New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202486344 (0.070)800 (0.170) 113/252 29.4 67.6% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 424 (0.090)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 800 total aligned reads displayed.

GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTATA  >  CP016816/202490‑202616
                                                                                                                                                                                                                                                                     
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATACACTTA                                                                                                                                     >  1:1011112/1‑128
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTA                                                                                                                                     <  2:5855156/128‑1
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTA                                                                                                                                     >  2:7973252/1‑128
 TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTTAA                                                                                                                                    >  1:9672444/1‑128
  TAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACATTAAA                                                                                                                                   >  1:8555283/1‑128
   AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAAAA                                                                                                                                  >  2:8601627/1‑128
       TAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTAATATTTGTATATCTTCACAAATAAAAAAAAAAAAATCAAATTAAAAA‑‑Tta                                                                                                                            >  1:9339656/1‑126
        AAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCATTAAAAA‑‑T‑‑‑TAA                                                                                                                        >  2:8820729/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTTATCTATTTTAATATTTGTTTATCTTCACAAATAAAAAAAAACAATCCACTTAAAAA‑‑T‑‑‑TAAAA                                                                                                                      >  2:9658251/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTTATCTATTTTTTTATTTGTTTATCTTAAAAAATAAAAAAAAAACAAAACACTTAAAAA‑‑T‑‑‑AAAA                                                                                                                       >  2:10161817/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAAAAA‑‑A‑‑‑AAAA                                                                                                                       >  1:2468641/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAA‑‑T‑‑‑TAAA                                                                                                                       >  1:8953385/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTATTTTATATATTTATCTTCACAAATAAAAAAAAAAAAAACCCCTAAAAAA‑‑T‑‑‑AAAAA                                                                                                                      >  1:3023818/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAATAAAAAAAAAACAATAACCTTAAAAA‑‑T‑‑‑TAAAA                                                                                                                      >  2:1042019/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAAATTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCCACATAAAAA‑‑A‑‑‑TAAAA                                                                                                                      >  1:9086116/1‑128
           TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTAATTATATATCTTAACAAATAAAAAAAAAAAAATAAAATAAAAAA‑‑A‑‑‑AAAAAA                                                                                                                     >  1:7122774/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTTATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACACATAAAAAA‑‑A‑‑‑TAAAAAA                                                                                                                    >  1:3548506/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATAATCACAAATAAAAAAAAAAAAATAAACTTAAAAA‑‑T‑‑‑TAAAAAA                                                                                                                    >  2:3145068/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCAATAAAAA‑‑T‑‑‑AAAAAAA                                                                                                                    >  1:6771115/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAA‑‑T‑‑‑TAAAAAAAA                                                                                                                  >  2:8941840/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAAACCCATAAAAAA‑‑T‑‑‑AAAAAAAAA                                                                                                                  >  1:8038955/1‑128
               AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCATAAAAA‑‑A‑‑‑TAAAAAAAAA                                                                                                                 >  1:2731718/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAA                                                                                                             >  1:8357638/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAA                                                                                                             >  1:5568334/1‑128
                    TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAA                                                                                                            >  1:10014824/1‑128
                    TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAA                                                                                                            >  1:1177382/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAA                                                                                                           >  1:7875017/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATACCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAA                                                                                                           >  1:8462524/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCACATAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAA                                                                                                           >  1:3413929/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAAACAAATAAAAAA‑‑A‑‑‑TAAAAAAAAAAAAAAA                                                                                                           >  1:629442/1‑128
                      AGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAA                                                                                                          >  1:1320918/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCTTGATATATTTTTTAATTTTTTTATCTTCACAAAAAAAAAAAAAACAAAACAATAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAA                                                                                                         >  2:3054352/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAA                                                                                                         >  2:8892657/1‑128
                        GTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATACCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAA                                                                                                        >  1:8129507/1‑128
                         TTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAACAATCACATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAA                                                                                                       >  2:2388169/1‑128
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACATAAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAAa                                                                                                     >  2:8332284/1‑127
                            ATTAAAATACCATAAACTTAATAATTCTTATAATTTAGATCCTCGTGATCTATTTTTTTATTTTTTTATATTCACAAATAAAAAAAAAAAAATACCCTAAAAAA‑‑A‑‑‑AAAAAAAAAAAAAAAAAAAAAaa                                                                                                    >  1:5826433/1‑126
                            ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCATAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAAaa                                                                                                    >  1:4162234/1‑126
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAAATCACATTAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAAaa                                                                                                    >  2:10223147/1‑126
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAATAAAAAAAAAAAAATCCACTAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAaaa                                                                                                   >  2:2161544/1‑125
                              TAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACATTAAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAAaaa                                                                                                   >  2:1311002/1‑125
                              TAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAACAAAAACCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAaaaa                                                                                                  >  2:7904493/1‑124
                               AAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAACAATCCCATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAaaaa                                                                                                  >  2:8160302/1‑124
                               AAAATACCATAAACTTAATAATTCTTATAATGTAGATCATCGTGATCTATTTTTTTATTTGTTTATATTAACAAATAAAAAAAAAACAAAACCATAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAaaaaa                                                                                                 >  1:4833587/1‑123
                                 AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAaaaaaca                                                                                               >  1:7976078/1‑121
                                 AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAACAATAAACTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                               >  2:3882174/1‑128
                                     CCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTAAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAAtaaaa                                                                                           >  1:9821636/1‑123
                                      CATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAa                                                                                          >  1:3167808/1‑127
                                                          aAATGTTGAACATCGTGTTCTATTTTTTTATTTTTTTATCTACACAAAAAAAAAAAAAACAAACCCCTTAAAAA‑‑A‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCT                                                                      <  2:1524731/127‑1
                                                                        ttttttTATTTTTTTATTTTTTTATATTAAAAAAAAAAAAAAAAAAAATCACATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                        <  2:6288167/122‑1
                                                                          tattTATTTTTTTATTTTTTTATATAAAAAAAAAAAAAAAAAAAAATCACCTTAAAAA‑‑A‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTA                                                      <  1:2092972/124‑1
                                                                               ATTTTTTTATTTTGTTATTTTAAAAAAAAAAAAAAAAAAAAAACCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTT                                                  <  1:8274931/128‑1
                                                                               ATTTTTTTATTTGTTTATATTAACAAATAAAAAAAAAAAAAATACATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                                <  1:9492180/128‑1
                                                                                TTTTTTTTTTTTTTTTTATTAAAAAATAAAAAAAAAAAAATCCACTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                                <  2:81002/128‑1
                                                                                 TTTTTTATTTGTTATTATTAAAAAAAAAAAAAAAAACAATCCCCTTTATAA‑‑T‑‑‑TATAAAATAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAA                                               <  2:4172303/128‑1
                                                                                    ttatTTTGTTTATATTAAAAAAAAAAAAAAAAAAAATAACAATAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAA                                             <  1:3807114/124‑1
                                                                                     TTATTTTTTTAAGTTAAAAAAAAAAAAAAAAACAATCCCCTTAAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAAT                                            <  2:493838/128‑1
                                                                                     TTATTTTTTTAAATTAAAAAATTAAAAAAAAACAATCCCATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATA                                           <  2:10346899/128‑1
                                                                                      ttTTTTTTTATATTCAAAAAAAAAAAAAAAAAAATACCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                          <  1:9160376/126‑1
                                                                                      TATTTTTTTATATTCCAAAAAAAAAAAAAAACAAACCCCTTAAAAA‑‑TTACAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAA                                             <  2:7203421/128‑1
                                                                                      TATTTTTTTATAATAAAAAAAAAAAAAAAAAAAATACCCATTAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                          <  2:2792337/128‑1
                                                                                       ATTTTTTTAAATTTAAAAAAAAAAAAAAAAAAATACCCTTAAAAA‑‑TTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATA                                           <  2:6454925/128‑1
                                                                                        TTTTTTTATATTAAAAAAAAAAAAAAAAAAAATACCATTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                         <  1:8889675/128‑1
                                                                                         tttTTTATATTAAAAAAAAAAAAAAAAACAAATCCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                        <  1:8654292/125‑1
                                                                                         TTGTTTATATTAAAAAAAAAAAAAAAAAAAATACACTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                        <  2:5736225/128‑1
                                                                                           GTTAATCTTCAAAAAAAAAAAAAAAAAAATACCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                    <  2:8031679/128‑1
                                                                                             ttttattaaaAAATAAAAAAAAAAAAATACACTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                    <  2:6151621/118‑1
                                                                                             ttttaataaaAAAAAAAAAAAAAAAAAAACCCTTAAAAA‑‑TTAAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                      <  2:9364527/118‑1
                                                                                             ttaaatttaaAAATAAAAAAAAAAAAAAAACTTAAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                    <  2:7363909/118‑1
                                                                                              tatattaaaAAAAAAAAAAAAAAAAAAACACATAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGA                                  <  1:5460674/119‑1
                                                                                               atattaaaAAATAAAAAAAAAAAAATACCCTTAAAA‑‑‑‑‑AATAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                               <  2:251743/120‑1
                                                                                                aaataaaAAAAAAAAAAAAAAAAATACAATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                                <  1:1021193/121‑1
                                                                                                aaataaaAAAAAAAAAAAAAAAAAACCCCTTAAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGAC                                 <  2:3458812/121‑1
                                                                                                 attaaaAAATAAAAAAAAAAAAATACCCTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATA                              <  2:8476114/122‑1
                                                                                                 attaaaAAAAAAAAAAAAAAAAATCCCATTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                               <  2:6922254/122‑1
                                                                                                  TTCAAAAATAAAAAAAAAAAAAAAACCTTAAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                                <  2:9401191/128‑1
                                                                                                    aaaAAAAAAAAAAAAAAAAATCCCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAA                             <  2:1080800/125‑1
                                                                                                    aaaAAAAAAAAAAAAAAAAATACACATAAAAA‑‑TAAAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                               <  2:9796438/125‑1
                                                                                                     aaAAAAAAAAAAAAAAAAATACCCTTTAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATA                           <  2:3639251/126‑1
                                                                                                         aaaAAAAAAAAAAAAATACCCTTAAAAAA‑‑TAAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATA                           <  1:9981309/125‑1
                                                                                                          tatAAAAAAAAAAAATATCATTAAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTAACTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                         <  1:8803524/125‑1
                                                                                                          aaAAAAAAAAAAAAATCCACTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATA                       <  2:4771114/126‑1
                                                                                                          aaAAAAAAAAAAAAATCCAATTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATAT                        <  2:1010180/126‑1
                                                                                                          aaAAAAAAAAAAAAATACCCTTAAAAA‑‑TTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                         <  2:3740441/126‑1
                                                                                                            AAAAAAAAAAAAAAAACCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAAATAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATAT                      <  2:7817110/128‑1
                                                                                                             AAAAAAAAAAAAACCACTAAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                     <  2:4427826/128‑1
                                                                                                              AAAAAAAAAAAAACACTTAAAAA‑‑TTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                     <  2:9009297/128‑1
                                                                                                               AAAAAAAAAATCCCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA                   <  2:5564164/128‑1
                                                                                                                 AAAAAAAATACCTTTAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAA‑‑TAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA              <  2:5380611/128‑1
                                                                                                                   aataAATTCCCTTTAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA              <  2:7603164/124‑1
                                                                                                                   AAACAATCCACATAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA              <  2:8712564/128‑1
                                                                                                                   AAAAAATACCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATAT               <  2:1168053/128‑1
                                                                                                                      aaaacaatTTAAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT           <  2:6769454/120‑1
                                                                                                                      aaaaaaccaTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT           <  2:1795798/119‑1
                                                                                                                        atacaaTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAA         <  2:914685/122‑1
                                                                                                                         taaaaTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAACATATATAAT        <  2:52111/123‑1
                                                                                                                           ccaTTAAAAT‑‑A‑‑‑AAAAAAAAAAAAAAAAAAAAACTCAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC      <  2:9532530/125‑1
                                                                                                                            CCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAATAAAACTAAAAAAAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC      <  2:1988610/128‑1
                                                                                                                             CTTAAAAA‑‑TTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC      <  2:9248740/128‑1
                                                                                                                             CTTAAAAA‑‑T‑‑‑TAAAAAAAAAAAAAAAAAAAACAAAAAACAAACACTATTTATTAAAAATCCCTATTATACCACATTTTATTTTTAAAATAAAATATTGAAAAAATATATATATATTATATATAATAATA    >  1:1085965/1‑128
                                                                                                                                                                                                                                                                     
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAA‑‑T‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTATA  >  CP016816/202490‑202616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.