New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 311168424 (0.100)334 (0.080) 124/252 16.7 44.7% intergenic (‑91/‑223) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 311172 = 402 (0.090)intergenic (‑95/‑219) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3624 total aligned reads displayed.

ATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATT  >  CP016816/311041‑311295
                                                                                                                               |                                                                                                                               
actaatacaaatgaacttaaaattgtaattaactttttcattttaaacaccccttattaaaaaataaaatacttgttaaatacgattcaaaacatatataacatacattcattatatatatatatata                                                                                                                                 >  2:1180962‑M1/113‑128 (MQ=255)
 ataatcaaattgaaattaaaattgtttttaactatttaattttacacaacacttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatat                                                                                                                                >  2:7131761‑M1/112‑128 (MQ=255)
  taatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacataccattcaaaacatatataacatacattcattatatatatatatatata                                                                                                                               <  1:8709316‑M1/18‑1 (MQ=255)
   aatccaaatgaacttaaaattttaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacataagattcaaaacatatataacatacattcattatatatatatatatatat                                                                                                                              >  1:9222456‑M1/110‑128 (MQ=255)
    atccaaatgaacttaaaatagtatttaacttttttttttatcacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatata                                                                                                                             >  1:8531668‑M1/109‑128 (MQ=255)
     tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                                            <  1:7739333‑M1/21‑1 (MQ=255)
     tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                                            <  1:3092490‑M1/21‑1 (MQ=255)
     tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacagacattaattttatatatatatatataaat                                                                                                                            <  2:4982085‑M1/21‑4 (MQ=255)
       caaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATaa                                                                                                                          >  1:3500658‑M1/106‑128 (MQ=255)
           tgaacttaaaattgtaattaactttttcattttacacaacccttatttaaaaataaaatacttgttacatacgattcaaaacatatataaaatacattcattataattatatatatatatattaaaaa                                                                                                                      <  2:5693834‑M1/27‑7 (MQ=255)
              acttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAata                                                                                                                   <  2:7412715‑M1/30‑1 (MQ=255)
              acttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAata                                                                                                                   <  1:5065254‑M1/30‑1 (MQ=255)
                   tGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATAAAGAAATATGTaaaa                                                                                                            >  1:4094945/1‑127 (MQ=255)
                       tgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATGTAAATGa                                                                                                          <  2:2884202‑M1/39‑1 (MQ=255)
                        tttaattttttATTTTATACAATATTTATTAAATAATAAAATAATTTTTACATAATATACAAAATATATATATAATAAATTA‑‑ATAATATATATATATATATATATAATGCAATATGTAAATGAAAata                                                                                                     <  1:9594369/123‑1 (MQ=255)
                        gtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATGTAAATGaa                                                                                                         <  2:6980966‑M1/40‑1 (MQ=255)
                        gtaattaaatttttcaatttaaacacaccttattaaaaaataaaatacttgttaaataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                                         >  2:1066286‑M1/89‑128 (MQ=255)
                          aattaactttatcattttaagcacacattattaaaaaaaaaaataattgttacatactattcaaaacatatataaaatacattcatTATATATATATATATATATATAATGCAATATGTAAATGaaaa                                                                                                       >  2:4380200‑M1/87‑128 (MQ=255)
                              aactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATTTATATGAAaatatt                                                                                                   <  2:9247424‑M1/46‑2 (MQ=255)
                               actttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAAATAAATATGTAAATGAaaatattt                                                                                                  <  2:1731079‑M1/47‑3 (MQ=255)
                               actttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATGGtata                                                                                              <  1:8162391‑M1/47‑1 (MQ=255)
                                ctttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATTTATATGAAAATatgtt                                                                                                 <  2:4763537‑M1/48‑3 (MQ=255)
                                ctttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATTTAAATGTAAATatgtt                                                                                                 <  2:2583611‑M1/48‑3 (MQ=255)
                                 ttattcattttaaacacacattattaaaaaaaaaaatatttgttaaatatgattcaaaaaatatataaaatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGta                                                                                                >  2:6030055‑M1/80‑128 (MQ=255)
                                  ttttaaaattacacacccctaattaaaaaataaaataatttttacatacgattaaaaaaatatataaaatacattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtat                                                                                               >  2:237165‑M1/79‑128 (MQ=255)
                                     taattttacacacacattattaaaaaataaaataaattttacatactattcaaaaaatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataat                                                                                            >  1:1709340‑M1/76‑128 (MQ=255)
                                      ttACACACACCTTATTAAAAAATAAAATAATTTTTAAATAAGATTCAAAAAATATATAACATACATTAAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGc                                                                                         <  1:6292714/128‑1 (MQ=255)
                                       attttacacacaacttattaaaaaataaaatacttgttaaatacgattaaaaaaatatataacatatattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAg                                                                                          >  2:3889926‑M1/74‑128 (MQ=255)
                                          ttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAatat                                                                                                    <  1:221717‑M1/45‑1 (MQ=255)
                                           cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATAAAATATGTAAATGAAAATATGGTATAATAgaatcat                                                                                    >  1:593591/1‑122 (MQ=255)
                                              acaccacttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                                                   >  2:3300888‑M1/67‑128 (MQ=255)
                                               cattattaTAAAATAAAATACTTGTTAAATAATATTCAAAAAATATATAAAATAAATTAAT‑‑TATATATATATATATATATATATAATGCAATATTTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                                <  1:1175265/126‑1 (MQ=255)
                                                 ccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                                <  2:2085369‑M1/65‑1 (MQ=255)
                                                  accttattaaaaaataaaataattgttacatactattaaaaaaatatataacataaattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                               >  2:9501158‑M1/63‑128 (MQ=255)
                                                      tattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATTTAAATGAAAATATTGTATAATATCAAACgtttatatat                                                                           <  1:7906928‑M1/70‑4 (MQ=255)
                                                      tattaaaaaataaaaaaatttttaaataccatacaaaaaatatataaaataaattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                                           >  2:9380584‑M1/59‑128 (MQ=255)
                                                       tattaaaaaataaaatacttgttacatactattcaaaacatatatacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                                          >  1:7554976‑M1/58‑128 (MQ=255)
                                                       attaaaaaataaaatactttttacatactattaaaaaaatatataacataaattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                                          >  1:5255815‑M1/58‑128 (MQ=255)
                                                        ttaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATTCAATATGTAATTGAATATATGGTATAATAGAAACCGTTTATAAAGaaaa                                                                       <  2:3029085‑M1/72‑1 (MQ=255)
                                                           ataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTaaaaaa                                                                    >  2:3694212/1‑128 (MQ=255)
                                                           aaaaataaaatacttgttacatactattcaaaacatatataaaatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaa                                                                      >  2:7558922‑M1/54‑128 (MQ=255)
                                                           aaaaataaaatacttgttacataagattcaaaacatatataacatacattcatTAAATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaa                                                                      >  2:2716593‑M1/54‑128 (MQ=255)
                                                             ataataTTTGTTAAATAAGATTTAAAACATATATAACATACATTAAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAAt                                                                  <  2:4551572/126‑1 (MQ=255)
                                                               ataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCTGTTATATAGTAAAAAAAt                                                                  <  2:4007946‑M1/79‑1 (MQ=255)
                                                                taaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACATTTTATAAAGTAAAAAAATaga                                                               <  1:6136494‑M1/80‑2 (MQ=255)
                                                                taaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTATAAAAATAGt                                                               <  2:8904522‑M1/80‑1 (MQ=255)
                                                                 taCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTa                                                              <  2:1357039/128‑1 (MQ=255)
                                                                    ataattgttacataagattaaaaaaatatataaaataaattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                                             >  2:1583702‑M1/45‑128 (MQ=255)
                                                                      acttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATAAAATATTTAAATAAAAATATGTTAAATTAGAAAAAGTTTATATAGTAAAAAAATATTAAat                                                           <  1:7180339‑M1/86‑1 (MQ=255)
                                                                       cttgttacataagattcaaatcatatataaaatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                                          >  1:369214‑M1/42‑128 (MQ=255)
                                                                       atttttaaataatattcaaaacatatataacatacattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                                          >  1:2733471‑M1/42‑128 (MQ=255)
                                                                        ttgttacataagattcaaaaaatatataacataaattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAaaaaagtagtatattt                                                         >  2:8066767‑M1/41‑123 (MQ=255)
                                                                        tACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATTTAAATGAAAATATGTTATAATATCACCAGTTTATAAAGAAAAAAAATAGTAAATAaac                                                       >  1:4706948/1‑128 (MQ=255)
                                                                         tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTAATAAAGTAAAAAAATAGTAAAtata                                                        <  1:1545965‑M1/89‑1 (MQ=255)
                                                                         tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACAGTTTATATAGTAAAAAAATAGAAAAtata                                                        <  1:1000512‑M1/89‑1 (MQ=255)
                                                                           ttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtact                                                      >  2:7902823‑M1/38‑128 (MQ=255)
                                                                             acatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtactac                                                    <  2:7726653‑M1/93‑1 (MQ=255)
                                                                              cataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                                   >  1:4498154‑M1/35‑128 (MQ=255)
                                                                               atacgattaaaaaaatatataaaataaattcaaTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACtt                                                  >  2:7289122‑M1/34‑128 (MQ=255)
                                                                                     aaaCATATATAACATACATTCATTATATATATATATATATATATATATA‑‑‑‑AATATATAAATGAAAATATTTTATAATAACAACCGTTTATATACTAAAAAAATAGAAAATATACAAGTTATATTCtaat                                        >  2:6641818/1‑128 (MQ=255)
                                                                                        aaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                                         <  1:8871690‑M1/104‑1 (MQ=255)
                                                                                        aaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                                       >  2:189063‑M1/25‑128 (MQ=255)
                                                                                         aaacatatataacataaattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                                      >  1:6835575‑M1/24‑128 (MQ=255)
                                                                                          aacatatataacatacattcatTATATATATATATATATATATAATTAAATATGTAAATGAAAATATGGTATAATAGAAACAGTTTATAAAGTAAAAAAATATTAAATATACTACTTATATACtaata                                       <  1:5610777‑M1/106‑1 (MQ=255)
                                                                                          aacatatataacatacattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                                       >  1:7329245‑M1/23‑128 (MQ=255)
                                                                                           atataACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaaa                                    >  1:9068032/1‑128 (MQ=255)
                                                                                           acatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                                      >  1:6490620‑M1/22‑128 (MQ=255)
                                                                                             atatataacatacattcatTATATATATATATATATATATAATTCTATATGTAAATTAAAATATTTTATAATAGCAACATTTTATAAAGAAAAAAAATAGTAAATATTCTACTTATTTACTAATaaaa                                    <  1:1397369‑M1/109‑1 (MQ=255)
                                                                                             ataACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc                                  >  1:252648/1‑128 (MQ=255)
                                                                                               atataacatacattcatTATATATATATATATATATATAATGCAATATTTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc                                  <  1:4827131‑M1/111‑1 (MQ=255)
                                                                                               atataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATAATACTTATTTACTAATAAAata                                  <  1:4318325‑M1/111‑2 (MQ=255)
                                                                                               atataacatacattcatTATATATATATATATATATATAATGAAATATGTAAATGAAAATATGTTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATAAAACTTAATTACTAATAAAATc                                  <  2:8366081‑M1/111‑1 (MQ=255)
                                                                                               atataacatacattcatTATATATATATATATATATAAAGCAATATGTAAATGAAAATATTGTATAATAACAACAGTTTATAAAATAAAAAAATAGTAAATATACTAAATATTTAATAATAaaatata                                <  2:6479657‑M1/111‑4 (MQ=255)
                                                                                                tataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                                 <  1:3256453‑M1/112‑1 (MQ=255)
                                                                                                    acatTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt                           <  2:5476291/128‑1 (MQ=255)
                                                                                                     catacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATAATAATTATTTAATAATAAAATATAtttt                            <  2:81977‑M1/117‑1 (MQ=255)
                                                                                                     catacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtttt                            <  2:533892‑M1/117‑1 (MQ=255)
                                                                                                      atacattcattatatatatatatatatatataATGCAATATGTATATGAAAATTTGGTATAATACCAACCGTTTTAAAAGTAAAAATAGTGAATATAAAATACATATTATCTAATATAAAATAttttt                           >  2:8741126/11‑128 (MQ=16)
                                                                                                      acattaattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt                           <  1:2936230/120‑1 (MQ=255)
                                                                                                       tacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttatt                        <  1:1883833‑M1/119‑1 (MQ=255)
                                                                                                       cattcattatatatatatatatatatatataATGCAATATGTAAATTAAAAAATTGTATAATAGCAACAGTTTATAAAGAAAAAAAATATTAAATATACTAATTATATACTAATAAAATATATAttta                          >  2:5112808/8‑128 (MQ=37)
                                                                                                           atatatatatatatatatatatatataATTCAATATTTAAATTAAAATATTGTATAATAGAAACATTTTATAAAGTAAAAAAATAATAAATAAAATAATTATAAAATAAAAAAATATATTtatataaa                      >  2:8592059/2‑125 (MQ=255)
                                                                                                             catTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa                    <  1:8349015‑M1/125‑1 (MQ=255)
                                                                                                              tcatTATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaa                   >  1:2349576‑M1/5‑128 (MQ=255)
                                                                                                                taatttTATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaaa                 >  2:418478‑M1/7‑128 (MQ=255)
                                                                                                                TATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaaa                 >  1:5427210‑M1/1‑128 (MQ=255)
                                                                                                                TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATATTATATATACTAATTATTTAATAATAAAATCTATTTTTATATaaaaaa                 <  1:5779426‑M1/128‑1 (MQ=255)
                                                                                                                   ATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                                      <  1:9394558‑M1/104‑1 (MQ=255)
                                                                                                                   ATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTa              >  1:2085369‑M1/1‑128 (MQ=255)
                                                                                                                    TATATATATATATATATAATGCAATATGTAAATTAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAATAAAATCTATTTTTATATAAAAAATTaa             <  2:2240913‑M1/128‑1 (MQ=255)
                                                                                                                       ATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt          <  2:5866524‑M1/128‑1 (MQ=255)
                                                                                                                        TATATATATATATAATGCAATATGTAAATGAATATATGGTATAATAGCAACCGTTTATAAAGAAAAAAAATAGTAAATATACTACTTATTTACTATTAAAATCTATTTATATTTAAATAAGTAATTTg         <  2:6311817‑M1/128‑1 (MQ=255)
                                                                                                                         ATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGa        <  1:700229‑M1/128‑1 (MQ=255)
                                                                                                                           ATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaa      <  1:6640216‑M1/128‑1 (MQ=255)
                                                                                                                           ATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaa      >  2:6176132‑M1/1‑128 (MQ=255)
                                                                                                                           ATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTATTTTGaaa      <  2:6793530‑M1/128‑1 (MQ=255)
                                                                                                                            TATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATATAATATAAAAATTATTTCCTAATAAAATCTATTTTTTTTTAAAAaagtaattataaaa     <  2:9073546‑M1/128‑7 (MQ=255)
                                                                                                                            TATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaa     >  1:389181‑M1/1‑128 (MQ=255)
                                                                                                                             ATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaaa    >  2:3169387‑M1/1‑128 (MQ=255)
                                                                                                                               ATATATAATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAatt  >  2:3486994‑M1/1‑128 (MQ=255)
                                                                                                                               |                                                                                                                               
ATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATT  >  CP016816/311041‑311295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.