New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =2283 (0.750)385 (0.140) 104/220 18.1 16.7% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 1853 (0.690)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2455 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTAAAAGAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376
                                                                                                                                   |                                                                                                                                 
  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATATC‑tt                                                                                                                                >  1:1491019/1‑128 (MQ=255)
   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTTAAAAAA‑‑ATATC‑tat                                                                                                                               >  1:4841653/1‑126 (MQ=255)
   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑ttt                                                                                                                               >  1:1826954/1‑128 (MQ=255)
      atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑tttttt                                                                                                                            >  1:5152882/1‑128 (MQ=255)
      atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTATTTGTATA‑TGCAAATATTTAAAAAATTAA‑TTTTAACTTGTAAAAA‑‑ATAGC‑tttttt                                                                                                                            >  1:5044142/1‑128 (MQ=255)
         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑ttttttttt                                                                                                                         >  1:3468905/1‑128 (MQ=255)
         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑atttttttt                                                                                                                         >  1:5434423/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑ttttttttttt                                                                                                                       >  1:1683674/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑ttttttttttt                                                                                                                       >  2:1610827/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGA‑ttttttttttt                                                                                                                       >  2:4415476/1‑128 (MQ=255)
             ttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGA‑ttttttttttttt                                                                                                                     >  1:1000505/1‑128 (MQ=255)
               caatAATTTAACGCACATTTATTAAATACTTATAAAAAAAAAATATTTTATTTTTAGATATTTTTTGTATA‑TTCAAATTTTTAAAAAAATAA‑ATTTAACATTTAAAAA‑‑ATAAC‑ttttttttttttttt                                                                                                                   <  2:4140545/125‑1 (MQ=255)
                tttAATTTTTCGAATTTTTTTTAAATATTAATAAACTAAAAATTTTATATTTTTATATATTTTTTTTATA‑TTAAAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAA‑‑ATAGC‑tttttttttttttttt                                                                                                                  <  1:3210776/127‑1 (MQ=255)
                aTTAATTTATAGTACTTGTATTTATTTTTTATTAAATAAAAATATTTTTTTTTTATATATTTTTTTTATT‑TTTAAATTTTTAAAAAATTAA‑TTTTAAAATTTAAAAA‑‑AATTC‑tttttttttttttttt                                                                                                                  <  1:1388532/128‑1 (MQ=255)
                  tAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑ATTGAACTTGTAAAAA‑‑ATAGC‑ttttattatatttttttt                                                                                                                >  2:3087720/1‑128 (MQ=255)
                    aTTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTtata                                                                                                              >  2:2259769/1‑128 (MQ=255)
                     tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑tttttttttttttttttttta                                                                                                             >  2:5921219/1‑126 (MQ=255)
                        aTCGCACTTGTTTTAAATATTAATAAAAAAAAACTAATATATTTTTATATATTTTTTGTATA‑TTCAAATTTTTAAAAAATTAA‑ATTTAACATGTAAAAA‑‑AAATC‑‑CTTTTTTTTTTTTTTTTTATAATg                                                                                                         <  1:764795/128‑1 (MQ=255)
                         tCGCAATTTTATGATTTTTTTATAAAATAAAAATATTATTTTTTTATATATTTTTTTTATA‑TGCAAATTTTTAAAAAATTAA‑TTTTAACTTTTAAAAA‑‑ATATC‑‑TTTTTTTTTTTTTTTTTTATAATgg                                                                                                        <  2:3815615/128‑1 (MQ=255)
                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGA‑ttttttttttttttttaaatttaaaa                                                                                                        >  1:2440288/1‑118 (MQ=255)
                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑ttttttttttttttttttttttattttaaa                                                                                                    >  2:1982806/1‑117 (MQ=255)
                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAtta                                                                                                   >  2:3645642/1‑128 (MQ=255)
                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAattt                                                                                                  >  1:5592130/1‑126 (MQ=255)
                                tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTtaattaaattataa                                                                                                  >  2:6339911/1‑116 (MQ=255)
                                tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAAtata                                                                                                 >  1:2142669/1‑128 (MQ=255)
                                 ttatttattattAATAAAAAAAAAATATTTTATTTTTATAATTTTTTTTTATA‑TTCAAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAA‑‑AAA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                               <  2:1052232/122‑1 (MQ=255)
                                 gtatttaTTAGTAATAAAATAAAAATTTTATCTTTTTAGATATTTTTTTTATA‑TTCAAATTTTTAAAAAATTAA‑TTTTAACTTGTAAAAA‑‑AAAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                             <  1:443092/122‑1 (MQ=255)
                                  tatttattattAATAAACTTAAAAAATTATATTTTTATATATTTTTTGTTTA‑TTTAAAATTTTAAAAAATTAA‑TTTTAAATTTTAAAAA‑‑ATATC‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                               <  1:5515938/123‑1 (MQ=255)
                                   atttattattAATAAAATAAAAATATTATTTTTTTTTTTATTTTTTTTTTA‑TGCAAATTTTTAAAAAATTAA‑TTTTTAATTTTAAAAA‑‑ATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                             <  2:2995197/124‑1 (MQ=255)
                                     taataaataataaAATAAAACTAAAAAATTTTTATATATATTTTTTAAATTAAAAATTTTAAAAAAAAAAA‑TTT‑AAATTTTAAAAA‑‑AAATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                             <  1:890619/121‑1 (MQ=255)
                                      taTTAGTAATAAAAAAAAAATATTATTTTTTTATTTATTTTTTGTATA‑TTCAAATTTTTAAAAAATTTA‑TTTTAACTTTTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtttt                                                                                           <  1:4958299/127‑1 (MQ=255)
                                       aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATTTAAATATAAAtttt                                                                                           >  1:56998/1‑128 (MQ=255)
                                        ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAATA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTA‑ATTGGATTTATATAtttttt                                                                                         >  2:6591396/1‑126 (MQ=255)
                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTTAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTA‑AATTTAATTATATAtttttttt                                                                                       >  1:3577330/1‑124 (MQ=255)
                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATATAAATATATAtttttgt                                                                                        >  1:6095199/1‑125 (MQ=255)
                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTATAATATAAATTTTAgtt                                                                                       >  1:6381285/1‑126 (MQ=255)
                                           ttttttaactaaaaattTTTTATTTTTTTTTTTTTTTTTTATA‑TTTAAATTTTTAAAAAATTTA‑TTTTAACTTTTTAAAA‑‑ATACC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                       <  2:479759/122‑1 (MQ=255)
                                             aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑‑‑TTTTTTTTTTTTTTTTAAAATTAAAATATAAATTTTAGTTAtttt                                                                                  >  1:5257461/1‑128 (MQ=255)
                                              ttaaaataaaatttTTTTTTTTTTTTTTATTTTTT‑TTTA‑TTAAAATTTTTTAAAAATTAA‑TTTTTATTTTTTAAAA‑‑AT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAtttt                                                                                  <  2:342527/126‑1 (MQ=255)
                                               gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGTAAATATAAATTTTTTTTAtttt                                                                                  >  2:5399620/1‑128 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTTTAAAAA‑‑ATAGA‑TTTTTTTTTTTTTTTTTTTAAAATTAAAATAAAAAtttaattttattt                                                                                  >  2:2484909/1‑118 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTaaaatctta                                                                                  >  1:5759489/1‑120 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAG‑‑‑ATTTTTTTTTTTTTTTTTATAATTAAAATATAAATTTTatttttttttt                                                                                >  2:2356645/1‑118 (MQ=255)
                                                      aaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTT‑TATTGTAAATATTAATTTTTGGTATtttttttgct                                                                           >  2:5581473/1‑124 (MQ=255)
                                                       aaatattatCTTTTTATTTTTTTTTTTTTAA‑TTCAAATTTTTTAAAAAATAA‑TTTTTAATTTTAAAAA‑‑AAATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                          <  2:1858505/125‑1 (MQ=255)
                                                        actaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTTAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTAAAATAAAAATTTTAATTATtttttttaataa                                                                         >  1:4161809/1‑122 (MQ=255)
                                                          tattatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATATTGTAATTATAAATTTTTGTTTTTTTTTTTTCTaatt                                                                       >  2:5235653/1‑126 (MQ=255)
                                                          tattatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTTGTTATTTTTTTTTATaatt                                                                       >  1:3710394/1‑126 (MQ=255)
                                                            ttatCTTTTTAGATATTTTTTTTATA‑TTCAAATTTTTAAAAAATTAA‑TTTTAAATTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                     <  1:5356015/128‑1 (MQ=255)
                                                            ttatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATATATATATAAATTTTATTTATTTTTTTTTATAATTAt                                                                     >  1:25466/1‑128 (MQ=255)
                                                            ttatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTAATATAATTTAAATAAAAATTTTAGTTATTTTTTTTTATAATTAt                                                                     >  1:2036089/1‑128 (MQ=255)
                                                            ttatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATAAAAGAAATTTAAATTTTTATTATttttttttttattttta                                                                    >  1:4309666/1‑117 (MQ=255)
                                                                 tttttAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGTAATTATAATTTTTTTTTTTTTTTTTGTATATGTTTATaaa                                                                >  2:5315410/1‑128 (MQ=255)
                                                                 tttttAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTAGGTATTTTGTTTTCTAATTAtaaaaa                                                                >  2:6475818/1‑123 (MQ=255)
                                                                   tttAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTATTTATTTTTTTTTCTAATTAAATaaaaa                                                              >  1:4695521/1‑128 (MQ=255)
                                                                    ttAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTTTTTTTTTTTATAATTATATaaaaaaa                                                            >  1:6600925/1‑128 (MQ=255)
                                                                      atatatTTTTTTTATA‑TTTAAATTTTTAAAAAATTTA‑TTTTAAATTTTTAAAA‑‑AT‑‑T‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATa                                                          <  1:2906419/126‑1 (MQ=255)
                                                                       tatatTTTTTTTTTA‑TTCTAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAA‑‑ATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAATTAg                                                         <  2:4600998/127‑1 (MQ=255)
                                                                        tttttttttttttA‑TTAAAATTTTTAAAAAATTAA‑TTTTTAATTTTAAAAAATATATT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                            <  2:2633115/125‑1 (MQ=255)
                                                                            tttttGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGTAAATATAATTTTTATTTATTTTTTTTTATAATTATATAAAAAAAtttaaat                                                     >  1:2233770/1‑122 (MQ=255)
                                                                             ttttGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTTAATAAAAAATTTTTATTATTTTTTTTTATAATTATATtaaaaataaaaaatt                                                    >  1:6030684/1‑119 (MQ=255)
                                                                                tGTATA‑TGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTTAAATATAAATTTTATTTATTTTTTTTTATAATTATTTAAAAAAATATaaataaaa                                                 >  2:712394/1‑123 (MQ=255)
                                                                                  tttttttaaaaTTTTTAAAAAAATAT‑TTTTTACTTGTTAAAA‑‑TATGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                 <  2:6110791/120‑1 (MQ=255)
                                                                                    ttttttaaaTTTTTTAAAAATTAATTTTTAAATTTTAAAAA‑‑A‑A‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaaaaa                                              <  1:2345508/122‑1 (MQ=255)
                                                                                    ta‑tGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGCTTTTTTTTTTTTTTTTTTTTAAATTTAAAATAAAAATTTTTTTTTTTTTTTTGTATAATTATaaaaaaaaaaaaaaaaaaaaaa                                               >  2:5480012/1‑128 (MQ=255)
                                                                                     tttttaaaTTTTTAAAAAATTTA‑TTTTTAATTTTTAAAA‑‑ATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAat                                             <  2:213841/123‑1 (MQ=255)
                                                                                     tttgaaatttttAAAAAATTTAT‑TTTTAATTTTTAAAAA‑‑TTTG‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAata                                            <  1:6180372/120‑1 (MQ=255)
                                                                                       tGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTATATTTATTTTTTTTTATAATTTTATAAAAAAATATAATTTAAAAAata                                            >  1:1928765/1‑128 (MQ=255)
                                                                                        gCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTATGTTTTTTTGTTTTCTAATTATATAAAAAAATTTAAAGTAAAAAataat                                          >  1:1578641/1‑126 (MQ=255)
                                                                                         taaaTTTTTAAAAAATAAA‑TTTTAACTTTTAAAAA‑‑AT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTg                                         <  2:6008242/127‑1 (MQ=255)
                                                                                         cAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTAGGTATTTTGTTGTCTAATTATATTAAAAAATATAAAGGAAAAattatttt                                        >  1:265436/1‑126 (MQ=255)
                                                                                          aaaTTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATATC‑‑TTTTTTTTTTTTTTTTTAAAAATTTAAAAAAAAATTTTATTTATTTTTTTTTATAATTTTAAAAAAAAATA‑AAATCAAAAAataattta                                       >  2:1484083/1‑123 (MQ=255)
                                                                                          aaaTTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAATTTTTATGTTTTTTTTTTTAAATTTAAATAAAAAAATAAAAATTAAAAattatttt                                        >  2:5126792/1‑126 (MQ=255)
                                                                                          aaaTTTTTAAAAAATTAA‑TTCGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTTAAATTTAAATTTTTTTTATTTTTTTTTGTAATTATATAAAAAAATAAAAAGTaaaaatattttt                                        >  2:3508212/1‑121 (MQ=255)
                                                                                           aaTTTTTAAAAAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTAAATAATTAAAAAAAAAATTTTATGTATTTTTTTAAATAAGTATAAAAAAAAATAAAAATTAAAAAAtttttt                                        >  1:3923426/1‑126 (MQ=255)
                                                                                             ttttAAAA‑AATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTGGTATTTTGTTTTATAAGTATGTAAAAAAATATAAATTAAAAAATTTTTTTata                                    >  1:1135954/1‑126 (MQ=255)
                                                                                                tAAAAAAATTAT‑TTTTAAATT‑TAAAAA‑‑ATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                                 <  2:5005182/128‑1 (MQ=255)
                                                                                                 taaaaaaTTAA‑TTTAAAATTTTAAAAA‑‑ATAG‑‑ATTTTTTTTTTTTTTTTTTATAATGAAAATAAAAATTTTAATTTTTTTGTTTTATAATAAAAAAAAAAAATATAAAAAAAAAAATATTTTTaaaatt                                 >  2:2873225/2‑126 (MQ=255)
                                                                                                  taataattta‑ttTTTAATTTTAAAAA‑‑ATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                <  1:4049984/124‑1 (MQ=255)
                                                                                                  aaaaaaTTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAATAATAAATTTTATGTTTTTTGTTGAATAATAATATAAAAAAATAAAAATTAAAAAATATTTTTaaaataa                                >  2:3984855/1‑125 (MQ=255)
                                                                                                   ataatttaa‑ttTTAACTTTTAAAAA‑‑ATTTT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                <  1:334409/123‑1 (MQ=255)
                                                                                                     aaattaa‑ttTGAACTTTTAAAAA‑‑ATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑Ac                           <  1:5927723/127‑1 (MQ=255)
                                                                                                      aattaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTAATTTTTTTTGATTTATAATTTTATAAAAAATTATAAAGGAAAAAAAATTTATAATATTAAT‑a                            >  1:4571889/1‑128 (MQ=255)
                                                                                                      aattaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTTATAATTATCTAAAAAAATATAAAGTAAAAAATATTTTTAAAATTAAT‑ACt                          >  2:814380/1‑128 (MQ=255)
                                                                                                      aattaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATGTAAATAAAAATTTTAGTTTTTTTTTTTTATAAGAATATAAAAAAATAAAAAAAAAAAAATATATTAAAAATTAAT‑aaa                          >  2:1688152/1‑126 (MQ=255)
                                                                                                       attaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTTTATTTTAAATATAATTTTTTTTTTTTTTGTTGTCTAAGTAAATAAAAAAATAAAATTAAAAAAATATTTTTATAATTaaaaa                            >  2:1250798/1‑125 (MQ=255)
                                                                                                       attaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTAAAATTATAAAAAAAAAAAAAAAGTAAAAAATATTGTTAAAAGTATA‑ACTaaa                       >  2:1389128/1‑128 (MQ=255)
                                                                                                        ttaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATATTTAAAAAAAAAATTTTATTTTTTTTTTTTTATAATTTTAAAAAAAAAT‑TAAAATAAAAAATATTTTTaaaaattaaataaaa                        >  1:6476245/1‑117 (MQ=255)
                                                                                                        ttaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTATAATTTTCTAAAAAAATAGAATGGAAAAAATATTTTTAAAATTAAT‑ACTaa                        >  1:5840260/1‑128 (MQ=255)
                                                                                                        ttaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATGTAAATATAAATTTTTGTTTTTTTTTTGTGTAATTATATAAAAAAATAAAAAGTAAAAAAAATTTTTaaatttaaaaataa                         >  2:2751943/1‑117 (MQ=255)
                                                                                                        ttaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTAGGTTTTTTTTTGTATAAGTAAATAAAAAAATAGAAAGTAAAAAATATTTTTAAAATTAAT‑ACTaa                        >  2:5795655/1‑128 (MQ=255)
                                                                                                        ttaa‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑‑‑‑TTTTTTTTTTTTTTAATAATGGAAATATAAATTTTAGTTATTTTTTTGTATAATTTAATAAAAAAAAAGAAAGTAAAAAATATTTTTAAAATTAAT‑ACAaaaa                      >  2:4252340/1‑128 (MQ=255)
                                                                                                          aa‑ttTTAAATTTTTAAAA‑‑ATATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTaa                        <  1:2780314/128‑1 (MQ=255)
                                                                                                           a‑ttTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTAGTTATTTTTTTGTATAATTATATAAAAAAATAGAAAGTAAAAAATATTTTTAAAAGTaaaaaaaaa                        >  2:5698025/1‑121 (MQ=255)
                                                                                                           a‑ttTGAACTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATATTGGAAATATAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAAATAGAAAGGTAAAAATTTTTTTAAAATTATT‑ACTaaaa                      >  1:3056460/1‑128 (MQ=255)
                                                                                                                 aaCTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAATTATAATTTTTTGGTTTTTTTTTTTGTAATTTTTTAAAAAAATATAAAGGAAAAAATTTTTTTAAAATTATT‑AATAAAtttatt                 >  1:718129/1‑128 (MQ=255)
                                                                                                                  aCTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATTTATTTTTTTGTATAAGTATATAAAAAAATTAAAATTAAAAAATTTTATAAAAATAAAT‑AATAAAaatatt                 >  1:6258033/1‑128 (MQ=255)
                                                                                                                   cTTGTAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATATTGGAATAATAAATTTTATTTATTTTTTTTTAATATTATCTAAAAAATTAGAAAGTAAAAAA‑AATGTTAAAAAGAATAAAAAAAattattaa               >  2:3272698/1‑126 (MQ=255)
                                                                                                                       tAAAAA‑‑ATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAAAATAATTTTTAGTTATTTTTTTGTATAAGTATATAAAAAAATATAAATGAAAAAAATTTTTTAAAAGTAAT‑AATAAAATTTTTTAAttt           >  1:1291363/1‑126 (MQ=255)
                                                                                                                                tAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAAATTAAATTTTTGGTTTTTTGTTTTATAATTAAATAAAAAAATATAATGTAAAAAATATTTTAAAATATAAT‑AAAAAATTTTTTTATTTttaaata     >  2:6221691/1‑128 (MQ=255)
                                                                                                                                   |                                                                                                                                 
GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTAAAAGAATTAA‑TTTGAACTTGTAAAAA‑‑ATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.