New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =727 (0.160)2073 (0.570) 203/208 1.0 77.5% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 608 (0.170)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

Only 100 of 3459 total aligned reads displayed.

GTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311028‑311280
                                                                                                                             |                                                                                                                                 
accagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattat                                                                                                                                 <  2:6493016‑M1/3‑1 (MQ=255)
accagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattat                                                                                                                                 <  1:7970938‑M1/3‑1 (MQ=255)
accagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgaatcaaaacatatataacatacattcattat                                                                                                                                 <  1:8589591‑M1/3‑1 (MQ=255)
      tgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatat                                                                                                                           >  2:2310710‑M1/120‑128 (MQ=255)
      tgtaataactaatcaaaaagaacttaaaattgtaattaactttttcatattacacaccccttattaaaaaataaaatacttgttacaaacgattcaaaacatatataacatacattcattatatatat                                                                                                                           >  1:6929886‑M1/120‑128 (MQ=255)
       gtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatata                                                                                                                          <  2:3936111‑M1/10‑1 (MQ=255)
       gtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatataaaccatacattcataatatatcta                                                                                                                          <  2:9267860‑M1/10‑4 (MQ=255)
       acactcaaccAAATCAACATAAAAATCAAAATAACTATTTCATCTAACACACCCCTTATTAAAAAATAAAATACTAGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatata                                                                                                                          <  1:6355508/120‑1 (MQ=255)
         aataactaatccaaattaactaaaaattgtaattaactttttaattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatata                                                                                                                        >  1:874038‑M1/117‑128 (MQ=255)
             actaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatata                                                                                                                    <  1:4226320‑M1/16‑1 (MQ=255)
             actaatacaaatgaaattaaaattttaattaactttttcattttacacaccacttattaaaaaataaaataattgttacataagattcaaaacatatataacatacattcattatatatatatatata                                                                                                                    >  2:3611553‑M1/113‑128 (MQ=255)
              ctaatctaaatgaaattaaaaatgtaattaactatttcattttacacacaccttattaaaaaataaaatacttgttaaatacgattcaaaacatatataacatacattcattatatatatatatatat                                                                                                                   >  2:9387837‑M1/112‑128 (MQ=255)
               taatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatat                                                                                                                         <  2:7731254‑M1/11‑1 (MQ=255)
                aatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacataatattcaaaacatatataacatacattcattatatatatatatatatat                                                                                                                 >  2:5863280‑M1/110‑128 (MQ=255)
                 atccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatata                                                                                                                <  1:3583061‑M1/20‑1 (MQ=255)
                 aaattaaattAAAATTTTAATTAAATATTTAATTTTAAACACACCTTATTAAAAAATAAAAAAATTTTTACATAATATTAAAAACATATATAAAATAAATTCAAaatatatatatatatatatatata                                                                                                                <  1:139697/128‑1 (MQ=255)
                  tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                               <  1:819948‑M1/21‑1 (MQ=255)
                  taaaaattaaattaaaattttaattaaatttttaattttaaacaccccttattaaaaaataaaatacttgttacatacgattctaaacatatataacatacattctttatatatatatatatatatat                                                                                                               >  2:2864810‑M1/108‑128 (MQ=255)
                  aacaaattaaattaaaaatgtaattaaatttttcattttacacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                               >  2:729108‑M1/108‑128 (MQ=255)
                   ccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatata                                                                                                              <  2:6041004‑M1/22‑1 (MQ=255)
                   ccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatata                                                                                                              <  1:5672584‑M1/22‑1 (MQ=255)
                      aatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑att                                                                                                         <  1:7079117‑M1/25‑2 (MQ=255)
                       atgaacttaaaattgtaattaactttttcattttacacaccacttattaaaaaataaaatacttgttacatacgattcaaaacataaataacatacattcatTATATATATATATATATATAAa‑‑attc                                                                                                        <  1:5309376‑M1/26‑3 (MQ=255)
                        tgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatataatgaatgta                                                                                                         >  2:7156835‑M1/102‑119 (MQ=255)
                        tgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATatata‑‑aagaa                                                                                                       <  1:4963463‑M1/27‑5 (MQ=255)
                        tgaacttaaaattgtaattaactttttcattttacacaacccttatttaaaaataaaatacttgttacatacgattcaaaacatatataaaatacattcattataattatatatatatatattaaaaa                                                                                                         <  2:5693834‑M1/27‑7 (MQ=255)
                         ttAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatataaatcaata                                                                                                        >  1:2421967/1‑120 (MQ=255)
                            aaaTTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGt                                                                                                 <  2:1094219/128‑1 (MQ=255)
                             ttaaaattttaattaactttttcattttacacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATg                                                                                                  >  2:4645162‑M1/97‑128 (MQ=255)
                               aaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATGTa                                                                                                <  2:5176489‑M1/34‑1 (MQ=255)
                                aaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATTTaa                                                                                               <  2:1963515‑M1/35‑1 (MQ=255)
                                  tAATTAAATTTTTAATTTTACACACAACTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACATATATAAAATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGa                                                                                           <  2:620592/128‑1 (MQ=255)
                                      taattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGaaa                                                                                         <  1:5497348‑M1/41‑1 (MQ=255)
                                           aactttttcattttacacaccccttattaaaaaataaaatactttttacatacgattcaacacatatataacatacattcatTATATATATATATATATATATA‑‑TAGATATATATAAATTAaaatagt                                                                                    <  2:5023257‑M1/46‑3 (MQ=255)
                                           aactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGaaaatattgt                                                                                  <  2:7004643‑M1/46‑4 (MQ=255)
                                             ctttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑TAGCAATATATAAATAaaaatatttt                                                                                  <  1:6203296‑M1/48‑4 (MQ=255)
                                             ctttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATTTAAATGAAAATatgtt                                                                                  <  1:6030685‑M1/48‑3 (MQ=255)
                                                   ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTataata                                                                            >  1:5823698/1‑128 (MQ=255)
                                                   ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGATataatatc                                                                          >  1:9265369/1‑126 (MQ=255)
                                                        tacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATT‑‑ATGAAATATTTTAATGAAAATATGTTATAAtagctac                                                                       <  1:4779822‑M1/59‑4 (MQ=255)
                                                        tacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGcaaa                                                                       <  1:2259834‑M1/59‑2 (MQ=255)
                                                           acaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGAaacctt                                                                    <  1:6708992‑M1/62‑3 (MQ=255)
                                                            ccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑ATGCAATATTTAAATGAAAATATTTTATAATATCAACCGtt                                                                   >  2:4466502/1‑128 (MQ=255)
                                                             accccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATTTTATAATAGAAACCGttt                                                                  <  1:9631430‑M1/64‑1 (MQ=255)
                                                             accccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAATAGAAACCtttt                                                                  <  2:3254263‑M1/64‑1 (MQ=255)
                                                                attaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                             <  1:3011354/128‑1 (MQ=255)
                                                                  ttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                             <  2:6649611‑M1/69‑1 (MQ=255)
                                                                   tattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAAAATGTAAATTAAAATATGAAATAAAAGCAACATTTTAtaaac                                                            <  1:2811806‑M1/70‑2 (MQ=255)
                                                                   tattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                            <  1:1903372‑M1/70‑1 (MQ=255)
                                                                       aataatataTTTGTTAAATATTATTTAAAAAATATATATAATATATAAATTATTTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTaaaaa                                                      <  2:4302356/128‑1 (MQ=255)
                                                                        aaaaataaaatacttgttacatactattcaaaacatatataaaatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaa                                                       >  2:7558922‑M1/54‑128 (MQ=255)
                                                                          aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑AATCAATATGTAAATCAAAATATGATATAATATAAACCGTTTATAAAGTaaaaaa                                                     >  2:180104/1‑128 (MQ=255)
                                                                           aataaaatacttgttacatacgatttaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                                    >  2:2496639‑M1/51‑128 (MQ=255)
                                                                           aataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATTTATA‑‑ATAAAATATGTAAATGAATATATGGTATAATATCAAAAGTATATAAAGaaaaaaaa                                                    <  2:9107445‑M1/78‑1 (MQ=255)
                                                                           aataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                                    <  1:3212310‑M1/78‑1 (MQ=255)
                                                                           aataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATAAA‑‑ATGCAATATTTAAATGAAAATATTTTAAAATAACAAACGTTTATaaaaaaaaaaaa                                                    <  2:2688740‑M1/78‑1 (MQ=255)
                                                                           aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATTCAATATGTAAATGAAAATATGTTATAATAGCAACATTTTATAAATTAAAAAAATa                                                  >  2:7421218/1‑128 (MQ=255)
                                                                            ataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAAt                                                   <  1:4435942‑M1/79‑1 (MQ=255)
                                                                              aaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATTGTATAATATCAAACGATTATAAAGAAAAAAAAtac                                                 <  1:7416186‑M1/81‑2 (MQ=255)
                                                                              aaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAAGTAAAAAAATAg                                                 <  1:4004132‑M1/81‑1 (MQ=255)
                                                                                aacacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑‑‑ATTCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                             <  2:6815268‑M1/83‑1 (MQ=255)
                                                                                    cttgttatataatattaaaaacatatataaaataaattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           >  2:3408751‑M1/42‑128 (MQ=255)
                                                                                     ttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATGAAAATAAAAATATGAAATAATATCAAACTTTTATAAATTAAAAAAATATTAAatat                                          <  2:1251542‑M1/88‑1 (MQ=255)
                                                                                     ttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑AAGCAATATGTATATGAAAATATTGTATAATATCAAGCTTTTATAAAGTAAAAAAATAGTAAatat                                          <  1:9446293‑M1/88‑1 (MQ=255)
                                                                                     ttgttacataagattcaaaaaatatataacataaattaatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAaaaaagtagtatattt                                          >  2:8066767‑M1/41‑123 (MQ=255)
                                                                                      tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                         <  1:4628055‑M1/89‑1 (MQ=255)
                                                                                      tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGAACCAGTTTATAAAATAAAAAAATATTAAAaata                                         <  1:2138101‑M1/89‑1 (MQ=255)
                                                                                      tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGAAACAGTTTATATAGTAAAAAAATAGAAAAtata                                         <  1:1000512‑M1/89‑1 (MQ=255)
                                                                                      tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtact                                       <  1:892077‑M1/89‑1 (MQ=255)
                                                                                       gttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATTAAAATATGTTATAATATCAAACGTTTATAAATTAAAAAAATAGTAAatataa                                        <  2:8593700‑M1/90‑2 (MQ=255)
                                                                                        ttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtact                                       >  2:7902823‑M1/38‑128 (MQ=255)
                                                                                           catacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                    <  1:1172538‑M1/94‑1 (MQ=255)
                                                                                           catacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑‑‑ATGAAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATAAAACTTa                                  <  2:3099508‑M1/94‑1 (MQ=255)
                                                                                            ataagattaaaaaaatatataacataaattaaaTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACtt                                   >  2:4834571‑M1/34‑128 (MQ=255)
                                                                                               cgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAAACTTTTATAAAGTAAAAAAATAGTAAATATAATACTTAtt                                <  1:6538030‑M1/98‑1 (MQ=255)
                                                                                                gattcaaaacatatataacatacattcatTATATATATATATATATA‑‑‑‑‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                           >  1:8380325‑M1/30‑128 (MQ=255)
                                                                                                     caaaaaaaatataacatacattcaATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                         >  2:3004206‑M1/25‑128 (MQ=255)
                                                                                                     cATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCTATATTTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATAATACTTATTTACtaata                        >  2:2160512/1‑128 (MQ=255)
                                                                                                     aaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                          >  1:5142630‑M1/25‑128 (MQ=255)
                                                                                                      aaacatatataacatacattcatTATATATATATATATATATATACAATGCAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATAGTAAATATACTACTTAtttaata                           <  2:8185504‑M1/105‑4 (MQ=255)
                                                                                                      aaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAAATAAAAAAATAGTAAATAAACTAAATATTTACtaat                         <  1:1567082‑M1/105‑1 (MQ=255)
                                                                                                       tatataACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAATATAAAAAGTTAATAAAGTAAAAAAATATTAAATATAATACTTATTTaagatcaga                      >  1:7780979/1‑120 (MQ=255)
                                                                                                          ataACATACATTCATTATATATATATATATATATATATATA‑‑ATTCAATATGTAAATTAAAATATTTTATAATATCAACCGTTTATAAATTAAAAAAATAGTAAATATACTACTTATATAATAATaaaa                     >  2:37941/1‑128 (MQ=38)
                                                                                                          ataACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAACTAAAAAAATAGAAAATATACTACTTATTTACTAATAAAATc                   >  2:9509730/1‑128 (MQ=255)
                                                                                                           tttacatattgcattATATATATATATATATATATATATA‑‑ATGCAATATGTAAATTAAAATATGGTATAATATCAACCGTTTATAAATTAAAAAAATAGAAAATATTCTACTTATTTACTAATAAAAt                    >  2:5377199/12‑128 (MQ=37)
                                                                                                           tatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAAt                    <  1:3382568‑M1/110‑1 (MQ=255)
                                                                                                           tatataacatacattcatTATATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                  >  2:892077‑M1/19‑128 (MQ=255)
                                                                                                            atataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc                   <  1:9101756‑M1/111‑1 (MQ=255)
                                                                                                            atataacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGTTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATAAAACTTAATTACTAATAAAATc                   <  2:8366081‑M1/111‑1 (MQ=255)
                                                                                                              ataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATTAAAATATGGTATAATAGAAACCTTTTATAAAGAAAAAAAATAGTAAATATACTACTTATTTAATAATAAAATCTa                 <  1:7281303‑M1/113‑1 (MQ=255)
                                                                                                              ataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTa                 <  1:2608487‑M1/113‑1 (MQ=255)
                                                                                                              ataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTa                 <  2:8750304‑M1/113‑1 (MQ=255)
                                                                                                                 acatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATATAttt              <  2:6345066‑M1/116‑1 (MQ=255)
                                                                                                                   atacattcatTATATATATAAATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGAAAATATACTACTTATTTACTAATAAAATCTATAtttat          <  1:7622596‑M1/118‑1 (MQ=255)
                                                                                                                    tacattcattatatatatatatatatatata‑‑ATGAAATATGTAAATTAAAATATGTTATAATATCAACAGTTTATAATTTAAAAAAATTTATAATATACTAGTTATTTAGTAATAAAAAATATTttta           >  2:4065949/10‑128 (MQ=19)
                                                                                                                    tacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTttta           <  2:139290‑M1/119‑1 (MQ=255)
                                                                                                                        ttcatTATATATATATAAATATATATA‑‑ATGCAATATGTAAATGAAAATTTGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattta       >  2:1618558‑M1/6‑128 (MQ=255)
                                                                                                                         tcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa      >  1:1736274‑M1/5‑128 (MQ=255)
                                                                                                                             tatatatatatatatatatata‑‑ATTCAATATATATATGAAAATATGTTATAATAGCAAGCGTTTATATTTTAAATAAATTTTATATATACTTCTTATTTAATAAAAAAATCTATTTTTATTTaaaaaa  >  2:5506563/1‑128 (MQ=255)
                                                                                                                             TATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaaa  >  1:3819175‑M1/1‑128 (MQ=255)
                                                                                                                             |                                                                                                                                 
GTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311028‑311280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.