New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 87906 =2694 (0.810)431 (0.140) 155/226 17.9 15.4% intergenic (+33/‑827) JCVSYN2_00345/JCVSYN2_00350 hypothetical protein/50S ribosomal protein L31
?CP016816 = 87902 2284 (0.760)intergenic (+29/‑831) JCVSYN2_00345/JCVSYN2_00350 hypothetical protein/50S ribosomal protein L31
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2986 total aligned reads displayed.

TTGTGTAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTA  >  CP016816/87775‑88029
                                                                                                                                 |                                                                                                                                
 tttgtTACAAAATTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTATATTTTTAATAGCTGATTTAAATGGATTATTAAACAATCCA‑t                                                                                                                                <  2:2138851/126‑1 (MQ=255)
  gtgtAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tt                                                                                                                               >  1:1875426/1‑128 (MQ=255)
  gtgtAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tt                                                                                                                               >  1:4814886/1‑128 (MQ=255)
  gtggAACAAAAGTGGTTATTGATTTGCAATTAAATTTCAAATTGATAATAAAATTTTTAT‑TCATTGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tt                                                                                                                               <  1:3990390/128‑1 (MQ=255)
   tggtaCAAAAGTTGTTTTTGTTTTTCTAGTAAAGGTTAAATTGTTAATAAAATTGATTT‑TCATGGCAAGT‑CAAATGAATATTTAGATTTTTAATTGTTGATTTAAATGGATTATTAAACAATCCA‑ttt                                                                                                                              <  1:4378435/124‑1 (MQ=255)
       aCAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATTGATTATTAAACAATCAA‑ttttttt                                                                                                                          >  2:110228/1‑128 (MQ=255)
       aCAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAAAAATCCA‑ttttttt                                                                                                                          >  2:3903518/1‑128 (MQ=255)
        cAAAAGTGGTTATTGCGTTGCCAGTAAATGTCAAATTGATAAAAAACTTGATAT‑TCATGGTAAGT‑CAAATGAATATTTAGATTTTTAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttt                                                                                                                         <  2:3093406/128‑1 (MQ=255)
        cAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttt                                                                                                                         >  1:1696429/1‑128 (MQ=255)
         aaaaTTGGTTATTGATTTTCAATTAAATTTAAAATTTTTTATAAAATTGATAT‑TCATGGAAATT‑AAAATTAATTTTTAGATTTTGAATAGATGATTTAAATGGTTTATTAAAAAATCCA‑ttttttttt                                                                                                                        <  1:2889824/128‑1 (MQ=255)
            aGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttttttt                                                                                                                     >  2:5788436/1‑128 (MQ=255)
             gTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATTGATTATTAAACAATCAA‑ttttttttttttt                                                                                                                    >  2:1205800/1‑128 (MQ=255)
             gTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttttttttt                                                                                                                    >  1:7109180/1‑128 (MQ=255)
             gTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttttttttt                                                                                                                    <  2:2310622/128‑1 (MQ=255)
              tGGTTATTGAGTTGCAAGTTAAGTTAAAATTTATAAAAAAATTGATAA‑TCATTGAAACT‑CAAATGAATATTTAGATTTTTAAAAGCATATTTAAATGGATTATTAAACAATCCA‑tttttttttttttt                                                                                                                   <  2:1600009/128‑1 (MQ=255)
                 ttATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGCTTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttttttttttaat                                                                                                                >  1:5397724/1‑125 (MQ=255)
                 ttATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttttttttaaaa                                                                                                                >  1:3208863/1‑124 (MQ=255)
                 ttATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAAAAATCAA‑tttttttttttttaaat                                                                                                                >  1:7004183/1‑124 (MQ=255)
                 ttATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATATAGATTTTGAATATCTGATTTAAATGAATTATTAAACAATCAA‑ttttttttttttaaaat                                                                                                                >  2:1481657/1‑123 (MQ=255)
                  tATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttttttttttaata                                                                                                               >  1:989219/1‑124 (MQ=255)
                  tATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTtaat                                                                                                               >  2:2676959/1‑128 (MQ=255)
                   aTTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTtaataa                                                                                                             >  1:3775150/1‑128 (MQ=255)
                    ttGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCC‑tttttttttttttaaataaa                                                                                                             >  2:766952/1‑121 (MQ=255)
                    ttGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTtaataa                                                                                                             >  2:3216592/1‑128 (MQ=255)
                      gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TTATTGAAATT‑AAAATGAATATTTAGATTTTGAATATCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATaaaaa                                                                                                          <  2:5910483/128‑1 (MQ=255)
                      gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATaaaa                                                                                                           >  2:6718713/1‑128 (MQ=255)
                      gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGATGATTTAAATTGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTAAATaaaaa                                                                                                          >  1:3480069/1‑128 (MQ=255)
                       attttgaattAAAGTTTAAATTTTTAATTAAATTTTTAT‑TAATGGTAATT‑TAAATTTATATTTATTTTTTGTATATATGTTTTAAATTGTTTATTAAAAAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAg                                                                                                         <  1:4937748/119‑1 (MQ=255)
                       aGTTGCAATTAAATTTTAAATTGAATATAAAATTGATAT‑TTATGGAAAGT‑CAAATTAATATTTATATTTTGAATATCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTTAATaaaa                                                                                                           <  2:6018509/128‑1 (MQ=255)
                       aGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATaaaaaa                                                                                                         >  1:5996017/1‑127 (MQ=255)
                        gTTGCAAGTAAATGTCAAATTGATAATAAAATTGATAT‑TAATGGAAAGT‑CAAATTAATATTTATATTTTTAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGa                                                                                                        <  2:6591221/128‑1 (MQ=255)
                         ttGCAATTAAATTTAAAATTGATAATAAAATTGATAT‑TAATGGAAAGT‑CAAATGAATATTTTTATTTTTAATAGCTGAATTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAc                                                                                                       <  2:4824766/128‑1 (MQ=255)
                           gCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATaaaaaaaaa                                                                                                      >  2:7062252/1‑124 (MQ=255)
                           gCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACta                                                                                                     >  2:4954444/1‑127 (MQ=255)
                              aGTAAAGTTCAAATTGATAATAAAATTTATAT‑TAATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTcact                                                                                                  <  1:725360/128‑2 (MQ=255)
                               gTAAATTTCAAATTGTTATATAAATTTTTAT‑TAATGGAAAGT‑TAAATGTATATTTAGAATTTGAATAGCTGATTTAAATGGTTTATTAAACAAAGCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACAt                                                                                                 <  1:6670629/128‑1 (MQ=255)
                               gTAAAGTTAAAATTTATAATAAAATTGATAT‑TCATTGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGTTTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTcactt                                                                                                 <  1:646902/128‑3 (MQ=255)
                                ttaatgtaaaaTTTTTAAAAAAATTTTTTT‑TAATGGAAAGT‑CAAATTAATTTTTTTTTTTTTCAAATCTGTTTTAAAATGAATATTAAACAAACCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACTTa                                                                                                <  1:3052055/120‑1 (MQ=255)
                                tAAATTTAAAATTTATAATAAAATAGATAT‑TAATTGAAATT‑AAAATTAATATTTATATTTTGTATATCTTAATTAAATTGATTAATAAAAAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACAt                                                                                                 <  2:856918/128‑1 (MQ=255)
                                tAAATTTAAAATTTATAATAAAAATTTTAT‑TCATTGAAAGT‑CAAATTTATTTTTATATTTTTAATATCTGATTTAAATGTATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACTTa                                                                                                <  1:1148591/128‑1 (MQ=255)
                                tAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAcacaaaaa                                                                                                >  1:3658518/1‑124 (MQ=255)
                                tAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAATAACATa                                                                                                >  1:2336636/1‑128 (MQ=255)
                                  aaGTTCAAATTGTTAATAAAATTTTTAT‑TCATGGAAATT‑CAAATGAATATTTAGATTTTGAATATCTGATTTAAATGGATTATTAAAACATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAg                                                                                              <  2:442940/128‑1 (MQ=255)
                                  aaGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTTATTTAAATTTATTATTAAACAAT‑AA‑ATTTTTTTTTTTTTTAATaaaaaaaaaaacatata                                                                                              >  2:4718432/1‑116 (MQ=255)
                                   aGTTTAAATTGTTAATAATCTTGCATT‑TCATGGAAACT‑TAAATGTATATTTTGTTTTTGTATATGTTTTTTTAATTGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGt                                                                                             <  1:6585802/128‑1 (MQ=255)
                                   aGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTTATtaaaaaaaaacaaataa                                                                                              >  2:5662662/1‑116 (MQ=255)
                                   aGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATaaaaaaaataaaataat                                                                                              >  2:5103644/1‑116 (MQ=255)
                                   aGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATACTAACATaatt                                                                                             >  2:6949867/1‑126 (MQ=255)
                                    gTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTg                                                                                            <  2:6817361/128‑1 (MQ=255)
                                     ttCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAATCACTCACATAAGTGa                                                                                           >  1:2587948/1‑128 (MQ=255)
                                         aaTTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCAA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTaaa                                                                                      >  2:2472200/1‑128 (MQ=255)
                                          atttttaataaAATTTTTAT‑TTAATGAAATT‑AAAATTTATATTTATTTTTTTTATATCTGATTTAAATGTATTATTAATCAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCaa                                                                                      <  1:384863/123‑1 (MQ=255)
                                          aTTTATAATAAAATTTATAT‑TAATGTAAAGT‑AAAATGAATATTTATATTTTGAATATCTTATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCaa                                                                                      <  2:7168897/128‑1 (MQ=255)
                                              ataataAAATTTTTAT‑TTATTGAAATT‑CAAATTTATATTTATTTTTTGAATATCTGTTTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTg                                                                                   <  1:6806916/128‑1 (MQ=255)
                                               taataaAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATATCTTATTTAAATGGATTATTAAACAATTCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGa                                                                                <  2:2560506/128‑1 (MQ=255)
                                               taataaAATT‑TTATATCATTGAAATTACAATTAAATATTTTATTTTTAAATACCTATTTTAATTGCATT‑TTAAAAAAACCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGTGTCAATTGCg                                                                                 <  2:1743910/128‑1 (MQ=255)
                                                aataaAATTTATAT‑TAATTGAAAGT‑CAAATTAATATTTATTTTTTGTATAGCTGTTTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGa                                                                                <  1:844139/128‑1 (MQ=255)
                                                   aaaaTTGATAT‑ACATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAATCAAATAATTTATTAAATTGCTatta                                                                             >  1:2167665/1‑128 (MQ=255)
                                                     aaTTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGattatt                                                                           <  2:3350524/128‑1 (MQ=255)
                                                           tat‑TCATGTTAAGT‑CAAATGAATATTTATATTTTTAATATATTATTTAAATTGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaatt                                                                      <  2:1889022/128‑1 (MQ=255)
                                                                cATGGAAATG‑AAAATGAAAATTTATATTTTGAATAGCTTATTTAAATGGATTTTTAAAAAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattatta                                                                  <  1:6138543/128‑1 (MQ=255)
                                                                 aTGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATAATAAAATAATTTATTAAATTACTATTATttaattattaat                                                                >  2:4169934/1‑128 (MQ=255)
                                                                 aTGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAAT‑CA‑ATTTTTTTTTTTTTTAATAAAAAAAATAAAATAATTTAGTAAATTGCGATTATttaattattaat                                                                >  2:5264436/1‑128 (MQ=255)
                                                                  tGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATACTCACATAATTGAGTCAATTGCGATTATttaattataaata                                                               >  1:1440270/1‑127 (MQ=255)
                                                                         t‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTAAATTGAGATTATTTAATTATTAATTATTAttt                                                        >  2:6139393/1‑128 (MQ=255)
                                                                         gtgaaaTGTATATTTTTATTTTTAATTTTTTATTTAAATTTATTATTAAAAAATCTA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTCtt                                                         <  1:4104228/125‑1 (MQ=255)
                                                                           aaaaTTAATTTTTAGTTTTTGAAATGCTGATTTAAATGGATTATTAAACAATACA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTtga                                                      <  1:4240573/127‑1 (MQ=255)
                                                                               tGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTATTTATTAATTATTATTttataa                                                   >  2:648883/1‑126 (MQ=255)
                                                                                gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAATAAAATAAGTGATTAAATTGAGATTATTTAATTATAAATTATTATATGATGaa                                                  >  2:3571349/1‑128 (MQ=255)
                                                                                gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAAACTCAAATAAGTTATTAAATTAAGATTATTtaattattaattataattttattaa                                                  >  1:2745034/1‑117 (MQ=255)
                                                                                gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAAACACACATAAATGAGTCAATTGCGATTATTTAATTATTAATTATTATTTGATTaa                                                  >  2:4043904/1‑128 (MQ=255)
                                                                                   tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTAAATTGCTATTATTTAATTATTAATTATTATTTTATGAAATa                                               >  1:58724/1‑128 (MQ=255)
                                                                                   tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAAAAAAAAGACTCACAAAAGTGAGTCAATTCCGAATATTTAATTATAAATTATTCTTTGATGAACTAt                                              >  1:5112037/1‑128 (MQ=255)
                                                                                    atTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAAAAACACATAATTGATTCAATTGCAATTATTTAATTATTATTTATTCTTTTATGAACTAt                                              >  1:1009796/1‑128 (MQ=255)
                                                                                    atTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTAAATAAAAAAACTCCAATTAGTGAGTCAATTGCTATTATTTATTTTTTAATTTTTAATTTATGAAatat                                              >  2:5506446/1‑128 (MQ=255)
                                                                                     ttttGATTTTTATAAGCTTATTTTAATGTATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGGTTTTCAATTGCGTTTATTTAATTATTAATTATT‑TTTGATGAACTAttt                                            <  2:5413014/128‑1 (MQ=255)
                                                                                        aGATTTTGAATAGCTGATTTAAATGTTTTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTAc                                          <  1:6236923/128‑1 (MQ=255)
                                                                                          aTTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAAAAAAAATAATAAAATAATTGTGTCAATTTATATTATTTAATAATTAATTATTATTATAATAAATATTTAcat                                        >  1:5656317/1‑126 (MQ=255)
                                                                                           ttttGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACcttt                                      >  2:6216847/1‑128 (MQ=255)
                                                                                             ttttatatCTGATTTTAATGGATTATTAAACAATATA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACctttc                                     <  1:6901719/124‑1 (MQ=255)
                                                                                               taattttttttttAAATTGATTTATAAAAAATTCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACctttct                                    <  1:449260/118‑1 (MQ=255)
                                                                                                 aTAGCTTATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACctaaagaaag                                <  2:2819120/128‑9 (MQ=255)
                                                                                                   aGCTTATTTTAATTGATTATTAAACAAT‑‑A‑ATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGt                              <  1:5237554/128‑1 (MQ=255)
                                                                                                    gCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATACTAACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTATTTGATGAACTATTTACATTTATTTAGGt                              >  2:6357354/1‑128 (MQ=255)
                                                                                                    gCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCAAATAATTGAGTCAATTTGGATTTTTTAATTATTTTTTATTATTTTATTAAATATTTACATTTCTTTTGGt                              >  1:1593612/1‑128 (MQ=255)
                                                                                                     cagATATAAATGGATTATT‑AATAAT‑TA‑GTTTTTTTATTTTTTTATAAAAAGACTCTCATAAGTGAGTTAATTGCGATTATTTAATTATTAAATATTCTTTGATTAACTATTTACCTTTCTTTAGGTaa                            <  2:1347334/126‑1 (MQ=255)
                                                                                                      tGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAATTGAGTCAATTGCGATTATTTAATTATTAATTATTATTTGATGAACTATTTACATTTATTTATGTa                             >  1:2475738/1‑128 (MQ=255)
                                                                                                      tGATTTAAATGGATTATTAAACAATACA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTaa                            <  2:1994526/128‑1 (MQ=255)
                                                                                                      gtaTTTAAATGGATTATTAAAAAATACA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTAAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTaa                            <  1:6358262/126‑1 (MQ=255)
                                                                                                          ttAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACACACAGAAGTGTGTAAATTGGGATTATTTAATTATTAATTTTTATTTGATAAAATATTTACCTTTCTTTAGTTAAAtat                        >  1:1288161/1‑127 (MQ=255)
                                                                                                              aTGGATTATTAAACAATCCATTTTTTTTTTTTTTTTAATAAAAAGACTCAAATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTATTTGATTAAATTTTTAACTTTATTTAGGTAAAtaatt                      >  2:4303609/1‑128 (MQ=255)
                                                                                                               ttgtttattaATAAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATTAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACtaattaat                   <  1:1999064/124‑1 (MQ=255)
                                                                                                                ggATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTaattaatt                  <  2:2962478/128‑1 (MQ=255)
                                                                                                                ggATTATTAAACAATACA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTaattaatt                  <  2:3442765/128‑1 (MQ=255)
                                                                                                                 gttttttaAACAAT‑AA‑ATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAattaatta                 <  1:4632783/123‑1 (MQ=255)
                                                                                                                    tattaAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAATTGAGTCAATTGCGATTATTTAATTATTAATTATAATTTGATCAACTATTTACATTTCTTTAGGAAACTAATTATTTACCt              >  1:3320217/1‑128 (MQ=255)
                                                                                                                     gtttaataaTCCA‑TTTTTTTTTTTTTTTAATAAAAAAACTCACATAAGTGATTCAATTGCGATTTTTTAATTTTTAATTATTCTTTGATGAACTATTTACATTTATTTAGTAAAATAATTAATTAcat              >  1:5489123/8‑126 (MQ=255)
                                                                                                                      ttaTACAATCCA‑‑TTTTTTTTTTTTTTAATAAATAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTaa            <  2:3775150/128‑1 (MQ=255)
                                                                                                                          aCAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAAACACACAAAATTGAGTAAATTGCAGTTATTTAATTATTAATTATTAATTTATTAAAATATTACCATTAATTATGTAACAAATTAAATAACTAAtttta       >  1:5776952/1‑128 (MQ=255)
                                                                                                                               ccA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTTAGTCAATTGCGATTATTTAATTATTAATTATTAATTTATTAAATATTTACAATTATTTAGGTAAATAATTAATTACATAATATTAttt    >  2:4550805/1‑128 (MQ=255)
                                                                                                                                 |                                                                                                                                
TTGTGTAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATAT‑TCATGGAAAGT‑CAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTA  >  CP016816/87775‑88029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.