New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =1835 (0.600)294 (0.120) 129/208 12.6 16.9% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 1378 (0.550)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2124 total aligned reads displayed.

CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAG  >  CP016816/311026‑311281
                                                                                                                                 |                                                                                                                                  
      taataaGAAATACAAATGAAATTAAAATTTTAATTAACTTTTTTATTTTAAAAACAAATTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatat                                                                                                                              <  1:5260538/128‑1 (MQ=255)
       aataaCTAATCCAAAAGAACTTAAACTTGTAATTAACTTTTTCATTATACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatata                                                                                                                             <  1:4161194/128‑1 (MQ=255)
        ataaataaTAAAAATGAAATTAAAATTGTAATTAACTTTTTCATTTTAAACAACCCTTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAACATATATATCATAAATTCAT‑‑tatatatatatat                                                                                                                            <  2:2791051/128‑1 (MQ=255)
        ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatat                                                                                                                            >  1:138790/1‑128 (MQ=255)
        ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatat                                                                                                                            >  2:1252676/1‑128 (MQ=255)
         taaATAATCAAAATGAACTTAAAATTTTAATTAACTTTTTAATTTTACACACAAATTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAAAATACATTAAT‑‑tatatatatatata                                                                                                                           <  2:4859729/128‑1 (MQ=255)
           aataataaaaattaaattaaattTTTAAATAACTTTTTCATTTTACACACCCCTTTATATAAAATAAAATACTTGTTAAATAAGATTCAAAACATATATAACATAAATTCAT‑‑tatatatatatatata                                                                                                                         <  2:2583346/120‑1 (MQ=255)
             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCTT‑‑tatatatatatatatata                                                                                                                       <  2:3587121/128‑1 (MQ=255)
             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                                       >  1:1886308/1‑128 (MQ=255)
              aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatat                                                                                                                      >  1:2863765/1‑128 (MQ=255)
               aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatata                                                                                                                     >  1:3026990/1‑128 (MQ=255)
                tacAAATTAAATAAAAAATGTAATTAACTATTTCATTATACACACACCTTATTAAAAAATAAAAAACATTTTACATACGATTCAAAACAAATATAACAAACATTCAT‑‑tatatatatatatatatatat                                                                                                                    <  1:45170/126‑1 (MQ=255)
                tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                                    >  1:1769730/1‑128 (MQ=255)
                tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                                    >  2:770479/1‑128 (MQ=255)
                  aaaattatattAAAATTTTAATTAAATTTTTCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatat                                                                                                                  <  2:594301/119‑1 (MQ=255)
                   aaaTGATCTTAAAATTTTATTTAATTTTTTCATTTTAAAAAACCATTATTAAAAAATAAAATACTTTTTATATAAGATTAAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatata                                                                                                                 <  2:1866728/128‑1 (MQ=255)
                    aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatatat                                                                                                                >  2:5409544/1‑128 (MQ=255)
                    aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataa                                                                                                                >  2:550139/1‑127 (MQ=255)
                      tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatataatgca                                                                                                              <  1:4254214/128‑6 (MQ=255)
                        aaattAAAATTTTAATTAAATTTTTCATTTTACACACACATTATTAAAAAATAAAATAATTGTTAAATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatgca                                                                                                            <  1:1634426/125‑6 (MQ=255)
                         tattAAAATTGTAATTAAATTTTTCATTTTAAACACCCATTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAAAATACATTCAT‑‑tatatatatatatatatatataatgcaata                                                                                                           <  2:3259173/126‑9 (MQ=255)
                          cTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCa                                                                                                        >  1:5393114/1‑128 (MQ=255)
                          cTTAAAATAGTAATTAACTTTTTCATTTTACACACCCCATATTAAAAAATAAAATAATTTTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCa                                                                                                        <  1:1524846/128‑1 (MQ=39)
                            tAAAATTTTAATTAACTTTTTCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAatat                                                                                                    <  2:2212836/128‑1 (MQ=255)
                             aaaaTTTTAATTTAATTTTTATTTATAAACTCAGCTTATTAAAAAATAAAATAATTTTTAAATATTATTAAATAAATATATATAATAAATTCTT‑‑tatatatatatatatatatatatat‑‑ataatgcaa                                                                                                     <  2:4774883/128‑9 (MQ=255)
                                   gTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATg                                                                                             <  2:661434/128‑1 (MQ=255)
                                        tAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATTTATATATATATATA‑‑AATCAATTTGTAAATGAatat                                                                                        >  2:3504784/1‑128 (MQ=255)
                                           cTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCTATATGTAATAGAAAatatt                                                                                     >  1:3352531/1‑127 (MQ=255)
                                           cTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGATATATGTAAATGAAAatatt                                                                                     >  2:4668247/1‑127 (MQ=255)
                                            tttttCTTTTTATACAAACATTATTAAAAAATATAATATTTTTTAAATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATgg                                                                                    <  2:5831164/128‑1 (MQ=255)
                                             ttttCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGt                                                                                   <  2:5298625/128‑1 (MQ=255)
                                              tttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGAGTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAT‑‑AATTAAATATTTAAATTAatatat                                                                                      >  2:4283131/1‑128 (MQ=255)
                                                 aaTTTTACACACATCATATTAAAAAAAAAAATATTTGTTAAATAATATTAAAAAAATATATAAAATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGtat                                                                                 <  2:1393274/127‑1 (MQ=37)
                                                 aaTTTTAAACACAACTTATTAAAAAATAAAATATTTGTTAAATAATATTAAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTataa                                                                               <  1:3243406/127‑1 (MQ=255)
                                                  aTTTTACACACACCTTATTAAAAAATATTATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAg                                                                            <  1:438696/128‑1 (MQ=255)
                                                  aTTTTAAACACACATTATTAAAAAATAAAATAATTGTTACATAATATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTataat                                                                              <  1:2714511/128‑1 (MQ=255)
                                                   ttttAAACAAACATTATTAAAAAATAAAATAATTTTTACATAAGATTAAAAAAATATATAACATAAATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTataa                                                                               <  2:2305378/128‑1 (MQ=37)
                                                    tttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCa                                                                          >  1:5889940/1‑128 (MQ=255)
                                                     ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AAAAAAATATATAAAATAAAATTTGTTataata                                                                             >  1:6399280/1‑128 (MQ=255)
                                                     ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATTTAAATGAAAATATAGTATAATATCaa                                                                         >  2:1013956/1‑128 (MQ=255)
                                                         acacacCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAAAATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                                     <  1:4033223/128‑1 (MQ=255)
                                                          cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                  >  1:714022/1‑128 (MQ=255)
                                                           acaccatattaAAAAATAAAATAATTGTTATATAATATTAAAAACATATATAACATATATTAT‑‑TTATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                                     <  1:5082323/122‑1 (MQ=255)
                                                              cattattaATAAATAAAATACTTGTTAAATAAGATTAAAAACATATATAACATAAATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                  <  1:6270201/126‑1 (MQ=255)
                                                              acTTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAACATATATAACATAAATTAAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                  <  2:4974729/127‑1 (MQ=255)
                                                                ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGAAATATGTAAATGAAAATATGGTATAATATCAACCGTTtata                                                                >  1:2180293/1‑128 (MQ=255)
                                                                 tttttataaatattataCTTGTTTAATAAGATTCAAAACATATATAATATAAATTAAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                 <  1:5503484/121‑1 (MQ=37)
                                                                  attaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATTTTATAATAGAAACAGTTtata                                                                >  1:4634443/1‑128 (MQ=255)
                                                                     aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TTTATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAATGTa                                                           >  2:5198579/1‑128 (MQ=255)
                                                                       aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAAAATTCAATATTTAAATGAAAATATGTTATAATAGCAACAGTTTATAAAg                                                             >  2:4499568/1‑128 (MQ=255)
                                                                         aataatataCTTGTTATATACTATTAAAAAAATATATAAAATAAATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                       <  2:6504594/128‑1 (MQ=255)
                                                                         aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATTCAATATTTATATTAAAATATGGTATAATAGAAACCGTTTATAAAGTaaa                                                         >  2:149062/1‑128 (MQ=39)
                                                                            aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATTCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAg                                                  >  2:5092783/1‑128 (MQ=255)
                                                                               ataCTTGTTATATACGATTCAAAACATATATAACATACAT‑‑‑T‑‑TATTATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                               <  2:397718/128‑1 (MQ=255)
                                                                                taCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAATATATGGTATAATAGCAACCTTTTATAAAGTataaaaaattat                                                >  2:2680628/1‑123 (MQ=255)
                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑A‑‑‑‑AATATATATATGAAAATATATTATAAAAGAAAAAAATTATAAAATAAAAAAATATAAAata                                            >  1:6616721/1‑128 (MQ=255)
                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATTTTAATGAAAATTTGTTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTaaa                                              >  2:1738911/1‑128 (MQ=255)
                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATTTAAATGAAAATATGGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTaaa                                              >  1:1032610/1‑128 (MQ=255)
                                                                                  attGTTAGATACTATTCAAAACATATATAACATTAATTAAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                              <  2:1147715/127‑1 (MQ=255)
                                                                                   ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATCCAATATGTAAATGAAAATATGGTATAATATAAACCTTTTATAAATTAAAAAAATAATAAat                                             >  1:6040797/1‑128 (MQ=255)
                                                                                    ttttATATAAGATTAAAAAAATATATAACATACATTAAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                              <  1:2441475/126‑1 (MQ=39)
                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATAAAA‑‑AA‑‑AAATATATAAATAAAAATATTTAATAATATAAAAAGTATATAAAATAAAAAAATAGTaaaaa                                            >  1:3686897/1‑126 (MQ=255)
                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                          >  2:6051001/1‑128 (MQ=255)
                                                                                     gTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                           <  1:2036990/128‑1 (MQ=255)
                                                                                       tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATTCAATATGTAAAATAAAATATGATATAATAGCAACAGATTATATATTAAAAAAATAGTAAatatta                                         >  1:2638225/1‑126 (MQ=255)
                                                                                       tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATTCAATATATAAATGAAAATATGGTATAATAGCAACATTTTATAAAGTAAAAAAATATTAAAAAtacta                                       >  2:6275666/1‑128 (MQ=255)
                                                                                          ataataTTTAAAAAATATATAACATATATTAATTATATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                          <  2:5726118/123‑1 (MQ=255)
                                                                                           tACGATTCAAAACATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                     <  1:5630585/128‑1 (MQ=255)
                                                                                             cGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTATATAAAGTAAAAAAATAGTAAATAtactaat                                     >  1:3588043/1‑126 (MQ=255)
                                                                                             cGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAataagtagta                                     <  1:3872121/128‑8 (MQ=255)
                                                                                                ttaaaaaaaTATATAAAATATATTAAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                                <  2:3364503/125‑1 (MQ=255)
                                                                                                ttaaaaaCATATATAACAAAAATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                                <  2:4388151/125‑1 (MQ=255)
                                                                                                ttCAAAACATATATAACATACATTAAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAataagtagtatat                                  <  2:1626404/128‑11 (MQ=39)
                                                                                                    aaaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGAAATATGTAAATGAAAATATGTTATAATAGCAACCTTTTATAAAGAAAAAAAATAATAAATATACTAAATATATACta                            >  1:836482/1‑128 (MQ=255)
                                                                                                       cATATATAACATACATTCA‑‑ATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                         <  1:499340/128‑1 (MQ=255)
                                                                                                         tatataACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATTTAATACTTATTTACTAATaaaaa                     >  1:1254842/1‑127 (MQ=255)
                                                                                                          atataACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                        >  2:2433377/1‑128 (MQ=255)
                                                                                                          atataACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                        >  1:4895093/1‑128 (MQ=255)
                                                                                                           tataTCATATATTTAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                       <  2:2070766/128‑1 (MQ=255)
                                                                                                            ataACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAAta                    >  1:2555509/1‑127 (MQ=255)
                                                                                                            ataACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATCTAAAAGAAAATATGATATAATAGACACCGATTATAACTAAAAAAAATATTATATAAACAACTATTTTAAAAAAAAAAta                    >  2:4195681/1‑127 (MQ=255)
                                                                                                             taACATACATTCAT‑‑‑‑TATATATATATATATATATATAT‑‑AATGCAATATGTAAAAGAAAATATGGAATAATAGCAACCGTATATAAAGTAAAAAAATAGTAAATATACTACTTATATAAAAAATAAATCt                   >  2:1931522/1‑128 (MQ=255)
                                                                                                             taACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                 <  2:4082860/128‑1 (MQ=255)
                                                                                                                 atacatTCATTATATATATATATATATATATATATAT‑‑AAAGCAATATGTAAAAGAAAATATGGTATAATATCAACCTTTTATAAATTAAAAAAATAGTAAATATAATACTTATATAATAATAAAAtat                   >  2:6393421/1‑126 (MQ=255)
                                                                                                                 ataaatTAAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                 <  2:2919334/128‑1 (MQ=255)
                                                                                                                    tgcattatatatatatatatatatatatatatat‑‑aATGAAATATGTATATTAAAATATGTTATAATATAAACAGTATATAAAATAAAAATAAAGTAAAAATACTACTTATATACTAATAAAATCTAtt                >  2:3037535/10‑128 (MQ=25)
                                                                                                                      cattatatatatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTATCTAATAAAATCTAtttt              >  1:4778309/8‑128 (MQ=255)
                                                                                                                       aaattcattatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt             <  1:1149640/120‑1 (MQ=255)
                                                                                                                        cattcattatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGAAAAAAAATAGTAAATATACTAATATTTTACTAATAAAATCTATTttta            >  2:3882427/8‑128 (MQ=39)
                                                                                                                          ttcattatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTATTtttatt          <  1:3463653/123‑1 (MQ=255)
                                                                                                                           tatatatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattt         <  1:6481185/126‑1 (MQ=255)
                                                                                                                            ttcattatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattta        <  2:3719287/123‑1 (MQ=255)
                                                                                                                            cattatatatatatatatatatatat‑‑aTTGAAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAAGTAAAAAAATATTATATATACTAATTATTAAATAATAATATATATTtttattta        >  2:3157449/4‑128 (MQ=255)
                                                                                                                            cattatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattta        <  2:89040/125‑1 (MQ=255)
                                                                                                                              cattatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa      <  1:2284998/125‑1 (MQ=255)
                                                                                                                               tatatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGAAAATATACTAGTTATTTACTAATAAAATCTATTTTTATATaaaa     >  2:6174150/1‑128 (MQ=255)
                                                                                                                                atatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaa    <  1:6135071/128‑1 (MQ=255)
                                                                                                                                atatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaa    >  1:3121218/1‑128 (MQ=255)
                                                                                                                                 tatatatatatatatatatat‑‑aATGCAATATTTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACATATATACTAATAAAATATATTTTTATATaaaaaa   >  2:5618835/1‑128 (MQ=255)
                                                                                                                                 tatatatatatatatatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaaa   <  1:576622/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                  
CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAG  >  CP016816/311026‑311281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.