTaa                                                                                                           >  2:29568/1‑128 (MQ=255)

                 aaGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTAAATACAGaa                                                                                                           >  1:462483/1‑128 (MQ=255)

                 aaGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATAATTATTAATTTGTCTAAAATAATTAATAATATGTTGTCATTGTCTTAATAAATCAAATGATGAATATTTAATTACTGaa                                                                                                           >  1:640376/1‑128 (MQ=255)

                  aGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGaaa                                                                                                          >  1:2113193/1‑128 (MQ=255)

                  aGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTCTCTAAAATAATTAATAATATGATGTCATTGTCTTAATAAATCAAATGATTAATATTTCATTACAGaaa                                                                                                          >  2:2219939/1‑128 (MQ=255)

                   gTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAAt                                                                                                         >  2:664436/1‑128 (MQ=255)

                    tttGATAATAAAGAGCATAAGTTAATTGCTCACTAAGAAGTTTATATTTATTAATTTCTCTAAAATAATTAATAATATGTGTTCATTGTCTTAATAAATCAAATCATGAATATTTCATTACTGAAAtt                                                                                                        >  1:288089/1‑128 (MQ=255)

                           ataatGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTa                                                                                                 >  1:1000301/1‑128 (MQ=255)

                              atGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATg                                                                                              >  1:2236194/1‑128 (MQ=255)

                               tGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGa                                                                                             >  2:2374533/1‑128 (MQ=255)

                                  tgatatGTTAATTGATCTCTAATAAGTTTATATATATTAATTTGTCTAAAATAATTAATAATATTTGGTATTTGTCTTAATAAATCATATGATGAATATTTCTTTACTGAAATTCTATGTATTGataa                                                                                          <  2:951468/126‑1 (MQ=255)

                                      aaGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGataaataa                                                                                      <  2:352187/128‑1 (MQ=255)

                                      aaGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGataaataa                                                                                      <  2:2041411/128‑1 (MQ=255)

                                       aGTTAATTGATCACTAATAAGTTTATATTTATTAATATGTCTAAAATAAATAATAATATGTTTTCATTGTCTTAATAAATCAAATGATGAATATTAAATTTCTGAAATGATATGTAATGAGAaaaaat                                                                                     >  2:689993/1‑128 (MQ=255)

                                       aGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAaataat                                                                                     <  1:1112276/128‑1 (MQ=255)

                                        gTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAatc                                                                                    >  1:904594/1‑128 (MQ=255)

                                        gTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAatc                                                                                    >  1:991650/1‑128 (MQ=255)

                                          tAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAatcat                                                                                  <  2:573097/128‑1 (MQ=255)

                                           aaTTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAatcatc                                                                                 >  2:2178518/1‑128 (MQ=255)

                                              tGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGa                                                                              <  2:1739386/128‑1 (MQ=255)

                                                ataaCTAAGAATTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGAAAAATAATCATCAGaaa                                                                            <  1:163753/125‑1 (MQ=255)

                                                aTCACTAAGAAGTTTATATTTATTAATTTGTCTATAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGaaa                                                                            <  1:2369100/128‑1 (MQ=255)

                                                aTCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTa                                                                                                 <  1:1191077/107‑1 (MQ=255)

                                                aTCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGaaa                                                                            <  1:362367/128‑1 (MQ=255)

                                                  cACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAata                                                                          <  2:197484/128‑1 (MQ=255)

                                                   aCTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAatat                                                                         >  1:2161260/1‑128 (MQ=255)

                                                      aagaagTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGc                                                                      <  1:207462/128‑1 (MQ=255)

                                                      aagaagTATATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATATTCATCAGAAATATAGc                                                                      >  2:1319059/1‑128 (MQ=255)

                                                       agaagTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCa                                                                     >  1:1937469/1‑128 (MQ=255)

                                                              tataTTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCt                                                              >  1:1982219/1‑128 (MQ=255)

                                                               atatTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCaa                                                                    <  2:116919/121‑1 (MQ=255)

                                                               atatTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTg                                                             <  2:2315763/128‑1 (MQ=255)

                                                                 atttattAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCTAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGaa                                                           >  1:758793/1‑128 (MQ=255)

                                                                  tttattAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAAt                                                          <  2:1364739/128‑1 (MQ=255)

                                                                   ttattaATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATa                                                         >  2:405949/1‑128 (MQ=255)

                                                                    tattaATTTGTCTAAAATAATTAATAATATGTTGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATATCAAGTATCTGAATaa                                                        <  2:730905/128‑1 (MQ=255)

                                                                    tattaATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATaa                                                        <  1:1042280/128‑1 (MQ=255)

                                                                     attaATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAg                                                       >  1:795852/1‑128 (MQ=255)

                                                                     attaATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAg                                                       <  1:1596859/128‑1 (MQ=255)

                                                                     attaATTTGTCGAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAAGGATTAATAATCATCAGTAATATAGCAAGTATCTGaagaag                                                       >  2:1796088/1‑128 (MQ=255)

                                                                       taATTTGTCTAAAATAATTTATAATATGTGGTCATTGACTTAATAAATCAAATGATGAATATTTCATTACTTAAATTCTATGTAATTATAAATAATCATCAGAAATATAGAAAGTATCTGATTatcat                                                     >  1:1234686/1‑124 (MQ=255)

                                                                       taATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATCATGAAAATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGaa                                                     >  2:807558/1‑127 (MQ=255)

                                                                         aTTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATATCAAGTATCTGAATAAGATaa                                                   >  1:948575/1‑128 (MQ=255)

                                                                           ttGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATaaaa                                                 >  2:2260867/1‑128 (MQ=255)

                                                                             gTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAAt                                               >  2:104447/1‑128 (MQ=255)

                                                                               cTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAAttt                                             <  2:1206469/128‑1 (MQ=255)

                                                                               cTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAAttt                                             <  1:1085013/128‑1 (MQ=255)

                                                                               cTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAAttt                                             >  2:316737/1‑128 (MQ=255)

                                                                                tAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATAATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTta                                            >  1:2293557/1‑128 (MQ=255)

                                                                                 aaaaTAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTtat                                           >  2:1268214/1‑128 (MQ=255)

                                                                                  aaaTAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTtata                                          <  1:49922/128‑1 (MQ=255)

                                                                                    ataatTAATAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAg                                        >  1:1151604/1‑128 (MQ=255)

                                                                                     taataaatAATATGTGGTCATTGTCTAAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGt                                       <  2:1239014/128‑1 (MQ=255)

                                                                                      aaataataaTATGTGGTCATTGTCTTAATAAATCAAAAGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGta                                      <  2:845613/125‑1 (MQ=255)

                                                                                       attaatAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGtaa                                     >  1:853714/1‑128 (MQ=255)

                                                                                       attaatAATATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGtaa                                     >  2:1516658/1‑128 (MQ=255)

                                                                                         taataaTATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGtaaat                                   <  1:1880823/128‑1 (MQ=255)

                                                                                         taataaTATGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGtaaat                                   >  2:1579853/1‑128 (MQ=255)

                                                                                           ataattTGTGGGCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGtaaataa                                 <  2:1635864/128‑1 (MQ=255)

                                                                                            taataTGTTGTAATTTTATTTATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGtaaataaa                                <  1:2035921/128‑1 (MQ=255)

                                                                                             aattTGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTaaataaat                               <  2:508952/128‑1 (MQ=255)

                                                                                              atatGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAATATAAAAATTTATAAGTAAATAAATg                              >  2:1411411/1‑128 (MQ=255)

                                                                                              atatGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATg                              >  1:714362/1‑128 (MQ=255)

                                                                                              atatGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATg                              <  1:1745854/128‑1 (MQ=255)

                                                                                                atGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGAt                            <  1:41451/128‑1 (MQ=255)

                                                                                                atGTGGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGAt                            >  2:187683/1‑128 (MQ=255)

                                                                                                 tgtgGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATc                           <  2:2110451/128‑1 (MQ=255)

                                                                                                 tgtgGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATc                           <  2:462253/128‑1 (MQ=255)

                                                                                                  gtgGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCa                          >  2:1129224/1‑128 (MQ=255)

                                                                                                  gtgGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCa                          <  1:155579/128‑1 (MQ=255)

                                                                                                   tgGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGATATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCaa                         <  2:257535/128‑1 (MQ=255)

                                                                                                   tgGTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCaa                         <  1:662298/128‑1 (MQ=255)

                                                                                                   tcgTCATTGTCTTTATAAATCTAATGATGATTATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGTATAAGATAATAATTTATAAGTAAATAAATGATGaa                         <  1:330186/126‑1 (MQ=255)

                                                                                                     gTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAAt                       <  1:1404804/128‑1 (MQ=255)

                                                                                                     gTCATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAAt                       <  2:894209/128‑1 (MQ=255)

                                                                                                       cATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCt                     <  1:1508988/128‑1 (MQ=255)

                                                                                                       cATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCt                     <  1:2421665/128‑1 (MQ=255)

                                                                                                       cATTGTCTTAATAAATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCt                     <  1:1824430/128‑1 (MQ=255)

                                                                                                                 ataaATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTttctt           >  2:1461086/1‑128 (MQ=255)

                                                                                                                 ataaATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTttctt           >  1:2324480/1‑128 (MQ=255)

                                                                                                                  taaATCAAATGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAATAATTTATAAGTAAATAAATGATCAAATATAACTTttattc          >  2:1534993/1‑128 (MQ=255)

                                                                                                                        aaaTGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTTTCTTCTAAATg    <  2:2079785/128‑1 (MQ=255)

                                                                                                                         aaTGATGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTTTCTTCTAAATGt   <  2:2413656/128‑1 (MQ=255)

                                                                                                                          atgatgAATATTTCATTACTGAAATTCTATTTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATTATCAAATCTAACTTTAATTATAAATAtt  >  2:1932183/1‑128 (MQ=255)

                                                                                                                          atgatgAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTTTCTTCTAAATGtt  >  2:42871/1‑128 (MQ=255)

ATCTAAAAACTTATAACAAGTTTGATAATAATGAGCATAAGTTAATTGATCACTAAGAAGTTTATATTTATTAATTTGTCTAAAATAATTAATAATATGTGGTCATTGTCTTAATAAATCAAATGCTGAATATTTCATTACTGAAATTCTATGTAATGATAAATAATCATCAGAAATATAGCAAGTATCTGAATAAGATAAAAATTTATAAGTAAATAAATGATCAAATCTAACTTTTCTTCTAAATGTT  >  CP016816/436932‑437181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`