Predicted mutation
evidence seq id position mutation annotation gene description
JC CP016816 311,173 Δ4 bp intergenic (‑96/‑215) JCVSYN2_01300 ← / → JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =245 (0.140)903 (0.610) 188/208 1.6 81.5% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 208 (0.140)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

Only 100 of 1408 total aligned reads displayed.

CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311026‑311280
                                                                                                                               |                                                                                                                               
gtaccagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatt                                                                                                                                 <  2:2327026‑M1/1‑1 (MQ=255)
gtaccagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacaatcatt                                                                                                                                 <  2:109149‑M1/1‑1 (MQ=255)
       ttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatata                                                                                                                          <  2:3280430‑M1/8‑1 (MQ=255)
       ttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatata                                                                                                                          <  1:1614942‑M1/8‑1 (MQ=255)
        tgtaataactaatccaaatgaacttaaaattgttaataacattttcattttacacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatat                                                                                                                         >  2:350890‑M1/120‑128 (MQ=255)
        tgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatat                                                                                                                         <  2:1853323‑M1/9‑1 (MQ=255)
        tgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatat                                                                                                                         <  1:378865‑M1/9‑1 (MQ=255)
          taataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatat                                                                                                                       >  1:549929‑M1/118‑128 (MQ=255)
          taataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatat                                                                                                                       >  1:2174128‑M1/118‑128 (MQ=255)
            ataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatat                                                                                                                     <  2:3835298‑M1/13‑1 (MQ=255)
            ataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatat                                                                                                                     <  1:450572‑M1/13‑1 (MQ=255)
              aaTCAAAAACAACATAAAATTTTAATAAACTTTATAATTATACACACCCATTATAAAAAAATAAAATACTTGATAAATAAGAATAAAAACATATAAAACATACACTCAatatatatatatatatatat                                                                                                                   <  1:3243822/128‑1 (MQ=255)
               actaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatata                                                                                                                  <  2:2991142‑M1/16‑1 (MQ=255)
                 taatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgatacatacgattcaaaacatatattacatacattcattatatatatatataaata                                                                                                                <  1:940237‑M1/18‑1 (MQ=255)
                  cAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatat                                                                                                               >  1:1080054/1‑128 (MQ=255)
                    tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacgttcattatatatatatatatatatat                                                                                                             >  2:3201765‑M1/108‑128 (MQ=255)
                    tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                             <  2:2270935‑M1/21‑1 (MQ=255)
                       taaCTTAAAATTTTAATTAAATTTTTCATTTTAAACACCCCTTATTTAATAATAAAATAATTTTTAAATAATATTCAAAACATATATAACTTACATTATTtatatatatatatatatatataatgcaa                                                                                                          <  2:397084/127‑7 (MQ=255)
                         atgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATAtataaata                                                                                                        <  1:2851680‑M1/26‑4 (MQ=255)
                         aCTTAAAATTTTAATTAACTTTTTCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatataatgcaa                                                                                                        <  2:3786644/128‑7 (MQ=255)
                          tgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCa                                                                                                       <  1:2059420‑M1/27‑1 (MQ=255)
                          ataaattataattttaattatatttttaattttaaacacccattattaaaaaataaaataattgttaaataagattcaaaaaatatataacatacattcatTATATATATATATATATATATAATGCa                                                                                                       >  2:2844319‑M1/102‑128 (MQ=255)
                           taacttaaaattgtaattaactttttaattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCaa                                                                                                      >  2:2397810‑M1/101‑128 (MQ=255)
                             acttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatataaaacatacattcatTATATATATATATAtatatataaaaataaa                                                                                                    <  1:2594064‑M1/30‑8 (MQ=255)
                               ttaaaattgtatttaaatttttaattttacaaccaccttattaaaaaataaaatatttgttacatacgatttaaaacatatataaaatacattcatTATATATATATATATATATATAATGCAATATg                                                                                                  >  2:1232614‑M1/97‑128 (MQ=255)
                               ttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATg                                                                                                  <  2:1926479‑M1/32‑1 (MQ=255)
                               ttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATg                                                                                                  >  1:2990185‑M1/97‑128 (MQ=255)
                               ttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATg                                                                                                  <  1:3736773‑M1/32‑1 (MQ=255)
                               aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTa                                                                                                >  2:3137281/1‑128 (MQ=255)
                                 aaaattgtaattaaatttttcattttaaacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTa                                                                                                >  2:3365358‑M1/95‑128 (MQ=255)
                                  tttatttatatttatCATTTTAAAAAAACATTATTAAAATATAAAATACTTGTTATATAATATTCAAAACATATATAACATAAATTCTT‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGa                                                                                           <  1:310530/118‑1 (MQ=255)
                                  aaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTaa                                                                                               >  1:1885806‑M1/94‑128 (MQ=255)
                                   tttatttaattttttttttTATACACACCTTATTAAAAAATAAAATAATTGTTACATAATATTAAAAAAATATATATAATAAATTCTT‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                          <  2:924244/119‑1 (MQ=255)
                                   catcagatattttttATTTTAAACAAACCTTATTAAAAAATAAAATAATTGTTACATACTATTCAAAACATATATAAAATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATg                                                                                            <  2:2031733/119‑1 (MQ=255)
                                    tAATTAACTTTTTAATTTTACACAACAATTATTAAAAAATAAAATACATGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGa                                                                                           <  1:1495343/128‑1 (MQ=255)
                                     ttgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATAtaatgaaatatttataat                                                                                            <  1:3591435‑M1/38‑8 (MQ=255)
                                     ttgtaattaaatttttaattttacacaccccttattaaaaaataaaatacttgttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATg                                                                                            >  1:113944‑M1/91‑128 (MQ=255)
                                             aactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATg                                                                                    <  1:1986422‑M1/46‑1 (MQ=255)
                                             aactttttcattttacacacaccttattaaaaaataaaataatttttacatactattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATg                                                                                    >  2:3095220‑M1/83‑128 (MQ=255)
                                               actttttcattttacacacacatattaaaaaataaaatacttgttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGt                                                                                  >  1:167273‑M1/81‑128 (MQ=255)
                                                tttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATTTAAATGAAAAtatgtta                                                                                 <  1:2920782‑M1/49‑4 (MQ=255)
                                                tttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATGTAAATGAAAATatggaa                                                                                 <  1:2295298‑M1/49‑3 (MQ=255)
                                                 ttttcatattacacacacattattaaaaaataaaatacttgttacatactattcaaaacatatataaaatagattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtat                                                                                >  1:3181415‑M1/79‑128 (MQ=255)
                                                  tttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtata                                                                               <  2:1396739‑M1/51‑1 (MQ=255)
                                                  aTTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataat                                                                             >  2:36388/1‑128 (MQ=255)
                                                  aTTTTACAAAGCATTTATTTAAAAATAAAATATTTGTTACATAATATTCAAAAAATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAATTATGGTataat                                                                             <  2:2788470/128‑1 (MQ=255)
                                                   ttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATTTTataa                                                                              <  1:1002425‑M1/52‑1 (MQ=255)
                                                   ttcattttacacaccccttattaaaaaataaaatacttgttacataagactcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTataata                                                                            >  1:806605‑M1/77‑128 (MQ=255)
                                                   ttcaatttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataa                                                                              >  2:762405‑M1/77‑128 (MQ=255)
                                                      tttttacacacatattattaaaaaatataatattttttatataagattcaaaaaatatataaaatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAg                                                                           >  2:2657476‑M1/74‑128 (MQ=255)
                                                       acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATTCAATATGTATATTAAAATATGGTATAATAGc                                                                          >  2:46559/1‑128 (MQ=255)
                                                       acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGTTATAATAGaaa                                                                        >  2:2932602/1‑128 (MQ=255)
                                                          tacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATAAAATGCAATATGTAAATGAAAATATGGTATAATAGCAAc                                                                       <  1:3495429‑M1/59‑1 (MQ=255)
                                                          caccacTTATTAAAAAATATAATAATTGTTACATACTATTCAAAACATATATAATATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCg                                                                     <  2:1152652/128‑1 (MQ=255)
                                                            cacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATTTAAATAAAAATATGATATAATAGCaacat                                                                     <  2:3697711‑M1/61‑3 (MQ=255)
                                                                caacttattaaaaattaaaataatttttacataatattcaaaacatatataaaataaattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCATCCGTTta                                                                 >  1:1366240‑M1/64‑128 (MQ=255)
                                                                 cccttattaaaaaataaaatacttcttacatacgattcaaaacatatataacatacattcatTATATATATATAAATATTTATAATCCAATATGTAAAtgaaaatattgtataatatcacacatatat                                                                <  2:2177443‑M1/66‑13 (MQ=255)
                                                                      aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATTAAATATTTAAATTAAAATATTATAAAATATCAACATTATATAAAATaa                                                         >  2:1549614/1‑128 (MQ=255)
                                                                       ttaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTATtataaatta                                                          <  1:767308‑M1/72‑4 (MQ=255)
                                                                       aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATAAATATATAAAAATCAATATGTAAATTAAAAAATTTAATAATAGCAACAGTTTATAAAGTa                                                          >  2:1457926/1‑128 (MQ=255)
                                                                         atataataaaataattgtttgatacgtttcaaaacatatataacatacattcatTTTATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                        >  2:2079870‑M1/55‑128 (MQ=255)
                                                                         aaataataaaataatagtttaataagattcaataaatatatatcttatattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                        >  2:661447‑M1/55‑128 (MQ=255)
                                                                             atatagatGTTAGATAATATTCAAAAGATATATAACATAGATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                                  <  2:2125111/121‑1 (MQ=255)
                                                                             aataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                                    <  1:1310255‑M1/78‑1 (MQ=255)
                                                                                aaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAg                                                 <  1:3034486‑M1/81‑1 (MQ=255)
                                                                                aaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAg                                                 <  2:556764‑M1/81‑1 (MQ=255)
                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATAAATATATAAATAAATAATTAAATGAAAAAATATTATAATATAAACCGTTTATAAATTATAAATATAGTaaa                                             >  2:2488449/1‑128 (MQ=255)
                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                             >  1:1775652/1‑128 (MQ=255)
                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTAATTATATATATATATATATATATAAAAA‑‑‑AATATGTAAATAAAAATATAATATAATATAAACATTTTAAAAAGTAAAAAAAAACTaaaaa                                           >  1:1220542/1‑126 (MQ=255)
                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  1:36388/128‑1 (MQ=255)
                                                                                     aattgttacattagattcaaaagatatataacataatttaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                            >  1:2524031‑M1/43‑128 (MQ=255)
                                                                                       ttgttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                          >  1:2116872‑M1/41‑128 (MQ=255)
                                                                                       ttgttaaatactattaaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAaataa                                          >  2:1722650‑M1/41‑127 (MQ=255)
                                                                                       tACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATAAATA‑‑‑‑AATATATAAATAAAAATATTGTATAATATAAAAATTTTATAAAAAAAAAAAATATTAAAtataaaa                                      >  1:683876/1‑125 (MQ=255)
                                                                                        tgttacataagattcaaaacatatataacatacattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                         >  2:1798076‑M1/40‑128 (MQ=255)
                                                                                         gttacatactattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtacta                                      >  1:2376371‑M1/39‑128 (MQ=255)
                                                                                             catacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                                  >  2:1293245‑M1/35‑128 (MQ=255)
                                                                                             cGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATTGTATAATATCAACCTTTTATAAAGTAAAAAAAAAGTAAATATACTAATTa                                  >  1:1558528/1‑128 (MQ=255)
                                                                                              atactattcaaaacatatataacatacaatcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACtt                                   >  1:2764928‑M1/34‑128 (MQ=255)
                                                                                                ttCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCTATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                               >  2:2704961/1‑128 (MQ=255)
                                                                                                    aaaCATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTAATTTACta                           >  1:1847309/1‑128 (MQ=255)
                                                                                                     tcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATAGTAAATATAATAATTATTTACt                            <  1:31359‑M1/102‑1 (MQ=255)
                                                                                                     tcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATGTAAATGAAAATATTGTATAATAACAACCGTTTATAAATAAAAAAAATATAAAATAAaatacatatataat                            <  2:2575144‑M1/102‑6 (MQ=255)
                                                                                                       aaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                          <  2:3462894‑M1/104‑1 (MQ=255)
                                                                                                       aaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                          <  2:100849‑M1/104‑1 (MQ=255)
                                                                                                        aaaaaaatataacaaaaattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                         >  1:343742‑M1/24‑128 (MQ=255)
                                                                                                          atataACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATTAAAATATGTTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTTCTTATTTACTAATaaaa                     >  1:614708/1‑128 (MQ=255)
                                                                                                          acatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAATATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaaa                     <  2:3577270‑M1/107‑1 (MQ=255)
                                                                                                           catatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                      <  1:87908‑M1/108‑1 (MQ=255)
                                                                                                            atatataacatacattcatTATATATATATATATATATATAAAGCAATATGTAAATGAAAATAAGGTATAATAGCACAAGATTATATAGTAAAAAAATAGTAAATATACAAATTATTTACTAATaaaa                     <  1:3375283‑M1/109‑1 (MQ=255)
                                                                                                              atataacatacattcatTATATATATATATATATATATAAAGCAATATGTAAATGAAAATATTGTATAATATCAACCTTTTATAAATAATAAAAATAGTAAATATACAACTTATATACTAATAAAATc                   <  1:1266347‑M1/111‑1 (MQ=255)
                                                                                                               taaaaaataaattATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                  <  2:835094/118‑1 (MQ=255)
                                                                                                                 atacatTCATTATATATATATATATATATATAAATA‑‑‑‑AATATGTAAATGAAAATATGATATAATATAAACATTATATAAAGTAAAAAAATATTAAATATAATAATTATTTAATAATAAAATATAttttt            >  1:267984/1‑128 (MQ=255)
                                                                                                                   acatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATTTTATAATAGAAACCGTTAATAAACTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt              <  2:1655380‑M1/116‑1 (MQ=255)
                                                                                                                   acatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt              <  1:3297103‑M1/116‑1 (MQ=255)
                                                                                                                   acatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt            <  2:1594437‑M1/116‑1 (MQ=255)
                                                                                                                    cataaattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtttt             >  1:1430187‑M1/12‑128 (MQ=255)
                                                                                                                      tacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAAAAGTAAATATACTACTTATTTACTAATAAAATCTATTttta           <  1:173464‑M1/119‑1 (MQ=255)
                                                                                                                        aattattTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttatt         <  2:710125/127‑1 (MQ=255)
                                                                                                                          ttcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattta       >  1:3843841‑M1/6‑128 (MQ=255)
                                                                                                                               |                                                                                                                               
CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311026‑311280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.