New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =2749 (0.900)348 (0.130) 136/226 13.3 12.8% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 2257 (0.820)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2885 total aligned reads displayed.

AAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76765‑77019
                                                                                                                                |                                                                                                                                 
aaaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTATTTAAAGAAAAATATTACAAc                                                                                                                                   >  1:4179736/1‑128 (MQ=255)
    ttATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTAAAATAAAATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑ttta                                                                                                                             >  2:6294060/1‑127 (MQ=255)
       tatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑ttttttt                                                                                                                          >  2:1167085/1‑128 (MQ=255)
         tatatTTTTGAAATTAATGATTTATAATAAAAATAAATAAAAAATTTAAAAACCAAATTACCCATTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAA‑‑ttttttttt                                                                                                                        <  1:6428665/128‑1 (MQ=255)
         tatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑ttttttttt                                                                                                                        >  1:2170607/1‑128 (MQ=255)
           tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑tttttttattt                                                                                                                      >  2:4483525/1‑128 (MQ=255)
           tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑ttatattttat                                                                                                                      >  1:3497622/1‑126 (MQ=255)
            atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑tttttttttttt                                                                                                                     >  1:888731/1‑128 (MQ=255)
                  gAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAAAACAAATTACACTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAA‑‑tttttttttttttttttt                                                                                                               >  1:2041757/1‑126 (MQ=255)
                   aaCTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑tttttttttttttttggac                                                                                                              >  2:3707134/1‑124 (MQ=255)
                    aCTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑tttttttttttttttggaaa                                                                                                             >  2:4237805/1‑123 (MQ=255)
                        aaGTATTTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAACAAAAAAATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAAc                                                                                                        <  2:6388690/128‑1 (MQ=255)
                        aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAc                                                                                                        >  1:5338323/1‑128 (MQ=255)
                         aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTATTTTTTTTTTTGTAAATAAc                                                                                                        >  2:2688794/1‑128 (MQ=255)
                                ataataAAAATTAATAATAACTGTACAAACCAAATTCACCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAtt                                                                                                <  2:834371/128‑1 (MQ=255)
                                    taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGTAAATAACAAAATTTTAcc                                                                                           >  2:5294845/1‑128 (MQ=255)
                                    taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTATTTTTTTTTTTTT‑‑AACTAACATAATATTTTAcc                                                                                           >  2:4743480/1‑128 (MQ=255)
                                      cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTTTAAATAACATAAAATTTTAcc                                                                                           >  2:6507684/1‑128 (MQ=255)
                                        aaTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTATAACAAACAAATAATTTTACAAat                                                                                        >  2:3558853/1‑128 (MQ=255)
                                         aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAC‑‑TATTTTTTTTTTTTTTTAAATAACATATAAtttaaaaaatt                                                                                       >  1:4837129/1‑120 (MQ=255)
                                          ttAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTTGAAAAAAAATATAATTTTAAAAatt                                                                                       >  1:1319766/1‑128 (MQ=255)
                                          ttAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGTAAATAAAATATAATTTTAAAAattat                                                                                     >  2:4911035/1‑128 (MQ=255)
                                             ataataaCTGTAGATCCCAAAATACCCTTTAAATTCTAATAATAATATATAAATATTAATTTTTTAAATAAAAATATAACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAattatt                                                                                    <  1:2988390/128‑1 (MQ=255)
                                               aaaaaatGTAAAAACCAAATTTCCCTTTAAATTTAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                 <  2:616658/122‑1 (MQ=255)
                                                 taaCTTTACAAACCAAATTCCCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatt                                                                              <  1:3611796/128‑1 (MQ=255)
                                                 taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTAAAAAAACATATAATATTAAAAATTAATATaat                                                                               >  2:3839988/1‑128 (MQ=255)
                                                  aaatGTACAACCCAAATTCCACTTTAAATTAAAATAACATTATATAAATAAAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatt                                                                              <  2:1767353/125‑1 (MQ=255)
                                                  aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTTGAAATAAAATATAATTTTAAAAATTATTAGat                                                                                >  2:4131235/1‑127 (MQ=255)
                                                  aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGTAAATAAAATATAATTTTAAAAATTATAATaattt                                                                             >  1:309788/1‑128 (MQ=255)
                                                    cTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttca                                                                           >  1:242282/1‑128 (MQ=255)
                                                     tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAAAAAAATAAATTTTTCCAATTATTAAaatttaca                                                                          >  1:5460818/1‑125 (MQ=255)
                                                        aCAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTAAAAAAAAATATAATTTTAAAAATTATAtaaatttaaatt                                                                        >  1:1414202/1‑128 (MQ=255)
                                                         cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTAACAAATTTTATaatttcatct                                                                        >  2:3480129/1‑125 (MQ=255)
                                                             ccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAattaaaatttcaaa                                                                   >  2:3956483/1‑126 (MQ=255)
                                                             ccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑‑‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                <  2:2396561/128‑1 (MQ=255)
                                                               aaaTTCCCCTTTAAATTAAAATAAAATTATATAAATTTAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                 <  1:6353325/128‑1 (MQ=255)
                                                               aaaTTAACCTTTTAAATATAAAAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                 <  2:3193296/128‑1 (MQ=255)
                                                               aaaTACCCATTTAAATTCAAATAACATTAAATAAATATAAATTTTTTAAATAAAAATATTAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                 <  2:1665382/128‑1 (MQ=255)
                                                                 aTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAA‑‑TTTTTTTTTTTTTTTTTTAACAAAAATAAAATTTTAACAATTAATATaatttaaatttaaaaaat                                                                >  2:1025550/1‑121 (MQ=255)
                                                                  ttcaacTTTTAATTAAAATAAAATATTTTTAATATAAATTTTTTAAATAAAAATATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                               <  1:3228183/123‑1 (MQ=255)
                                                                  atCCCCTTTAAATAAAAAAAACATTATAAAAATATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                               <  2:5515675/127‑1 (MQ=255)
                                                                   tCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAAAATATAATTTTACAAATAATTAAAATTTAAATTTAACACTTGAAt                                                            >  1:2498326/1‑128 (MQ=255)
                                                                    acaatttAAATTAAAATAAAATTAAATAAATATAAATTTTTTAAATAAAAATATTAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                            <  1:4077698/124‑1 (MQ=255)
                                                                     ttttttaaatttaaaTAAAATTTTTTAAATATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                            <  1:4611171/125‑1 (MQ=255)
                                                                     cccTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGTAACTAAAATATAATTTTACAAATTATTAAaatttcaatttaaaaaattaat                                                            >  2:2806375/1‑117 (MQ=255)
                                                                     cacTTTAAATTAAAAAAAAATTAAATAAATATAAATTTTTTAAATAAAAAAATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                           <  1:1704152/126‑1 (MQ=255)
                                                                     accTTTAAAATCAAAATAAATTATATAAATATAAATTATTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                           <  1:3404566/127‑1 (MQ=255)
                                                                      ccTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACAAATTATTAAAATTTCAATTTCACAGATGAAttt                                                          >  1:6242917/1‑127 (MQ=255)
                                                                        ttttAATTAAAATAACATTATATAAATTAAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAt                                                        <  2:2545573/128‑1 (MQ=255)
                                                                         tttaattttaaTATCATTATATAATCTTAAATTTTTTTAATAATAATATTTAAA‑‑TTTTTTTTTTTTTTTTGTAAGTTACATATTATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                       <  1:5207084/119‑1 (MQ=255)
                                                                          tAAATTCAAATATAATTATATAAATTTTAAATTTTTTAATAAAAAAATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                      <  2:1987723/128‑1 (MQ=255)
                                                                          tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTT‑‑GAAATAACATATAATTTTACAAATTATTAAAATTTCAATTTAACAAATAAATTTAttac                                                     >  1:4359267/1‑126 (MQ=255)
                                                                          tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAATAAAATAAAATATTACAAATTATTAAAAATTCAATTTCACAAATGAAtaaatta                                                      >  1:2848772/1‑122 (MQ=255)
                                                                          tAAATTAAAATAAAAATATAAAAATTTTAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                       <  2:1869767/128‑1 (MQ=255)
                                                                          tAAATTAAAAAAAAATTATTTAAATATAAATTTTTTAAATAAAAAAATTAAAA‑‑ATTTTTTTTTTTTTCGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:4380873/128‑1 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATATTTTTAACAATTAATTCAATTTAAATTAAAAATATTAATTGAttt                                                      >  2:5149229/1‑128 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAATAAAATATAATTTTACCAATTATTATAATTTAAATTTCAAATATTAATTTATttc                                                     >  1:5792691/1‑128 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  1:5875802/128‑1 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAAAAAAATATAATTTTAACAATTATTTGAATTTAAATTTAACAGATGAatttatttg                                                     >  2:1295290/1‑127 (MQ=255)
                                                                           aaaTTAAAAAAACATTATTTAAATATAAATTTTTTAAATAAAAATATTAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:3326091/128‑1 (MQ=255)
                                                                            aaTTTAAATAAAATTATATTAAATTAAAATTTTTTAATTAAAAAATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:4623466/128‑1 (MQ=255)
                                                                              ttataaaaaaaTTATATAAATATAAATTTTTTAAATAAAAATAATAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                  <  1:764403/118‑1 (MQ=255)
                                                                              ttCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTTATttctt                                                   >  2:5630342/1‑128 (MQ=255)
                                                                              ttCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACAAACAAAAAAATATACCAAATATTAAAATTTAAATTTAACAAATTAATAGATtactt                                                   >  1:4470190/1‑128 (MQ=255)
                                                                                 aaaTAAAATTTTATAAATATAAATTTTTTAAATAAAAATATTTAAA‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                              <  2:6057536/128‑1 (MQ=255)
                                                                                  aataatATTATATAAATATAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                              <  1:1232085/128‑1 (MQ=255)
                                                                                       cATTTTATAAAATATAATTTTTTAAATAAAAAAATTAAAA‑‑TATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAAttt                                         <  1:668933/128‑1 (MQ=255)
                                                                                       cATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACTTATAATTTTACCAATTTTTAGATTTAAAATTTAACATATTAATTCATTTATTCTACTTAttt                                         >  2:2908910/1‑128 (MQ=255)
                                                                                           taaataaattttaaTTTTTTAAATAAAAATATTTAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTc                                      <  2:1414202/116‑1 (MQ=255)
                                                                                           atataaatataaATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                     <  1:5562261/128‑1 (MQ=255)
                                                                                           atataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGAAAAAACAAAAAATTTTAAAAATTATTATAATTTAAATTTAAAAAAATAATTGATTTCTTATAAAAAtttttat                                     >  1:3840651/1‑124 (MQ=255)
                                                                                           atataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                   >  1:1537086/1‑128 (MQ=255)
                                                                                            tataaatataaaTTTTTTAAAAAAAAATATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTGTTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                     <  2:5753120/128‑1 (MQ=255)
                                                                                            tataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATAATTAGAATTTCAATTTAACATATTAATTGATTTCTAATAATAAttttagaa                                    >  2:2269610/1‑123 (MQ=255)
                                                                                            tataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATAAGAATTTAAATTTCACATATTAATTTATTTATTATAAAAAtttttata                                    >  1:4970052/1‑123 (MQ=255)
                                                                                             ataAATTTAAATTTTTTAAATTAAAATATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                    <  1:3311362/128‑1 (MQ=255)
                                                                                             ataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATATAATTTTACCAATTTTTTTAATTTAAATTTCAAATATTAATTTATTTATTATAATAATTTTTatat                                   >  1:1116402/1‑128 (MQ=255)
                                                                                               aaaGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAAAATAATTTTACCAATTATTATAATTTAAATTTCACATATAAATTTATTTATTATAAAAAATTTTatatat                                 >  1:1910706/1‑128 (MQ=255)
                                                                                                   aTAATTTTTTTAAATAAAAATATTACAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGAt                             <  2:3044181/128‑1 (MQ=255)
                                                                                                   aTAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTAAAAAAAAATATAATTTTACAAAATATTAAAATTAAAATACCAAAAATTAATTGATTTATACTAATAttttattttataattt                             >  2:2140581/1‑116 (MQ=255)
                                                                                                    tAAATTTTTTAAAGAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                            <  1:5107100/128‑1 (MQ=255)
                                                                                                     aaaTTTTTTTAATTAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGt                           <  1:3709118/128‑1 (MQ=255)
                                                                                                     aaaTTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTAAATTACACAGATGAATTGATTTATTATAATAATTTGTATATATATATGt                           >  1:5993540/1‑128 (MQ=255)
                                                                                                        aTTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTTGAATTTCAATTTAACAGATGAATTGATTTCTTCTAATAATTTTTCTATATTGATtttt                         >  1:2597099/1‑128 (MQ=255)
                                                                                                         ttttttAAACTAAAAAATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttt                        <  2:5946755/128‑1 (MQ=255)
                                                                                                           ttttAAATTAAAATTTTACAT‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                      <  1:5671552/128‑1 (MQ=255)
                                                                                                              tAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTATAATTTCAATTTCAAAGATAAATTGATTTCTTCTAAAAATTTTTATAATTAGATGTTTTTtata                   >  2:6618971/1‑128 (MQ=255)
                                                                                                              tAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGATTTATTATAATAATTTGTCTATATAGATGTTTTTTatat                  >  1:3924261/1‑128 (MQ=255)
                                                                                                                 ataaaatTATTAAAAA‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCTATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt                <  1:2299191/126‑1 (MQ=255)
                                                                                                                  taaaaaTATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACTTATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt                <  1:6507684/127‑1 (MQ=255)
                                                                                                                  gAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAATATTAGAATTTCAATTTACCAGATGAATTTATTTATTATAATAATTTGTGTATATATATGTTTTTTATATCTaa              >  2:715664/1‑128 (MQ=255)
                                                                                                                    aaaaTATTATAT‑‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCAAAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  1:4698160/128‑1 (MQ=255)
                                                                                                                    aaaaTATTAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  1:1795250/128‑1 (MQ=255)
                                                                                                                     aaaatttAAAAA‑‑TTTTTTTTTTTTTTTAGTATCTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  2:1530290/123‑1 (MQ=255)
                                                                                                                     aaaTATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             >  1:269460/1‑128 (MQ=255)
                                                                                                                     aaaTAATAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAAt            <  1:1000582/128‑1 (MQ=255)
                                                                                                                         atTACAACTTTTTTTTTTTTTTTTTTGGAAAAAACATATAATTTTACAAATTATTAAAATTTAAATTTAAAAGATGAATTTATTTATTATAATAATTTTTATATATATATTTTTTTTTTATAAAAAta           >  2:502181/1‑127 (MQ=255)
                                                                                                                         atTACAAA‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGt        <  2:5827986/128‑1 (MQ=255)
                                                                                                                          ttACTAT‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTAACAATTATTAGAATTTCAATTTCTCAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGt        <  2:5409343/128‑1 (MQ=255)
                                                                                                                           tACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACAAATTATTATAATTTCAATTTAAAAGATGAATTTATTTCTTCTAATAATTTTTATATATATATGTTTTTTATATCTAAATAAGTg       >  1:6122136/1‑128 (MQ=255)
                                                                                                                                |                                                                                                                                 
AAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76765‑77019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.