| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 203895 | 434 (0.150) | 419 (0.130) +TTT |
112/212 | 27.1 | 46.6% | intergenic (+279/+179) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase |
| ? | CP016816 | 203896 = | 488 (0.150) | intergenic (+280/+178) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 972 total aligned reads displayed.
TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA > CP016816/203769‑204023 | tAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACTCTTTCAAAG‑TGTATTTTTTAGG‑‑‑A‑‑TTG‑‑‑‑‑tt > 2:5167438/1‑128 (MQ=255) ttttttttATAAAAAAAATTTAAAATTTTTAATTTAAATCCATTTTTAAAAAACCCTATTTTTTTGTGTTTTTATTTAAATTTTAAAAAT‑TAAAACGCTTTCAAAT‑TGTTTTTTTTTTG‑‑‑C‑‑ttt‑‑‑‑‑ttttt < 1:609297/128‑1 (MQ=255) ttttttttA‑AAAAAAAAATAAAAATTTTTTATTTTAACCCATTTTTTAAAAACCCTTTTTTTTTTGCTTTTTTTTATAATTTTAAAAAT‑TAAAACGCTTTTAAAT‑TGTTTTTTTTTTG‑‑‑G‑‑Ttt‑‑‑‑‑ttttt‑‑t < 1:1904046/128‑1 (MQ=255) ttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑tttt > 1:6807849/1‑128 (MQ=255) ttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCGAGGCTTTTTTTTATACTTATCAACAT‑TACAAATATTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑tttt > 2:6251912/1‑128 (MQ=255) ataAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑tttttttt > 1:5402164/1‑128 (MQ=255) aaaaaataTAAAAATTTTTCTTTTAAATCCATTTTTTAAAAATCATATGTTTTAGGCTTTTTATTATAAATTTCAAAAT‑TAAAACGCTTTAAAAG‑TGTTTTTTTTATG‑‑‑G‑‑TTG‑‑‑‑‑ttttt‑‑ttttttttt‑‑tt < 1:1366950/128‑1 (MQ=255) aaaaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTC‑‑‑‑‑ttatt‑‑atatattttgt > 2:1290843/1‑126 (MQ=255) aaaaataaaaatTTTTCATTTAAAGCCATTTGTACAAAAGCCAATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAC‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑ttttttttt‑‑ttttg < 2:1516752/128‑4 (MQ=255) aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑ttttttttt‑‑ttttt > 2:899268/1‑125 (MQ=255) aaaataaaaatTTTTAATTTAAAGCAATTTTTAAAAAAGAATTTGTTTATTGGTTTTTATTTAAATTTTAAAATT‑TAAAAAGCTTTCAAAT‑TGTTTTTTTTAGG‑‑‑C‑‑Ttt‑‑‑‑‑ttttt‑‑ttttttttt‑‑ttttgt < 1:7175447/128‑5 (MQ=255) aaaaaaatTATTTAATTAAACCCAATTTTTAAAAATCCTATGTTTTTTGTTTTTTTTTATAATTTTAAAAAA‑TACAACTCTTTTAAAT‑TTTATTTTTTTTG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑ttttttttt‑‑tttttgtaa < 1:619261/126‑8 (MQ=255) taaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑ttttttttt‑‑tttttttaaa > 2:213417/1‑120 (MQ=255) aaaatTTTTTATTTTAACCCATTTTTTAAAAAGTCTATTTTTTTTGTTTTTTTATATACTTTTTAACAA‑TAAAACGGTTTAAAAGTTTTTTTTTTTGGG‑‑‑T‑‑TTT‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATa < 1:6263586/128‑1 (MQ=255) aatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATaaa > 2:5651818/1‑128 (MQ=255) aatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑ttttt‑‑ttttttttt‑‑tttttttaaaaata > 1:673539/1‑116 (MQ=255) atTTTTTATTTAAACTCATTTTTAAAAAATACTATTTTTTATGCTTTTTATTTTAATTTTAAAAAT‑TAAAAAGCTTTAAAAT‑TGTTTTTTTTAGG‑‑‑CT‑TTT‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATaaaa < 2:1971961/128‑1 (MQ=255) ttttTATTTAAATCCATTTTTAAAAAAGACTATTTTTTTTGTTTTTTTTTATTATTTTTAAAAT‑TACAACTCTTTAAAAT‑TTTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAg < 2:6028827/128‑1 (MQ=255) ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAg > 2:6465565/1‑128 (MQ=255) ttttAATTTAAATTAATTAGTAAAAAAGCCTTTTTTTATGGTTTTTTATTATAATTATTAAAAT‑TAAAAACCTTTCAATT‑GTTTTTTTTTATGATTT‑‑TTT‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATaaaa < 1:6464063/128‑1 (MQ=255) tttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑‑‑‑T‑‑‑AAAAATAAAATTaaatt > 1:4447916/1‑125 (MQ=255) tAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAATTAAGAtt > 2:4110948/1‑128 (MQ=255) aatccctttGTAAAAATGCCTATGTTCTTTGCTTTTTATTATACTTATCAACAT‑TACAACGCTATAAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGa < 2:5725707/122‑1 (MQ=255) agacATTTTTAAAAAAGCATATTTTATAGTCTTTTTATTTTAATTTTAAAAAT‑TAAAACGTTTTAAAAG‑TTTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGAt < 2:1689843/125‑1 (MQ=255) gCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAAGTAAAAATTTGAta > 2:3792676/1‑127 (MQ=255) tcATTTTTAAAAAATTATATTTTTTTTGTTTTTTTTTTTAATTTTAAAAAT‑TAAAAATTTTTTAAAT‑TTTTTTTTTTAGG‑‑‑T‑‑TTTTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATc < 2:1786061/127‑1 (MQ=255) cATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAAAttttgttc > 2:6537918/1‑123 (MQ=255) aTTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTAACAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑A‑‑TTG‑‑‑‑‑TTTTTTATTTTTTTTT‑‑TTGT‑‑‑AAAATAAAAAGTAATTTTTGGATaaa > 2:5955118/1‑128 (MQ=255) ataataaaaaGCCTAGATCATAGGCTTTTTATTATACTTATCAACAT‑TAAAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTATTATTTGGTTCAGcc > 2:4447604/6‑128 (MQ=255) aaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTGGATAAACAaaaaa > 1:216970/1‑127 (MQ=255) aaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAATAAGTATTGTAACAACAaaaaaaa > 1:3562497/1‑125 (MQ=255) gCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTTT‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑TAATATAAAAGTAATATTTGGATAAACCaaaaattt > 2:425908/1‑124 (MQ=255) cTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAATTAAGATTTGGATCAACCAAAACttattcaaa > 2:3390368/1‑120 (MQ=255) tttttttttggCTTTTTTTTATAATTATTAAAAT‑TTAAACGCTTTCAAAT‑TTTATTTTTTTTG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCaaa < 1:548521/119‑1 (MQ=255) tATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAGTAATATTTGGATAAACCAAAAAATTATCaaa > 2:5799791/1‑128 (MQ=255) tGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTTAAATTTGGTTAAAACAATAATATATCaaaa > 1:2814573/1‑128 (MQ=255) gTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAATTAAAAGTAATTTTTTGTTAAAACAAAAAAATATAaaaa > 2:3867073/1‑128 (MQ=255) ttCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTTTTTTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTTTGATTTGGTTCAACCAAAAGTATATaaaa > 2:6774635/1‑128 (MQ=255) ttCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑TAAATTTAAAGTTAGTTTTGGTTCAACACACAGTTTATAaaaaaa > 2:7038732/1‑128 (MQ=255) tttttgCTTTTTATTATAATTATTAAAATATAAAAC‑CTTTTAAAT‑TGTTTTTTTTATG‑‑‑CTTTTT‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCaaaaaaa < 1:748019/123‑1 (MQ=255) cTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGGCATC‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTG‑‑‑‑AAAAAAAAAAATAAGATTAGGATAAAACAACACAATaaaaaaaaaaa > 1:3859667/1‑127 (MQ=255) cTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAGTAATATTTGGATCAACCAAAAAATTAAAAAAAAAAt > 2:2492448/1‑128 (MQ=255) atAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATTTTTTGATCAACCAAAAATTTATCAAAAAAAtt > 2:3719765/2‑128 (MQ=255) tAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAATTAATATTTTAATCAACAAAATATATATaaaaaaaaat > 2:2361205/1‑126 (MQ=255) aGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑‑TTTT‑‑TTTTTTTTT‑‑TGGT‑‑‑AAAAATAATATAATAATTTTGAAAAACCAAAAC‑CTTTAAAAAAAATTtaaaa > 1:4629252/1‑128 (MQ=255) ttcTTTTTATTATATTTATAAAAAT‑TAAAAAGCTTTTAAAT‑TGTATTTTTTTTG‑‑‑CT‑TTT‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaa < 1:5942744/126‑1 (MQ=255) tgttttttATTATTCTTTTTATAAT‑TTCTTCTCTTTCTATT‑TGTTTTTTTTTTG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaa < 2:6380384/125‑1 (MQ=255) tttttATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAATAATATTTGGATCAAACAAAAATATATCAAAAAAATTaaaaa > 1:6370670/1‑128 (MQ=255) attatACTTATAAAAAT‑TACAAATATTTAAAAG‑TTTATTTTTTTTG‑‑‑CT‑TTT‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtag < 1:5568642/128‑1 (MQ=255) ttatACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAATTAATATTTTGATAAAAAAAAAAAATATAAAAAAAATTaaaaaaaaaa > 2:1036203/1‑126 (MQ=255) ttatACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTTTTAAAAAATAAAATTAA‑ATTTTTGTAAACAAAAAAATTAAAAAAAAAAATaaaaaaaaaaa > 2:684088/1‑125 (MQ=255) tataCTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTTTTAAAAAAAAAAAGTAAAATTTTTATAAACCAAAAATATTTAAAAAAAATTTAAAAAAAtat > 2:2651847/1‑127 (MQ=255) taCTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAATAAAATTTTGATAAACCAAAAATATAAAAAAAAAATTAAAAAAAAtaatt > 2:5481957/1‑128 (MQ=255) taCTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAAGTTTTGGAAAAACCAAAAATATATAAAAAAAATTAAAAAAAAtatttta > 1:233195/1‑128 (MQ=255) taCTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAA‑AAAAGTAATATTTTGATAAACCAAAACTATAAAAAAAAAGATAAAAAAAAtatttttta > 1:4900362/1‑125 (MQ=255) ttATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAATTTTTGGATCAACCAAAAAAATAAAAAAAAAATTAAAAAAAAtaatttagt > 1:7072102/1‑128 (MQ=255) tATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGA‑‑‑AAAAAAAAAATTAATTTTTGGATAAACAAAAACAATAAAAAAAAAATTAAAAAAAAtattttattt > 2:4363477/1‑128 (MQ=255) ttaaaaaT‑TAAAACGCTTTAAATG‑TGTTTTTTTTTGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagtttagtt < 1:880167/122‑1 (MQ=255) tgaaact‑tACAACTCTTTCTAAT‑TTTTTTTTTTTGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGa < 1:5806017/122‑1 (MQ=255) aaaaT‑TACAACGTTTTTAATT‑TTTATTTTTTATG‑‑‑T‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGt < 2:5410801/125‑1 (MQ=255) aCAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTTT‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAATAAAAATTTTAAACCACAAAAAATAAAAAAAAAAAAATAAAAAAAAtatttaaattcat > 2:3501229/1‑120 (MQ=255) cAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTTTATAAACAAAAAATTATTAAAAAAAATTAAAAAAAAAattttattttatttt > 2:2851654/1‑128 (MQ=255) aT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTTT‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAAAATTTGGATAAACAAAAAATATAAAAAAAAAATTAAAAAAAAaagtttattttattt > 2:6431006/1‑123 (MQ=255) aT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTTGAACAACCAAAAAATTTAAAAAAAAATTAAAAAAAAAattttattttatttta > 1:7006434/1‑127 (MQ=255) t‑tACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTGGATAAAACAAAAATATAAAAAAAAAATTAAAAAAAATATTTTAGTTTAttttaa > 1:6580513/1‑126 (MQ=255) tACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTTT‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAATTAATTTTTGGATAAACCAAAAGATTATAAAAAAAATTAAAAAAAATAGTTTTTTTTAGttta > 2:3247789/1‑127 (MQ=255) aCAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑TAAAATAAATTTAAGATTTGGATAAACAAAAAATTTTAAAAAAAATTTAAAAAAAAtatttttgttttggtacaaagg > 1:1509632/1‑116 (MQ=255) cAACGCTTTCAAAG‑TGTATTTTTTAAG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTTTATTTT‑‑‑AAAAATAAAATTAAAATTTTGATAAACCAAAAATATATAAAATAAAATAAAAAAAAAATTTAAGTTTAGattacaat > 2:2979897/1‑123 (MQ=255) aCGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAAGTTTTGTATCAACCAAAAATATTTAAAAAAATATAAAAAAAATTTTTTATTTTATTTTAAAAtg > 1:1162910/1‑127 (MQ=255) aCGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATTAAATTAATATTTGGATACACCAAAACTATATAAAAAAAATTAAAAAAAATAGTTTAGTTTAGTTTCAAATCt > 1:5700307/1‑128 (MQ=255) gCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑TAAATTAAAAGTAAGATTTGGATCAACCAAAAATATATCAAAAAAATTAAAAAAAATAGATTATTTAATTATAAAATCtc > 2:5556664/1‑127 (MQ=255) gCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAAGAACATTTTTGAACAACCAAAACTAAATAAAAAAAAAAAAAAAAAAAACTTTTATTGGTTTTCaataaagc > 1:4770180/1‑122 (MQ=255) gCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTGGAAAAAACAAAAATATATAAAAAAATTTAAAAAAAATATTTTAGTTTATTTTAAAAtaaaaat > 2:5334683/1‑122 (MQ=255) ttCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑TAAAAAAAAATAAATATTTTGATAAACCAAAAAAAAATAAAAAAAATTAAAAAAAAATTTTTTTTTGAGttaaaaaattgtaa > 1:1717135/1‑116 (MQ=255) ttCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAAAAAAAGTAAGATTTGGTTAAACCAAAACTTTATCAAAAAATTTTAAAAAAATAGTTTTGTTGAGGTTCaaagaggcata > 2:3113132/1‑120 (MQ=255) ttCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTTGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATATTTTTGTTGATTTTAAAAtaataatat > 2:1428302/1‑120 (MQ=255) ttCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGT‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAAAAAAAATTTTGATAAAACAAAAATATAAAAAAAAAATTAAAAAAAAAAATTTATTTGAATTTaaaaaattaaaat > 1:1008898/1‑119 (MQ=255) tCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAAAATTTGGAAAAAACAAAAAAATATAAAAAAAATTAAAAAAAAAATTTTTGTTTATTTTCAAATATGCatat > 1:6943725/1‑128 (MQ=255) tCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAATTATTATTTTTATAAACCAAAAATAAATAAAAAAAATTAAAAAAAATTTTTTTTTTTATATTAAAATATGCataa > 2:1140374/1‑127 (MQ=255) tCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAAATAAAAATTGGAAAAACCAAAAAAATTAAAAAAAAATTAAAAAAAATATTTTATTTTAATTTAAAATCTCAatat > 2:4719615/1‑128 (MQ=255) aG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAATATTTTTATAAACAAAAAAATTATAAAAAAAATTAAAAAAAATATTTTTTTTGAGTTTAAAAAATGAatattaa > 2:3654632/1‑125 (MQ=255) aG‑TGTATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATAAACCAAAACTATATAAAAAAAATTAAAAAAAATATTTTATTTGAGTTTCAAAAGTGCATAAATAg > 1:2519992/1‑128 (MQ=255) gtATTTTTTAGG‑‑‑C‑‑TTGTTT‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAAAAAAAGTTAGATTTTGATCAACCAAAACAAAATAAAAAAAAATAAAAAAAAATATTTATTTGATTTTCAAATATGAatataaatta > 1:3699848/1‑123 (MQ=255) gtATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAATTAAAATTTGGATCAACCAAAACTATATAAAAAAAATTAAAAAAAAAATTTTTTTTTAGTTTCAAAACAGCaaataaattaa > 2:5054389/1‑122 (MQ=255) tATTTTTTAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAGTAATATTTGGTTAAACCAAAAATATATAAAAAAAATTAAAAAAAATATTTTATTTGTTTTTAAAATATGCataaatttttaa > 2:6208672/1‑122 (MQ=255) ttttttAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAATTAATTTTTTGATCAACAAAAAAATTATAAAAAAAAATAAAAAAAATAATTTTTTTGTTTTTAAAATCTGAATATTTATTAaaaa > 2:754782/1‑128 (MQ=255) ttttAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAAAAAAATTAATATTTGTATCAAACAAAAAATTTTAAAAAAAATTTAAAAAAATATTTTTTTTTAGTTTAAAATCTACAAATATAgataaattt > 2:4823444/1‑120 (MQ=255) ttttAGG‑‑‑C‑‑TTGTT‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAATTAAAATTTGTATAAACCAAAACTATATAAAAAAAATTAAAAAAAAATTTTTATTTGTTTTTAAAATATGAAAATAAAATAaaaaag > 2:4553038/1‑126 (MQ=255) tttAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAGTAATATTTGGTTAAACCAAAAATATATAAAAAAAATTAAAAAAAATATTTTATTTGAGTTTCAAATATGAATATATATTACaaaataaa > 2:2746513/1‑123 (MQ=255) ttttttttttttttt‑‑ttttttttt‑‑ttGT‑‑‑AAAAATAAAAGTAAGATTTGGATTAACAAAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAt < 2:66658/118‑1 (MQ=255) aggcttgttttttt‑‑ttttttttt‑‑tttt‑‑‑AAAAATAAAATTAATATTTGGATAAACCAAAACTATATAAAAAAATTTAAAAAAAAAATTTTTTTTATTTTTAAAAAATGCATTAATAGTAAAAACTAAtt > 2:825185/10‑128 (MQ=255) ttttttttttt‑‑ttttttttt‑‑ttGT‑‑‑AAAAATTAAAGTAAGATTTGGATAAACCAAAATTATATTAAAAAAATTATAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAt < 1:5028784/122‑1 (MQ=255) g‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTTT‑‑‑AAAAATAAAAGTAAAATTTTGATAAACCAAAAAAAAATAAAAAAAATTAAAAAAAATATTTTAGTTTATTTTAAAATCTGAATATATATTACAAAGGAATTAATtatat > 1:15906/1‑127 (MQ=255) ttgtttttt‑‑ttttttttt‑‑ttGT‑‑‑AAAAATAAAAGTAATTTTTTGATAAAACAAAAATTTATAAAAAAAATTAAAAAAAATATTTTATTTTATTTTAAAAAATGAATATATATTAAAAATGAAATTAtta > 2:6941106/5‑126 (MQ=255) tttttttt‑‑ttttttttt‑‑ttGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAt < 1:5768470/125‑1 (MQ=255) tttttt‑‑ttttttttt‑‑tttt‑‑‑AAAAATAAAAGTAATATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATATTTTATTTTATTTTAAAATATGCATATATATTAAAAAGTAATTTATtatat > 2:190240/2‑127 (MQ=255) tttttt‑‑ttttttttt‑‑ttGT‑‑‑AAATATTATAGTTAGATTTTTATTAATTAAAATTATATTATTATAATTATAAAAAATAGTTTAGTTGAGTTTATAATATGCATATATAGTACAAAGGAATTTATGATAg < 1:4297637/127‑1 (MQ=255) tttttt‑‑ttttttttt‑‑ttGT‑‑‑AAATATAAAAGTAAGATTTTTATAATACAAAAATATATCTAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg < 1:3082512/127‑1 (MQ=255) ttttt‑‑ttttttttt‑‑tttt‑‑‑AAAAATAAAATTAATTTTTGGTTAAAAAAAAATTTTTTAAAAAAAATTAAAAAAAATATTTTTTTTTATTTTAAAATATGAATATATATTAAAAATAAATTAAtattata > 2:399017/1‑122 (MQ=255) ttttt‑‑ttttttttt‑‑tttt‑‑‑AAAAATAAAAGTAAGTTTTGGGTAAACCAAAAATATTTAAAAAAAATTAAAAAAAATATTTTTTTTTTTTTTAAAATATGAATAATAAATAAAAAATAATTTATGATata > 2:7160306/1‑126 (MQ=255) | TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACAT‑TACAACGCTTTCAAAG‑TGTATTTTTTAGG‑‑‑C‑‑TTG‑‑‑‑‑TTTTT‑‑TTTTTTTTT‑‑TTGT‑‑‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA > CP016816/203769‑204023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |