New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =1148 (0.640)186 (0.120) 75/220 36.5 16.2% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 919 (0.590)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1321 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTAAAAGAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                  |                                                                                                                                
  atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCtttttt                                                                                                                                >  1:2075855/1‑128 (MQ=255)
       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttt                                                                                                                           >  1:2930213/1‑128 (MQ=255)
       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttt                                                                                                                           >  1:3755858/1‑128 (MQ=255)
        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCtttttttttttt                                                                                                                          >  1:2540965/1‑128 (MQ=255)
             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttttttttt                                                                                                                     >  2:3838608/1‑128 (MQ=255)
              tAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCtttttttttttttttttt                                                                                                                    >  1:3619749/1‑128 (MQ=255)
                aattatagccattGTATGAATTATTAACAAACTAAAAATATTTTCTTTTTAATTA‑TTTTTTTTATT‑TTCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATATCtttttttttttttttttttt                                                                                                                  <  2:2639333/117‑2 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttttttttttata                                                                                                                 >  2:2958287/1‑125 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGATTTTTTTTTTTTTTTTTTtaa                                                                                                                 >  1:1916564/1‑127 (MQ=255)
                  ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTaata                                                                                                                >  2:1356397/1‑128 (MQ=255)
                   tATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGAttttatttttatttttatataat                                                                                                               >  2:556094/1‑121 (MQ=255)
                    aTCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATATCtttttttttattttttttatattt                                                                                                              >  1:2819925/1‑122 (MQ=255)
                     tctcaattttATTAATTATTTATAAAATAAAAAAAATTTATTTTTATTTT‑TTTTTTTTATA‑TTCAAAATTATAAAAAATTAATTTT‑TAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATgg                                                                                                            <  2:1195595/119‑1 (MQ=255)
                     tcgccattGTATGAATTATTAAAAAACTAAAACTTTTATCTTTTTATAAT‑TTTTTTGTAAA‑TGCAAAATTTTAAAAAAATAAATTG‑AACTTGTAAAAAAAAGC‑TTTTTTTTTTTTTTTTTTATAATgg                                                                                                            <  1:704888/122‑1 (MQ=255)
                      cgaaattttATGAATTAGTAATAAAATAAAAATATTTTCTATTTAGATA‑TTTTTTGTATA‑TTCAAATTTTTAAAAAATTAATTTT‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGa                                                                                                           <  1:1720060/120‑1 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATgta                                                                                                           >  1:3535633/1‑126 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGAtttttttttttttttaaaaattaaaa                                                                                                            >  1:2615155/1‑117 (MQ=255)
                       gCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTtaaattaaa                                                                                                           >  1:864931/1‑121 (MQ=255)
                        cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatttaaat                                                                                                          >  1:287197/1‑120 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTATTTTTTTTTATAATAGaaaa                                                                                                        >  1:1973069/1‑127 (MQ=255)
                           gtttATTAATTATTAACAAAATAAAAATATTTTTTTTTTATTTT‑TTTTTTTTATA‑TTCAAATATTTTAAAAATTAAATTT‑TAATTTTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTATAATGGAAatat                                                                                                      <  2:1747690/125‑1 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAAt                                                                                                  >  1:2202641/1‑128 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAAtt                                                                                                 >  1:3262987/1‑128 (MQ=255)
                                tttattattAATTAAATAAAAATATTATATTTTTATATA‑TTTTTTTTATA‑TTCAAAATTTTAAAAAATTAATTTT‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  2:2285232/125‑1 (MQ=255)
                                tGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTGTATATATAAAt                                                                                                  >  1:3221663/1‑128 (MQ=255)
                                 gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATTAAAAttt                                                                                                >  2:1902540/1‑128 (MQ=255)
                                 gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AAATTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATAAAAATATAAAtt                                                                                                 >  2:257773/1‑128 (MQ=255)
                                  tattattAATAAAAAAAAAATATTATTTTTTTTTTTA‑TTTTTTTTATT‑TTTAAATTTTTAAAAAATTTATTTT‑AAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAttt                                                                                                <  1:2454488/127‑1 (MQ=255)
                                  aaTTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAaaatttaaattta                                                                                               >  1:105655/1‑127 (MQ=255)
                                   attattAATAAACTAAAACTATTATATTTTTATTTT‑TTTTTTGTTTA‑TTCAAATTTTTAAAAAATTATTTTG‑AAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTa                                                                                              <  2:3405613/128‑1 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTa                                                                                              >  1:3154017/1‑128 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAattttaatttta                                                                                              >  2:358808/1‑128 (MQ=255)
                                     tattaataaAATAAAACTATTATCTTTTTATTTA‑TTTTTTTTATA‑TTATAATTTTTAAAAAATTAATTTT‑AAATTTTTAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAgg                                                                                            <  1:98467/125‑1 (MQ=255)
                                      attaataaAATAAAAATATTATATTTTTTTTTT‑TTTTTTTTTTA‑TTAAAATTTTTAAAAAATTAATTTT‑AAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTT‑‑TAATGGAAATATAAATTTTAGGTa                                                                                          <  1:1829861/126‑1 (MQ=255)
                                      aGTAATAAAAAAAAAATAATTTATTTTTTGATA‑TTTTTTGGATA‑TGCAAATTTTTAAAAATATAATTTT‑AACTTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                           <  2:787451/128‑1 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATATTGTAAATATAAATTTTATGt                                                                                           >  2:3040029/1‑128 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTAt                                                                                         >  2:3787096/1‑128 (MQ=255)
                                       tttataaaataaaaataTTATCTTTTTTTTTT‑TTTTTTGTTTATTGAAAATTTTTAAA‑AAATAATTTT‑AAATTTTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                          <  2:1050764/123‑1 (MQ=255)
                                        tAACAAACTAAAAATTTTTTTTTTTTTTTTA‑TTTTTTGTATA‑TGCAAAATTTTTAAAAATTAATTTGTAAATTTTAAAAAAATG‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  2:2187099/128‑1 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAATAATAAATTTTattttttttttt                                                                                   >  1:2149664/1‑117 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATGTAAAATTAAATTTTTGtttttttttt                                                                                   >  2:2878321/1‑128 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTGAATTATAAATTTTAGTTATTtttttg                                                                                  >  1:3435275/1‑128 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATAAAATTTTTAGGTATTtttttg                                                                                  >  1:1131582/1‑128 (MQ=255)
                                                taaaaataTTATTATTTTTTATT‑TTTTTTTTTAA‑TTGAAATTTTTAAAAAAATAATTTT‑TAAATTTAAAAAA‑ATTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTtgttgt                                                                                 <  2:147343/128‑1 (MQ=255)
                                                 aaaactttttagttttttTATA‑TTTTTTTTTTA‑TTAAAATTTTTTAAAAATTAATTTG‑CACTTTTAAAAAATATGTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTtgttgt                                                                                 <  2:3685473/116‑1 (MQ=255)
                                                  aaactaTTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTttgttttta                                                                               >  1:3318012/1‑124 (MQ=255)
                                                  aaaattttatTTTTTTTTTTA‑TTTTTTGTTTT‑TTTAAATTTTTAAAAAATTAATTTT‑AAATTTTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                               <  1:10008/122‑1 (MQ=255)
                                                     ctaTTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAAAATAAAAATTTTAGTTATTTTTTTTTATaat                                                                            >  2:273134/1‑127 (MQ=255)
                                                      tattatTTTTTTATTTATTTTTTTTTTTA‑TGAAATTTTTAAAAAAATT‑ATTTG‑TAAATTTAAAAAAAATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAg                                                                            <  1:3495759/128‑1 (MQ=255)
                                                      tattatCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTTTTGTCTAAGt                                                                           >  1:417203/1‑128 (MQ=255)
                                                        ttatTTTTTTTTATA‑TTTTTTTTTAT‑TTCAAATTTTTAAAAAATTAATTTT‑AAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                         <  1:125665/128‑1 (MQ=255)
                                                        ttatCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTTTAAATAAAAATTTTATTTTTTTTGTTGTATaattt                                                                          >  2:3451606/1‑125 (MQ=255)
                                                        ttatATTTTTATATA‑TTTTTTTTATA‑TTCAAATTTTTAAAAAATTAATTTT‑TAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                        <  1:827123/128‑1 (MQ=255)
                                                         tatCTTTTTAGATA‑‑TTTTTGTATA‑TTCAAATTTTTTAAAAATTTATTTT‑AACATTTTAAAAATAGCATTTTTTTTTTTTTTTTTTTTATTGTAATTTTAATTTTTA‑GTATtttttttttttattttat                                                                       >  2:3335332/1‑116 (MQ=255)
                                                           tCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAAAATAAAAATTTTTGTTTTTTttttgtgaaataatata                                                                      >  2:3171610/1‑117 (MQ=255)
                                                                    tta‑tTTTTTGTATT‑TTTAAATTTTTTAAAAATTTATTTT‑AACTTTTAAAAAATTGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                             <  2:407913/127‑1 (MQ=255)
                                                                     attttttttttATA‑TTTAAATTTTTAAAAAATTTATTTT‑TAATTTTAAAAAAT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                            <  2:2821469/125‑1 (MQ=255)
                                                                     aa‑tTTTTTTTATA‑TTCAATTTTTTAAATAATTAATTTT‑AACTATTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                            <  1:788710/127‑1 (MQ=255)
                                                                         tttttGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTAATGTAAATATAAATTTTAGGTATTTTTTTGTATATTTATATAAAAAAATATaaa                                                          >  1:3858120/1‑128 (MQ=255)
                                                                            ttGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTTTAAAATTATATAAAAAATATGAAAGGaa                                                      >  2:3273053/1‑128 (MQ=255)
                                                                             tGTATA‑TGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATATTGAAAAAATAAATTTTATTTATTTTTTTTTTTAATTTaataaaaaaataaaaattaaa                                                     >  2:861427/1‑123 (MQ=255)
                                                                               ttattttttaaTTTTTAAAAAATTTATTTT‑TAATTTTTAAAAATAG‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaaa                                                    <  2:3493718/119‑1 (MQ=255)
                                                                                    tGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTTTTTTTTTGTATAATTTTATAAAAAAATATAAAGTAAAAAata                                                >  2:1999816/1‑128 (MQ=255)
                                                                                    tGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAATAATTAAAATAAAAATTTTTGTTATTTTTTTTTATAATTATAAAAAAAATTAAAAAGTAAAAtata                                                >  1:1669927/1‑128 (MQ=255)
                                                                                    tGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTATATATAAATTTTATTAATTTTTTTTTATATTTATATAAAAAAATAAAAATAAAAAAatat                                               >  1:30183/1‑128 (MQ=255)
                                                                                    tGCAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTATATTTAAATTTTTTGTATTTTTTTGTATAAGTAGAAAAAAAAATATAAATGataaattttt                                              >  2:1692106/1‑123 (MQ=255)
                                                                                      cAAATTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATGTATTTTTTTGTATAATTTTATAAAAAAATAAAAATAAAAATATAtt                                              >  1:481299/1‑128 (MQ=255)
                                                                                       aaaTTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAAAAAATATTGt                                            >  1:1344523/1‑128 (MQ=255)
                                                                                             ttaaaaaaTTAATTTT‑TAATTTTAAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAg                                      <  2:2075855/126‑1 (MQ=255)
                                                                                                 aaaattaattTT‑AAATTTTAAAAATT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑a                                <  2:2142398/126‑1 (MQ=255)
                                                                                                  aaattaattTT‑TAATTTTAAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑a                                <  2:3101589/127‑1 (MQ=255)
                                                                                                  aaattaattTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTTTATAAGTATCTAAAAAAATAGAAAGGAAAAATTATTTTTAAAATTAAT‑a                                >  1:1437245/2‑128 (MQ=255)
                                                                                                    attaattTT‑ATATTTTAAAATATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAaataattt                                <  1:310429/128‑3 (MQ=255)
                                                                                                    attaattTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGTAATTATAAATTTTATTTATTTTTTTTTATATTTATATAAAAAAATATAAATTAAAAAATATTTTTaaaataaaaaa                                >  1:1603922/1‑121 (MQ=255)
                                                                                                     ttaattTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTATT‑TAATGTAAATATAAATTTTAGTTTTTTTTTTGAATATTTTAAAAAAAAAATAAAATCGAAAAAATATTTATaaaataaaaagaa                              >  2:629424/1‑119 (MQ=255)
                                                                                                     ttaattTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTTTTGTATAATTTTATAAAAAAATATAAAGGAAAAAATATTTTTAAAAGTAat‑aata                             >  1:2689035/1‑128 (MQ=255)
                                                                                                     ttaattTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTTTTTTGTTGTATAAGTTTCTAAAAAAATTGAATAGAAAAAATATTTTTAAAAGTAat‑aata                             >  1:1755748/1‑128 (MQ=255)
                                                                                                     ttaattTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTGTAAATATAAATTTTTGTTATTTTTTTTTATATTTTTAAAAAAAATTTAAAAGTAAAAAATTTTTTTAAAATTATT‑ATTaa                            >  1:3693629/1‑128 (MQ=255)
                                                                                                     ttaattTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTT‑TTTTATAAGTATATAAAAAAATAGAAAGAAAAAAATATTTTTAATATTAAA‑AATaaa                           >  1:2304552/1‑128 (MQ=255)
                                                                                                        attTT‑AACTTTTTAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTaaaa                          <  2:3726617/128‑1 (MQ=255)
                                                                                                            g‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTTGTTATTTTGTTGTATATTTTTATAAAAAAATAGAAATGAAAAAATATTTTAAAAATAAAT‑ACTAAAattat                      >  1:1207749/1‑128 (MQ=255)
                                                                                                              aaattttAAAAAATATCTTTTTTTTTTTTTTTTTATATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAattat                      <  1:2035865/122‑1 (MQ=255)
                                                                                                               aCTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATGGTATTTATAAATTTTTTGTTTTTTTTTGTAATATTTTTTAAAAAAATAGAATGGAAAAAATATTTTTAAAAATATA‑ATAAAAattatt                     >  1:3387739/1‑128 (MQ=255)
                                                                                                                cTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTGAAAAAAAAATTTTAGGTATTTTTTTTTATATTTATATAAAAAAATAAAAAGGAATAAATATTTTTAAAATTAAT‑TATAAAATTATTTa                   >  1:2742398/1‑128 (MQ=255)
                                                                                                                  tGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAATAATTTTAGGTATTTTTTTTTCTAATTATATAAAAAATTTTAAAGTATAAAATATTTTTAAAATATAT‑AATAAAATTATTTAAtt                >  1:3798860/1‑127 (MQ=255)
                                                                                                                   gTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTAGTTTTTTTTTTTTATAATTATATAAAAAAATAAAAATTAAAAAATTTTTTTAAAATTAAT‑AAAAAAATTATTTattt                >  2:2377181/1‑125 (MQ=255)
                                                                                                                   gTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATATAAAGGAAAAAATATTTTTAAAAGTAAT‑AATAAAATTATTTAAtttt              >  1:642846/1‑128 (MQ=255)
                                                                                                                     taaatatttttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGt               <  1:1499924/118‑1 (MQ=255)
                                                                                                                          aattttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGttaatt          <  2:160856/123‑1 (MQ=255)
                                                                                                                          aaatagctttttttttttttttttATAAAGGAAAAATAAATTTTTGTTATTTTTTTGGATAATTATCTAAAAAAATAAAAAGAAAAAAATTATTTTAAAATAAAA‑AATAAAATTATTTATTTttaata          >  2:897571/8‑127 (MQ=255)
                                                                                                                          aTAGCTTTTTTTTTTTTTTTTTTTAAAATGAAAATAAAAAATTTATGAATTTTTTTATAATAATAAATAAAAAAATAAAAAGAAAAAAAAATTTTAAAAAAAAAA‑AAAAAAAATAATTAATTttaata          >  2:1820573/1‑127 (MQ=255)
                                                                                                                           tttttttttttttttttttttttATAATGGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGttaatta         <  2:47035/124‑1 (MQ=255)
                                                                                                                           attttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGttaatta         <  2:951426/124‑1 (MQ=255)
                                                                                                                           aaatatcttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGttaatta         <  2:1118266/121‑1 (MQ=255)
                                                                                                                            tagcttttttttttttttttttATATTGGAAATTTAATTTTTTTTTATTTTTTTGTAAATTTATATAAAAAATTATAATGTAAAAAATATTTTTAAAATTATT‑ATTAAAAATAATAAATTttaataaa        >  1:910729/5‑128 (MQ=255)
                                                                                                                            atagctttttttttttttttttATAATGTAAATATAAATTTTTTGTATTTTTTTTTGAAAGAAAATAAAAAAAAAAAAATTAAAAAATATTGTTAAAATATAA‑AATAAAATAATTTAAAGttaaataa        >  2:2491018/6‑128 (MQ=255)
                                                                                                                             tagctttttttttttttttttATAATGGAAATAAAAATTTTAGGTATTTTGTTGTAAAATTAACTAAAAAAAAAGAATGTAAAAAATTTTTTTAAAAATATC‑AAAAAAATAATTTATTTTTAATTaaa       >  2:708410/5‑128 (MQ=255)
                                                                                                                              gcttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTATAAGTATCTAAAAAAATAGAAAGGAAAAAATTTTTTTAAAATTAAT‑ACTAAAATTATTTAATTTTAATTaaaa      >  1:2362143/3‑128 (MQ=255)
                                                                                                                                ttttttttttttttttttAAAATTGAAATATAAATTTTAGGAATTTTGTTGTGTAATAATAAAAAAAAATAAAAATAAAAAAAAATTG‑TAAAAATATTAAATAAAATTTTTTATATTTAATTaaaaat    >  2:1263507/1‑126 (MQ=255)
                                                                                                                                  ttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTGTATAAGTATATAAAAAAATATAAATTAAAAAATATTTTTAAAATTAAT‑AATAAAATTATTTAATTTTAATTAAAAATta  >  1:534492/1‑128 (MQ=255)
                                                                                                                                  |                                                                                                                                
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATA‑TGCAAATTTTAAAAGAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAT‑ACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.