New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =1841 (0.560)122 (0.050) 76/202 37.1 7.9% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 1370 (0.510)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1959 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012
                                                                                                                                     |                                                                                                                                 
cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATAAAAGAAAAAAACTCCATATTACATATAGATTTAAT‑‑G‑‑‑‑atata                                                                                                                                   >  2:6889221/1‑128 (MQ=255)
   aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatat                                                                                                                                >  2:5618284/1‑128 (MQ=255)
   aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatat                                                                                                                                >  2:3231882/1‑128 (MQ=255)
    tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                               >  2:890178/1‑128 (MQ=255)
    tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                               >  2:6160531/1‑128 (MQ=255)
       ttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatat                                                                                                                            <  1:5258600/128‑1 (MQ=255)
             ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatat                                                                                                                      >  2:2192177/1‑128 (MQ=255)
              tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                                     <  1:2575850/128‑1 (MQ=255)
               ttAAGTTTCATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                    <  1:3222442/127‑1 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                    >  2:5716515/1‑128 (MQ=255)
                 aaGTTTCATTTTTAATAAATATTAGTAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                                  <  1:2826747/128‑1 (MQ=255)
                 aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                                  >  2:3378667/1‑128 (MQ=255)
                  attttCTTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATTAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                                 <  2:1727972/126‑1 (MQ=255)
                   gTTTCATTTTTAATAAATATTAGAAATATAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                                <  2:740106/128‑1 (MQ=255)
                   gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                                <  2:3751917/128‑1 (MQ=255)
                   gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatataaatatatataa                                                                                                                >  2:6426806/1‑127 (MQ=255)
                    tttAATTTTTAATAAATATTATATATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatata                                                                                                               <  1:4822050/128‑1 (MQ=255)
                     ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                              >  1:6622919/1‑128 (MQ=255)
                       cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                            >  2:2458855/1‑128 (MQ=255)
                       aaTTTTTAATAAATAATATAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATCAATCAAATAAAAAAACTCCATATTAACTATAGAGTAAAA‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                            <  1:1964787/127‑1 (MQ=255)
                        aTTTTTATTAAATATTATAAATTAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAATAAAAAACCTCAATATTATATATAGAGTTATT‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑g                                                                                                         <  1:4078372/128‑1 (MQ=255)
                        aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑g                                                                                                         >  2:4192028/1‑128 (MQ=255)
                           tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCaa                                                                                                      >  1:1570831/1‑128 (MQ=255)
                             taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGc                                                                                                    >  2:6534281/1‑128 (MQ=255)
                             taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAAAATCCATATTACATATAGATATAAT‑‑G‑‑‑‑atatatatatatatatatatatatatataaaaaa                                                                                                      >  2:2081512/1‑122 (MQ=255)
                              aataaataTTAGAAATAAAAATTGAATATTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatataaatatatatatatatataaaaataaa                                                                                                     >  1:2991693/1‑120 (MQ=255)
                                  tatatTAGATATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGACGCAAATCAAAAACCACTATATTACCTATAGAGTTTTT‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGAt                                                                                                 <  2:7057285/127‑1 (MQ=255)
                                  aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCa                                                                                               <  1:174662/128‑1 (MQ=255)
                                  aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATA‑A‑‑‑GCAATCGATCAGc                                                                                             >  1:3814404/1‑128 (MQ=255)
                                   atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GAAATCGATCat                                                                                              >  1:5862443/1‑127 (MQ=255)
                                     atTAGAAATAAATATTGTATTTTTAATAAAAATATATTAGGAAATTTAGCAAAGCAAAAACCTCCATATTTACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCa                                                                                            <  1:6825073/128‑1 (MQ=255)
                                       tAGATATAAAAATATTATTTTAAAAATATATATTTTAGTTAATTAATAAAATAAAAAAACTCTATATAAACTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATa                                                                                          <  2:5073060/128‑1 (MQ=255)
                                        aGAAATAAATATTCTATTTTTAAAATATATATTTTATGATATGAATAAAATCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                         <  2:4827257/128‑1 (MQ=255)
                                             tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑TCAAGCGATAAGAATaaatt                                                                                      >  1:7071084/1‑126 (MQ=255)
                                             tAAAAAATTTATTTTTAAAAAATATATTTTTTTATATGAATAAAATATAAAAAAAAAATATTAACTATATAGATATT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GTAAGCGATCAGCATAAAATgg                                                                                    <  2:452117/128‑1 (MQ=255)
                                              aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaaa                                                                                        <  1:6163859/119‑1 (MQ=255)
                                               aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TAAATCTATCAGCATAAAAttttt                                                                                  >  1:1856556/1‑124 (MQ=255)
                                               aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAA‑‑GCAAGCTATCACCATAAAATTGtt                                                                                  >  1:6380666/1‑127 (MQ=255)
                                                 tattttattttTAATATAAATATTTTATTATATTAATAATATAAAAAATCTCTATATTATATATAGATTTTATTAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg                                                                                  <  1:5625513/127‑1 (MQ=255)
                                                 aaTTTTATTTTTAAAATATATATTTTATTAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:715403/128‑1 (MQ=255)
                                                 aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  1:2102184/128‑1 (MQ=255)
                                                   ttGTTTTTTTAAAATAAATATTTTTGGAAATTAAGAAAAGAAAAAAACTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:3656125/128‑1 (MQ=255)
                                                    tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAATTTTAGa                                                                         >  1:4391103/1‑128 (MQ=255)
                                                     gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCTATCATCATAAAATGGTTAAATTTat                                                                          >  2:4627238/1‑127 (MQ=255)
                                                       aTTTTTAAAATAAATATTTTAGGTGATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                          <  2:1589702/128‑1 (MQ=255)
                                                       aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAAAATAAAATGGAGAAATTTAg                                                                          >  1:6046891/1‑128 (MQ=255)
                                                       aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATAGATATATAT‑‑TCAAGAGATCAGAAGAAAATGGTGAAATTTat                                                                          >  2:2295268/1‑127 (MQ=255)
                                                          tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATTTATATATATATATATATAT‑‑GCAAGCGATCAGCTTAAAATGGTGATATTTAGATc                                                                       >  1:4513883/1‑128 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑TAAAGCTATCAAAATAATATGGTGAAAATTAGAta                                                                       >  1:1007781/1‑127 (MQ=255)
                                                             aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCAAGCTATCAGAATAAAATGGTGAAATTTAGATCTGa                                                                    >  1:6942878/1‑128 (MQ=255)
                                                              aaataaatATATTATGAAATGAATCAAAGAAAAAACATCCAAATAATCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                     <  2:4957260/128‑1 (MQ=255)
                                                                atatatatTTTATTAAATTAATAAAATAAAAAAAATATATATAAAATATAGAGTTAATTAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:27353/128‑1 (MQ=255)
                                                                 tatatatTTTATTAAATGAATAAAAGATAAAAAATCAATATTACATATATAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                                <  1:2655062/125‑1 (MQ=255)
                                                                  aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCAAGCGATCAGAATAAAATGGTGATATTTATATCTGAGTTgg                                                               >  1:3723078/1‑128 (MQ=255)
                                                                      atTTTAGTAAATGAAGCAAAGCAAAAAACTCCATATTAACTATAGAGTTATT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  2:1245298/128‑1 (MQ=255)
                                                                      atTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑CAAGATCTCAGAATAATATGGAGAAATTTAGATCTGattatgtattat                                                         >  2:3537413/1‑117 (MQ=255)
                                                                        tttAGGAAATGAAGCAAAGCAAAACCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GTAAGAGATCAGCATAAAATGGTGAAATATAGATCTGAGATGGTCTTAAAttt                                                     >  2:2548686/1‑128 (MQ=255)
                                                                        tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCATCATAAAATTGTGATATTTATATCTGAGTTGGTCTTaa                                                         >  2:5494438/1‑128 (MQ=255)
                                                                          tAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCAATCTATCAGAATAAAATGGTTAAATTTATATCTGAGTTGGTATTAAAt                                                       >  1:2270564/1‑128 (MQ=255)
                                                                             gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGATTTGGTCTTAAATTTg                                                    >  2:1841838/1‑128 (MQ=255)
                                                                              aaaTGAAGAAAATAAAAAAAATCAATATTACATATATAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  1:7208826/128‑1 (MQ=255)
                                                                                  gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAA‑‑TAAAGATCTCAGAATAAAATTGATATATATATATCTGATTTTGTATTAAAtatatattt                                               >  2:429874/1‑120 (MQ=255)
                                                                                    agcaaagcaaAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAA‑‑GCAAGCGATCACAATAAAATTGTTAAATATAGATCAGATTTGGTCTTAAATTTTTAGtttt                                             >  1:4958072/1‑128 (MQ=255)
                                                                                     gcaaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTGAATTTTGTAGttttt                                            >  2:1125072/1‑128 (MQ=255)
                                                                                     gcaaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAGATTTGTAGttttt                                            >  2:6298771/1‑128 (MQ=255)
                                                                                     gcaaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttttt                                            <  1:3101829/128‑1 (MQ=255)
                                                                                       aaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                        >  1:5113116/1‑128 (MQ=255)
                                                                                        aagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATAAGCAAGAGATAATAATAAAATTGTGAAATATAGATCTGATTTTGACATAAATATGTAGTTttta                                           >  2:2939284/1‑128 (MQ=255)
                                                                                         agcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGATTTTGTCTTAAATTTGTAGTTTTTATTTATAg                                    >  2:1030566/1‑128 (MQ=255)
                                                                                         agcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                    >  2:5343685/1‑128 (MQ=255)
                                                                                          tgaaaaaaCTCAATATTAACTATATAGTTATT‑‑T‑‑‑‑TTATATATATATATATATATATATATAT‑‑GAAAGCGATCAGCATAAAATGGTGAAATTTAGATGTGAGTTGGTCTTAAATTTGTAGTTtttattta                                       <  1:1251143/126‑1 (MQ=255)
                                                                                            aaaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCTAGCGATCAGCATAAAATTGTGATATTTAGATATGAGTTTGTATTAAATTTGTATTTTTTATTtata                                     >  2:6758240/1‑128 (MQ=255)
                                                                                             aaaaCCTCTATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                    <  1:4238484/128‑1 (MQ=255)
                                                                                              aaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtatatt                                   >  1:5727049/1‑126 (MQ=255)
                                                                                                aCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               >  2:4080339/1‑128 (MQ=255)
                                                                                                 ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCTAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                                >  2:1433879/1‑128 (MQ=255)
                                                                                                  ctagatatAACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               <  1:6486220/124‑1 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATAGTTAAATTTATATCAGAGATGGTCTTAAATTTGTAGTATTTATAtatattatat                               >  1:6713183/1‑128 (MQ=255)
                                                                                                  cTCAATATAAACTATATAGTTATT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               <  1:3510140/128‑1 (MQ=255)
                                                                                                    ccATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGTGTTGGTCTTATATTTGTAGTTTTTATTTAGTTTTTATaa                             >  1:2419192/1‑128 (MQ=255)
                                                                                                     cATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATAT‑‑GCAAGCGATCAACATAAAATGGTGAATTATATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATATATAttttt                                >  1:4654583/1‑127 (MQ=255)
                                                                                                       tatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCTATCAGCATAAAATGGTGATATATAGATCTGAGTTGGTCTTAATTTTGTTGTTTTTATTTATAGTTtatatatt                          >  2:523253/1‑124 (MQ=255)
                                                                                                       tatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAAAGGAGAAATATAGATCTGAGTTGGTCTTAAATTTCTAGTTTTTATTTATAGTTTATAAAGt                          >  2:6659220/1‑128 (MQ=255)
                                                                                                        atTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAA‑‑GCAAGCGATCATCATAATATTGATATATTTATCTCTGAGTTTGTATTAAATTTATAGTTTATATATATATTTtatatattt                         >  2:5855692/1‑123 (MQ=255)
                                                                                                        atTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAATTtaata                     >  1:6260768/1‑128 (MQ=255)
                                                                                                         ttACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        >  1:5540313/1‑128 (MQ=255)
                                                                                                         ttACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        >  2:1321926/1‑128 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCTAGCGATGAGCATAAAATGGTTAAATATAGATGTTAGTTTGTCTTATATTTTTAGTTTTTATTTATATTTtatatatttta                       >  1:1133273/1‑121 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTGAATTTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTttata                     >  2:2836600/1‑128 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                     <  2:443427/128‑1 (MQ=255)
                                                                                                            tcTATAGAGTTATT‑‑TAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       <  2:6030377/127‑1 (MQ=255)
                                                                                                                taGATTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg               <  1:1413388/128‑1 (MQ=255)
                                                                                                                  gagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTAGTTATAGTTTATAAAGTTTATAATTTAg               >  2:3908824/1‑128 (MQ=255)
                                                                                                                        gttaatgatatatatatatatatatatatatatatat‑‑TAAAGCTAACAAAATAATATTGTAATTTTTATATCTGTGTTGGTGTTATTTTTAGTGTTTTTATTTATATTTTATAAATTTTATTATTTAg               >  1:3352377/10‑128 (MQ=9)
                                                                                                                         t‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa        >  1:886266/1‑128 (MQ=255)
                                                                                                                            g‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAATATGGTGAAATTTAGATATGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa       >  2:3088578/1‑128 (MQ=255)
                                                                                                                            atgatatatatatatatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           <  1:2192177/123‑1 (MQ=255)
                                                                                                                             atatatatatatatatatatatatatatataa‑‑TAAATATATCAGAATAAAATGGAGATATATATATCTGAGTTTGTGTTATATTTTTATTTTTTATATATATTTTATAAATTTTATTATTTAtttttt          >  1:5403376/5‑128 (MQ=255)
                                                                                                                                 ttatatatataaataattatatatttat‑‑GCAAGCGATGAGCATAAAATGGTTATATTTAGATCTGAGTTGGTATTAAATTTGTAGATTTTATTTATAGTTAATAAAGTTAATAATTTAGATTTTTAat      <  1:3941211/127‑1 (MQ=255)
                                                                                                                                    tatatatatatatatatatatatat‑‑GCTAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAATTTTGTAGTTTTTATTTATTGTTTATATAGTTAATAATTTAGATTTTTTATAtt   >  2:1945041/1‑128 (MQ=255)
                                                                                                                                     |                                                                                                                                 
CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.