New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437881 =748 (0.240)854 (0.350) 172/204 5.1 62.6% intergenic (‑185/+237) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437884 416 (0.170)intergenic (‑188/+234) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1498 total aligned reads displayed.

ACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437757‑438012
                                                                                                                                                |                                                                                                                                        
   tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatata                                                                                                                                       >  2:1641856/1‑128 (MQ=255)
   tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑ATAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatata                                                                                                                                       >  2:4972176/1‑128 (MQ=255)
    aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatat                                                                                                                                      >  1:2468491/1‑128 (MQ=255)
      ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatat                                                                                                                                    >  1:4040960/1‑128 (MQ=255)
        ctacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatat                                                                                                                                  >  1:6264356/10‑128 (MQ=255)
         tacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatata                                                                                                                                 >  2:4089321/9‑128 (MQ=255)
          acaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatat                                                                                                                                >  1:4425780/8‑128 (MQ=255)
              ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatat                                                                                                                            <  1:3908826/128‑1 (MQ=255)
                tttaGTTTAATTTTTAATAAATATTTTTTATATAAATTTTATTTTTTAAATATATATTTTAGTATATGAAGCAAATAAAAAAACTCAATATTAACTATAGAG‑‑‑‑TTTAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatat                                                                                                                          <  2:2618321/125‑1 (MQ=255)
                gTAAGTTTCATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatat                                                                                                                          <  2:3754475/128‑1 (MQ=255)
                gTAAGTTTCATTTCTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatat                                                                                                                          >  1:5657202/1‑128 (MQ=255)
                 ttattttCATATTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata                                                                                                                         <  2:2733970/124‑1 (MQ=255)
                  tattttAATTTATAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTATGATATGAATCAAATCAAAAAAATCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑t                                                                                                                    <  2:1748559/125‑1 (MQ=255)
                    ttttGATTTTTTATATATATTATATATAAAAAATTTATATTTAAAATAAATATATTTTTTTATCTATCAAATAAAAAAACTCTATATTAAATATATAG‑‑‑‑ATAAA‑‑‑‑‑‑T‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tat                                                                                                                  <  2:3620860/127‑1 (MQ=255)
                     tttttttttttATAAATATTATATATAAAAAATTTATTTTTTAAATAAATATTTTATTATAATAATATAAGAAAAAAAATCCATATATAATATATAG‑‑‑‑ATAAT‑‑‑‑‑‑T‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tata                                                                                                                 <  2:4834062/123‑1 (MQ=255)
                        cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCACCATATTACCTATAGAG‑‑‑‑ATAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatat                                                                                                              <  1:4305936/128‑1 (MQ=255)
                        cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatat                                                                                                              >  1:1385661/1‑128 (MQ=255)
                         aTTTTTTATATATATTATAAATATATATTTTTTTTTTTAAATAAATATTTTATTTAATTTATAAAATAAAAAAAATCAATATTATCTATAGAG‑‑‑‑TTATT‑‑‑‑‑‑T‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatata                                                                                                             <  1:1937046/128‑2 (MQ=255)
                         aTTTTTATAAAATATTAGAAATAAACATTGTATTTTTTAAATATATATTTTATGATATGATTAACAGCAAAAACCTCCATATTAACTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑T‑‑‑‑‑‑agatatatatatatatatata‑‑‑‑tatatata                                                                                                             <  1:6091545/128‑2 (MQ=255)
                         aTTTTTAATAAATATTATAAATAAAATTTTTATATATAAAATAAATATTTTATTAAATTAATCTAATATAAAAAAACAATATAAAATATATAG‑‑‑‑TTAAT‑‑‑‑‑‑T‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatata                                                                                                             <  1:5861007/128‑2 (MQ=255)
                         aTTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATATTATTAAATTAAGAAAATCAAAAAACTCCATATTAACTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑T‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatata                                                                                                             <  2:891959/128‑2 (MQ=255)
                         aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATAATACATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatataaatatagatata‑‑‑‑tatatata                                                                                                             >  1:2578453/1‑127 (MQ=255)
                           atttAATAAATATTAGAAAAAAAAATTTTATTTTTAAAATAAATATTTTATCAAATTAATCAAATCAAAAACCTCAATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatata                                                                                                           <  1:2964545/127‑4 (MQ=255)
                            tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatat                                                                                                          >  1:1142978/1‑124 (MQ=255)
                             ttAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAAGAAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatatg                                                                                                         <  1:6357823/128‑6 (MQ=255)
                               ataaaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATATTTTGATATGAAGCAAATCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatgcaag                                                                                                       <  2:3358630/125‑8 (MQ=255)
                               aataaataTTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGAt                                                                                                 <  1:1003283/128‑1 (MQ=255)
                               aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatgcaag                                                                                                       <  1:3820033/128‑8 (MQ=255)
                               aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatattatag                                                                                                       >  2:6641545/1‑121 (MQ=255)
                               aaaaaataTTAGAAATAAAAAATGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCg                                                                                                   <  1:4738704/125‑1 (MQ=255)
                                attaataTTATATATATATATTGTTTATTTAAAATATATATTTTATTATATGAATCTAAGCTAAAACCTACATATTAAATATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGa                                                                                                  <  2:4342838/125‑1 (MQ=255)
                                   tatatTATATATAAAAATTGTATTTTTAAAATATATATTTTTTTAAATTAATCAAATCAAAAACATCCATATAACATATATAG‑‑‑‑ATAAT‑‑‑‑‑‑T‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatatgcaagcg                                                                                                   <  1:5051298/127‑12 (MQ=255)
                                    atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTAACTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatattaaaaaga                                                                                                  >  2:1407226/1‑116 (MQ=255)
                                    atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatattcaagcta                                                                                                  >  2:2322978/1‑116 (MQ=255)
                                    atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑atatatatatatatatatata‑‑‑‑tatatatatatgcaagaga                                                                                                  >  1:5982257/1‑116 (MQ=255)
                                       ttAGAAATAAAAATTTTATTTTTAAAATATATATATTAGGAAAATAAGAAAATCAAAAACATCCATATTAACTATAGAT‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATaa                                                                                         <  1:4850752/128‑1 (MQ=255)
                                       ttAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGAAAAAAACTCAATATTACATATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCAt                                                                                           <  2:6443611/128‑1 (MQ=255)
                                         ataaaaaaaaATTTTATTTTTAAAATAAATATTTTATGAAATTAATAAAATCAAAAACCTCTATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCAt                                                                                           <  2:566874/126‑1 (MQ=255)
                                           ataTAAAAATTGTTTTTTTAAAATAAATATATTATTAAATTAAGCAAAGCAAAAAAATACATATTATCTATATAG‑‑‑‑TTATT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCAt                                                                                           <  2:4439612/126‑1 (MQ=255)
                                            aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATGTATATAT‑‑‑‑GCAAGCGATCAGCATa                                                                                          <  1:5450048/128‑1 (MQ=255)
                                             aTAAAAATTTTATATTTAAAATAAATATTTTATTAAATTAATCAAATCAAAAAACACAATATTAAATATAGAG‑‑‑‑TTAATTATA‑‑T‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATaa                                                                                         <  2:5239123/128‑1 (MQ=255)
                                             aTAAAAATTGTTTTTTTATAATATATATTTTATTAAAAGAATAAAATCTAAAAAAACAATATTATATATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATaaaa                                                                                       <  1:3507566/128‑1 (MQ=255)
                                             aTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATaa                                                                                         <  1:6164509/128‑1 (MQ=255)
                                              tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAAt                                                                                      >  1:2276082/1‑128 (MQ=255)
                                              tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCTATCAGCATATAATgg                                                                                    >  2:5564957/1‑128 (MQ=255)
                                              tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑ATAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTg                                                                                  <  1:4529777/128‑1 (MQ=255)
                                                    ttGTATTTTTAATATAAATATTTTAGGAAATGAATAAAAGAAAAAACCTACATATTACCTATAGAG‑‑‑‑ATAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                          <  1:1842273/128‑1 (MQ=255)
                                                      gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑TCAAGCTCTCAGCATAAACTGGTTAAAt                                                                              >  2:2952773/1‑128 (MQ=255)
                                                        aTTTTTAAAATATATATTTTTTGAAATAAATAAAATAAAAAAACACCATATTCACTATAGAGATATTTATA‑‑‑‑‑T‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  1:890837/128‑1 (MQ=255)
                                                         tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GAAAGCGATCAGAATAAAATATTGAATTTTAGa                                                                         >  1:2159197/1‑128 (MQ=255)
                                                             tAAAATAAATATTTTATCTAATTAAGAAAATCAAAAAACTCTATATTAACTATAGAG‑‑‑‑TTAATTATATAT‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTa                                                                           <  2:6109500/128‑1 (MQ=255)
                                                             tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GAAAGCGATCAGAATAAAATTGTGATATTTaagat                                                                       >  1:3627184/1‑124 (MQ=255)
                                                               acaaatatatTTTATGATATGTTGATAATCACAAACATCCCTATTAGCTCTAGAT‑‑‑‑TGTAT‑‑‑‑‑‑A‑‑‑‑‑‑TGATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGCTCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:2858966/122‑1 (MQ=255)
                                                                 ataaataTTTTATGAAATTAATCAAATCAAAAACCTCAATATTACATATAGAG‑‑‑‑TTAATTA‑‑‑‑T‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:1632845/128‑1 (MQ=255)
                                                                   atatatTTTAGTAAATGAATCAAATCAAAAAAATCCATATTAAATATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:5992583/126‑1 (MQ=255)
                                                                   aaattTTTTATGAACTGATGCATATCAAACACCTCCCTAATACCTCTAGAG‑‑‑‑TGATTGA‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGGGTTCAGCATAAAATGGTGAAATTTAGATCGGAggt                                                                 <  1:3734871/128‑3 (MQ=255)
                                                                    aataTTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATATATATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                    <  1:5166606/128‑1 (MQ=255)
                                                                     atatTTTATTAAATGAATCAAACAAAAAACCTCAATATTAACTATAGAGTTTTTTATATA‑‑‑‑‑T‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:2076960/128‑1 (MQ=255)
                                                                     atatTTTAGGAAATCAAGCAAAGAAAAAACCTAAATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATATATATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:1512748/128‑1 (MQ=255)
                                                                         tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCTCTCAGCATAAAATGGTCAAATTTAGATCTGAGTTGGTCtt                                                           >  1:4978689/1‑128 (MQ=255)
                                                                         tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATATAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         >  1:5273598/1‑128 (MQ=255)
                                                                         tgaaggaaaggaaGAACACGAAACAGCACCAAATTAGGTATAGTG‑‑‑‑TTAAA‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATAAAT‑‑‑‑GCTAGCGTTCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGGCTTaa                                                         <  2:5913294/125‑1 (MQ=255)
                                                                          ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATATATAAGATAGCTATCAGCAAAAAATTGTGATATTTATATCTGAGtttctct                                                            >  1:3094650/1‑123 (MQ=255)
                                                                             tgacatctagcaaatcaaAAACCTCCATATTAACTATATAG‑‑‑‑ATAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  2:2468491/120‑1 (MQ=255)
                                                                             ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATAGAGAATTTTAGATCTGAGTTGGTCttta                                                         >  2:1244910/1‑126 (MQ=255)
                                                                                 aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GAAAGCGCTCAACATAAAATGTTGAATTTTAGATATGATTTTATCTTAAAttt                                                     >  1:3397040/1‑128 (MQ=255)
                                                                                 aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑CCAAGCTATCATCATAAAATTGATAAATATATATCTGAGTTAATCTTAAAttttt                                                   >  2:6302948/1‑126 (MQ=255)
                                                                                    aagcaaagcaAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTa                                                  >  1:3235126/1‑128 (MQ=255)
                                                                                       caaagcaaaAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGCTCTGAGTTTGTCTTAAATTTGTAGtt                                               >  2:3035127/1‑128 (MQ=255)
                                                                                         aagcaaaAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GAAAGCGATCAGCATAAAATGGTGAAATTTAGATCAGAGTTGGTATTAAATTTGTATTTtata                                           >  2:3864325/1‑128 (MQ=255)
                                                                                          agcaaaAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAtttttt                                            >  2:3236913/1‑128 (MQ=255)
                                                                                              aaaaCCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATTTTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                      >  2:3959938/1‑128 (MQ=255)
                                                                                               aaaCCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑TAAAGCTATAAGAATAAAATTTTAAAATATAGATATTAGTTTGTATTAATTTTATAGTTttttttta                                       >  2:4682966/1‑128 (MQ=255)
                                                                                                 atatctatatTATCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                     <  1:970380/122‑1 (MQ=255)
                                                                                                   cTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCACGCGATCAGCAAAAAATGGAGATATTTATATCTGAGTGTGTCTTATATTTTTAGTTTTTATTTATAGt                                   >  2:5770896/1‑128 (MQ=255)
                                                                                                   cTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAA‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTATCTTAAATTTGTTGTTTTTATTTATTGTTtat                               >  1:1704412/1‑128 (MQ=255)
                                                                                                     ccATATTATCTAGAGAG‑‑‑‑TGATATA‑‑‑‑‑T‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               <  1:2853437/128‑1 (MQ=255)
                                                                                                     ccATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GAAAGCGATCATCATAAAATGTTGATATATATATATGTGTTTGTCTAAAATTTGTAGTTTTTATTTATAtttt                                 >  1:2024114/1‑128 (MQ=255)
                                                                                                     ccATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               >  1:4181911/1‑128 (MQ=255)
                                                                                                     ccATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATAAT‑‑‑‑CACGCGATCAGCATAAAATGGTAAATTATAGATCTGAGTTGGTATTATTTTTGTATATTTTATATATAGTATATAAAg                           >  1:5564566/1‑128 (MQ=255)
                                                                                                      cATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATATATAGtata                                >  2:1912165/1‑128 (MQ=255)
                                                                                                      cATATTACATATAGAG‑‑‑‑ATAATTA‑‑‑‑T‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                              <  1:6504334/128‑1 (MQ=255)
                                                                                                          ttACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GATAGAGATCAGAATAATATGGTTATATTTAGATCTGAGTGGGTATTAAATTTTTAGTTTTTTTTTAGATTTtttata                            >  2:4214331/1‑126 (MQ=255)
                                                                                                           tACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                     >  1:1265387/1‑128 (MQ=255)
                                                                                                            aCCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GATAT‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTTAAATTTAGATCTGTGTTTGTATTATATTTGTAGTTTTTATTTATATTTTATAAAGt                          >  2:3469217/1‑128 (MQ=255)
                                                                                                            aCCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTg                                                                                  <  1:741969/70‑1 (MQ=37)
                                                                                                             ccTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCTATCAGCATAAAATGTTGAAATATATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAAGTtaata                     >  1:5768038/1‑128 (MQ=255)
                                                                                                                 taGAG‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATATAGATCTGATTTTGTCTTAAATTTGTATTTTTTATTTATATTTTATAAATTTaataat                   >  2:5410947/1‑128 (MQ=255)
                                                                                                                  agag‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCTAGCGATCAGCATAAAATGGTGATATTTAGATATGAGTTGGTCTTAAATTTGTTGTTTTTATTTATAGTTTATATTGATaataata                  >  2:755026/1‑127 (MQ=255)
                                                                                                                   gag‑‑‑‑TTAAT‑‑‑‑‑‑GAT‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTATTATATTTGTAGTTTTTTTTTATAGTTTATATAGTTAATAtttt                 >  2:4539494/1‑128 (MQ=255)
                                                                                                                                    atgatatatatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg               <  2:5114396/119‑1 (MQ=255)
                                                                                                                                     ttaatgatatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑ACAAGAGATCAGAATAAAATTTTGAAATTTAGATCTGAGTTGGTATAAAATATGTTTTTTTTATTTATATTTTATAAATATTATAATTTata              >  2:2194900/9‑126 (MQ=19)
                                                                                                                                     aatgatatatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑TCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTATATAATGTTAATAATATAGa              >  2:3125274/9‑128 (MQ=38)
                                                                                                                                       tgatatatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCTATCAGAATAAAATTGTTATATTTATATCTGAGTTGGTATTATATTTTTTTTTTTTATTTATTTTTTATAAATTTAATTATTTATAtt            >  1:2710212/7‑128 (MQ=255)
                                                                                                                                          tatatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt         <  1:6595869/125‑1 (MQ=255)
                                                                                                                                          tatatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt         <  2:1145209/125‑1 (MQ=255)
                                                                                                                                            tatatatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCTATCAGCAAAAAATTGTGAAATATAGATCTGAGTTTGTCTTAAATTTTTAGTTTTTATATATATTATATAAATTAAATAATTTATATTTTTaa       >  2:1543818/2‑128 (MQ=255)
                                                                                                                                               atatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCGATCAGAATAAAATGGTGAAATTTATATCTGAGTTTGTATTAAATTTGTATTTTTTATTTATATTTTATAAATTTAATAATTTCTATTTTTAatat    >  2:6531066/1‑128 (MQ=255)
                                                                                                                                               atatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCGATCAGAATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTTGTTTTTATTTATATTTTATAAATTTAATAATTTATATTTTTAatat    >  2:6201841/1‑128 (MQ=255)
                                                                                                                                                tatatatatatatatata‑‑‑‑tatatat‑‑‑‑GCAAGCGATCAGAATAATATTGTGATATTTATATCTGAGTTGGTGTTTTATTTGTAGTTTTTATTTATTTTTTATATAGTTAATTATTTATATTTTTAATAtt   >  1:2378601/1‑128 (MQ=255)
                                                                                                                                                |                                                                                                                                        
ACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATA‑‑‑‑TATATAT‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437757‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.