New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 117946 =5493 (1.130)208 (0.050) 115/212 23.9 4.4% intergenic (+67/+792) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
?CP016816 = 117942 4520 (1.110)intergenic (+63/+796) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 5711 total aligned reads displayed.

AAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTAAAC  >  CP016816/117819‑118073
                                                                                                                                |                                                                                                                                
aaaTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAATGTATTGCTTTTTTATAAATATACAAATTTTAAA‑CAGCAACAAtatt                                                                                                                                  >  2:1381173/1‑128 (MQ=255)
   tttaagagaagaATGAAAAAAATAGTACTAGATTAAAAATAAAAAAATAAATAAATAATTTTATAATAAATAAATAAAGTTATTGATTTTTTATAAAAATAAAAATTTTAAA‑AAGAAAAAAtattatt                                                                                                                               >  1:919757/4‑128 (MQ=255)
      aagagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtatttttatt                                                                                                                            >  2:1550933/1‑128 (MQ=255)
      aagagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattatt                                                                                                                            <  1:1072488/128‑1 (MQ=255)
      aagagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattatt                                                                                                                            >  2:3154224/1‑128 (MQ=255)
       agagaagaATGAAAATAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattatta                                                                                                                           <  2:6815106/128‑1 (MQ=255)
       agagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAATCAATACCTCAAGTTATTTCTTTTTTATAAAAATACAAATTTTAAA‑AAGCAACAAtattattatta                                                                                                                           >  2:8272556/1‑128 (MQ=255)
       agagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattatta                                                                                                                           <  2:9607504/128‑1 (MQ=255)
       agagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCATTTTTATAAAAATACAAATTTTATA‑CAGCAACAAtattattaata                                                                                                                           >  1:6925122/1‑128 (MQ=255)
        gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattat                                                                                                                          <  1:5618988/128‑1 (MQ=255)
        gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattat                                                                                                                          <  2:3330856/128‑1 (MQ=255)
          gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattatta                                                                                                                        >  2:6279961/1‑128 (MQ=255)
           aagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattatta‑t                                                                                                                      >  1:9397181/1‑128 (MQ=255)
             gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattatta‑tta                                                                                                                    <  1:8630590/128‑1 (MQ=255)
             gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAgattattattatta‑taa                                                                                                                    >  2:5414477/1‑126 (MQ=255)
              aaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattatta‑ttat                                                                                                                   >  1:8204937/1‑128 (MQ=255)
                tGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAAtattattattatta‑ttatta                                                                                                                 <  2:3521337/128‑1 (MQ=255)
                      aaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCACCAATATTATTATTATTA‑TTATTattattt                                                                                                           >  1:6745263/1‑128 (MQ=255)
                        agagTAGGAGAGTAAAAATAAAAAAGTAAATAATTAATTTTATAAGCAAAACCTCTAGGTATTGCTTTTTTATAAATATACAAATTTTAAT‑CAGGAACAATATTATTATTATTT‑TTATTAttatttat                                                                                                         <  1:8991390/128‑1 (MQ=255)
                         gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATaataataataata‑atattgttgctgttt                                                                                                        <  1:2776897/128‑8 (MQ=38)
                         gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATc                                                                                                        >  2:8686708/1‑128 (MQ=255)
                           gTACGAGAGTTAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGATTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCaa                                                                                                      <  2:1755275/128‑1 (MQ=255)
                           gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCaa                                                                                                      >  2:9027827/1‑128 (MQ=255)
                           gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCaa                                                                                                      >  2:4709012/1‑128 (MQ=255)
                           gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTAAAGGTATTGCTTTTTTATAAAAATACAAATTATAAA‑CAGCAACAATATTATTATTATTA‑TTATTTTTAATTATCaa                                                                                                      >  1:6555742/1‑128 (MQ=255)
                           gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTATATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCaa                                                                                                      <  2:9402398/128‑1 (MQ=255)
                            tACGAGATTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAg                                                                                                     <  1:765801/128‑1 (MQ=255)
                            tACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAg                                                                                                     <  1:5803010/128‑1 (MQ=255)
                              cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATAATTATTATTA‑TTATTATTAATTATCATGCa                                                                                                   >  2:7721650/1‑128 (MQ=255)
                              agagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCa                                                                                                   <  1:10001625/127‑1 (MQ=255)
                               gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCat                                                                                                  <  2:2194017/128‑1 (MQ=255)
                               gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCat                                                                                                  >  2:7037424/1‑128 (MQ=255)
                               gagaGTAAAAATAAAAAAATAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCat                                                                                                  <  1:3441206/128‑1 (MQ=255)
                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCata                                                                                                 >  1:26275/1‑128 (MQ=255)
                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCat                                                                                                  >  1:1309416/1‑127 (MQ=255)
                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTAATAATTATCAATCata                                                                                                 >  1:1480413/1‑128 (MQ=255)
                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATattattattatta‑ttattatt                                                                                                               <  2:3918574/112‑1 (MQ=255)
                                          taaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTATAAA‑CAGCAACAATATAATTATTATTA‑TTATTATAAATTATCAAGCATATAAATTTAat                                                                                       >  2:5076149/1‑128 (MQ=255)
                                             aaaaCGTAATAAATAATTTTATAAGCAATACCAGAAAGGATTGGATTTTTAAAAAAAATCCAATTTTAAACCGGCACCAATATT‑TTTTTATTATTTATATTTAATTA‑GAATCATAATAATTTAatatt                                                                                    >  1:7850319/1‑127 (MQ=255)
                                              aaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTTTTAATTATCAAGCATATAAATTTAATATGa                                                                                   <  1:4706836/128‑1 (MQ=255)
                                              aaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGa                                                                                   <  2:849040/128‑1 (MQ=255)
                                               aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                                  <  1:8394530/128‑1 (MQ=255)
                                                aCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGata                                                                                 <  1:10230787/128‑1 (MQ=255)
                                                aCTAAATAAATAATTTTATAAGCAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGata                                                                                 <  1:4285082/128‑1 (MQ=255)
                                                    aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                             >  1:4862466/1‑128 (MQ=255)
                                                    aataaataATATTATAAGCAATACCTCAAGGTATTGATTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                             <  2:5580003/128‑1 (MQ=255)
                                                      taaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTa                                                                           >  1:8011680/1‑128 (MQ=255)
                                                         ataatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAttt                                                                        <  1:8794501/128‑1 (MQ=255)
                                                         ataatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAttt                                                                        <  2:7387950/128‑1 (MQ=255)
                                                           aatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGatagcaatgtcttc                                                                      >  2:8857816/1‑117 (MQ=255)
                                                           aatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTa                                                                      >  2:10133822/1‑128 (MQ=255)
                                                             ttttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTT‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAgg                                                                    <  1:9928706/128‑1 (MQ=255)
                                                             ttttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAgg                                                                    <  1:1621956/128‑1 (MQ=255)
                                                             ttttATAAGCAATACCTCAAGGTATTGCTTTTATATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCaa                                                                                                      >  2:5245465/1‑94 (MQ=255)
                                                               ttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTg                                                                  <  1:5230315/128‑1 (MQ=255)
                                                               ttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCAAATAAATATAATATTATATACATATTTTAGGTg                                                                  >  2:4531576/1‑128 (MQ=255)
                                                                 ataAGCAATACCTAAAGGTATTGCTTTTTTATAAAAATAGAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGag                                                                <  2:7547521/128‑2 (MQ=255)
                                                                  taAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAAt                                                                                            >  1:9735957/1‑99 (MQ=255)
                                                                    aGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTaa                                                             >  2:6465066/1‑128 (MQ=255)
                                                                     gtaatacagaaaGGTATTGCTTTTTTTTTAATATTAAAATTTTTAA‑ATTCAAAAATTTTATTTTTATTA‑TTATTATTAATTATAAAGCATATAAATTTTATATGATATAACTATTTTTGGTGATTaaa                                                            <  1:4453115/118‑1 (MQ=255)
                                                                      cAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTaaaa                                                           >  1:7302794/1‑128 (MQ=255)
                                                                         tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAAAATGCAAGACCTATGTTAGGTGATTATAATGa                                                        >  1:7085540/1‑128 (MQ=255)
                                                                         tACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        <  1:3279269/128‑1 (MQ=255)
                                                                           acTCAAGTTATAGCTTTTTTAAAAAAATACAAATTTTAAA‑CAGAAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaa                                                      <  2:6627114/127‑1 (MQ=255)
                                                                            cTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACATATTTTATGTGATTAAAATGaaaa                                                     >  2:7918504/1‑128 (MQ=255)
                                                                             tCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaaaa                                                    <  2:2975188/128‑1 (MQ=255)
                                                                               taGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                                  <  1:2040043/127‑1 (MQ=255)
                                                                                aGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGa                                                 >  2:582011/1‑128 (MQ=255)
                                                                                  gTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTATTTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATAAAAAACGAGt                                               >  2:9218380/1‑128 (MQ=255)
                                                                                   tATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCaa                                                                                                      >  2:2572883/1‑72 (MQ=255)
                                                                                   tATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATTATATACCTATTTTAGGTGATTATAATGAAAAACGAGtt                                              >  1:6368599/1‑128 (MQ=255)
                                                                                     ttGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGtttt                                            <  1:2256449/128‑1 (MQ=255)
                                                                                         ttttttATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAata                                        <  1:1817383/128‑1 (MQ=255)
                                                                                               ataAAAATTCAAATTTTAAA‑CAGCAACATTATTACTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGa                                  <  2:1951078/128‑1 (MQ=255)
                                                                                               ataAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGa                                  >  1:7472416/1‑128 (MQ=255)
                                                                                                taAAAATACAAATTTTAAA‑CAGCATCAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAt                                 <  2:7178952/128‑1 (MQ=255)
                                                                                                  aaaaTACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAttt                               <  1:5967404/128‑1 (MQ=255)
                                                                                                  aaaaTACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAttt                               <  2:6061877/128‑1 (MQ=255)
                                                                                                     aTACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                            <  1:3765349/128‑1 (MQ=255)
                                                                                                     aTACAAATTTTAAA‑CAGAAACAATATTATTATTATTA‑TTATTATTAATTATAAATCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                            <  2:9806512/128‑1 (MQ=255)
                                                                                                       aCAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaac                          >  1:4130945/1‑128 (MQ=255)
                                                                                                       aCAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTAACAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                           <  1:6162604/111‑1 (MQ=255)
                                                                                                         aaaTTTTAAA‑CATCAAAAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaacaa                        <  2:4101482/128‑1 (MQ=255)
                                                                                                            ttttAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAAcaacaa                     <  2:1169410/128‑1 (MQ=255)
                                                                                                             tttAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAg                    >  2:3731180/1‑128 (MQ=255)
                                                                                                             tttAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATAATCAAGCATATAAATTTAATATGATATACCTATTTTATGTGATTAAAATGAAAAACTAGTTTTAATATAAATATTTAAaacatctag                    >  2:2370840/1‑123 (MQ=255)
                                                                                                              ttAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGc                   <  2:10369628/128‑1 (MQ=255)
                                                                                                                aaa‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTg                 >  2:4878673/1‑128 (MQ=255)
                                                                                                                 aa‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGa                >  1:10365936/1‑128 (MQ=255)
                                                                                                                     aGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAAc             <  1:5424683/128‑1 (MQ=255)
                                                                                                                     aGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAAc             >  1:3586128/1‑128 (MQ=255)
                                                                                                                        agcaacaatattattatta‑ttattattaATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          <  1:3946572/120‑1 (MQ=255)
                                                                                                                        aacaaTATTATTATTATTA‑TTATTATTAATTATCAGGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          >  2:4341271/1‑128 (MQ=255)
                                                                                                                        aacaaTATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGATTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          >  1:9608890/1‑128 (MQ=255)
                                                                                                                        aacaaTATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAGCAAGCTGAAACtat          >  2:2737740/1‑128 (MQ=255)
                                                                                                                        aacaaTATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          <  1:3124772/128‑1 (MQ=255)
                                                                                                                        aacaaTATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          >  1:2428896/1‑128 (MQ=255)
                                                                                                                         acaaTATTATTATTATTA‑TTATTTTTAATTATCAAGGATATAAATTTAATATGATATAGCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtata         <  2:8078022/128‑1 (MQ=255)
                                                                                                                           aaTATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt       >  1:2936666/1‑128 (MQ=255)
                                                                                                                            atatTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAttt      <  1:5033487/128‑1 (MQ=255)
                                                                                                                                |                                                                                                                                
AAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAA‑CAGCAACAATATTATTATTATTA‑TTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTAAAC  >  CP016816/117819‑118073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.