New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 768913639 (0.750)635 (0.130) 151/252 21.6 14.5% intergenic (‑140/+45) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 76895 = 3843 (0.790)intergenic (‑144/+41) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 4472 total aligned reads displayed.

TTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTACTT  >  CP016816/76768‑77024
                                                                                                                                      |                                                                                                                                  
tatatataaaTTATTGAACATAATGATTTATAATAAAAAATAAAAAT‑AAATTTAAAACCAAAATTCCCCTTTAAATTTAAAT‑AACATTATATAAATATAAA‑TTTTTTAAA‑TAAAAATATT‑ACAA‑C‑ttt                                                                                                                                    <  2:4125580/126‑1 (MQ=255)
 ttATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑ATCATTATATAAAGATAAA‑TTTTTTAAT‑GAAAAATATT‑ACAA‑C‑tttt                                                                                                                                   >  1:7218134/1‑128 (MQ=255)
 ttATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTATTTAAA‑GAAAAATATT‑ACAA‑C‑tttt                                                                                                                                   >  2:4957331/1‑128 (MQ=255)
   atatatatTAGTGAACTTAAGGTTGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TAATTTAAA‑GAAAAATATA‑ACAA‑C‑ttttta                                                                                                                                 >  2:5708672/1‑127 (MQ=255)
    tatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑ttttttt                                                                                                                                >  2:9825597/1‑128 (MQ=255)
       atatTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACACCCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑CCAA‑A‑tatatttttt                                                                                                                             >  1:4557175/1‑128 (MQ=255)
       atatTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑tttttttttt                                                                                                                             >  1:10000149/1‑128 (MQ=255)
         atTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAT‑C‑tttttttttttt                                                                                                                           >  1:2180535/1‑128 (MQ=255)
           tAGTGAACTTTAGGATTAATAATAAAAAATAATAAT‑AACTTTACAACCAAAATTCCCCTTAAAATTAAAAT‑AAAATTATATAAATATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑tttttttttttttg                                                                                                                         <  1:9463861/128‑2 (MQ=255)
             gTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑tttttttttttttttt                                                                                                                       >  1:6359475/1‑128 (MQ=255)
                       tgATTTATAATAAAAATTAATAAT‑AACTGTAAAACCCAAATTTCCCTTTAAATTAAAAT‑AACATTATATAAATATAAA‑TTTTTTAAA‑TAAAAATATT‑ACAA‑C‑‑‑TTTTTTTTTTTTTTGGAACTAACata                                                                                                           <  1:1218821/127‑1 (MQ=255)
                       tgATGTAAAATAAAAATTAATAAT‑TACTAGTCAACCCCAATTCCCCTTTAAATTAAAAT‑AACATTATATAAATATAAA‑TTTTTTAAA‑GAAAAATTTT‑AAAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACat                                                                                                            <  1:10188207/127‑1 (MQ=255)
                       ggATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑tttttttttttttttgaaaaaaaaat                                                                                                             >  1:3010075/1‑117 (MQ=255)
                       ggATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTT‑‑GAAATAACata                                                                                                           >  1:4753234/1‑128 (MQ=255)
                       ggATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTAAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑A‑tattttttttttattttagaaaaaaa                                                                                                             >  2:8573767/1‑118 (MQ=255)
                        ggtttttaattaaaaTTAATTATAAAATGAAAAACCAAAATTCCCTTTTAATTTAAAAT‑AA‑ATTATATAAATAAAAA‑TTTTTTTAA‑TAAAAAAATT‑A‑AA‑A‑AATTTTTTTTTTTTTTGGAACTAACata                                                                                                           <  1:6781528/116‑1 (MQ=255)
                         atttttaataaAAATTAATAAA‑TACTTTTAAAACCAAAATACCCATTAAATTAAAAA‑AAAATTATATAAATTTAAA‑TTTTTTAAATAAAAAAAATA‑AAAA‑T‑TTTTTTTTTTTTTTTTGGAACTAACat                                                                                                            <  1:5545146/123‑1 (MQ=255)
                         aTGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAATATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACatat                                                                                                          <  2:8220417/128‑1 (MQ=255)
                           gTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTATTTGTTGAAAATaaaaatta                                                                                                         >  2:6851964/1‑122 (MQ=255)
                           gTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTATTTTTTTTTTTT‑GAAATAACAAATaa                                                                                                        >  2:2563422/1‑128 (MQ=255)
                           gTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTACCCTTTAAATTCAAAT‑AACATTAAATAAAGATAAA‑TAATATAAA‑GAAAAATATT‑ACAA‑C‑TTATTTTTTATTTTTTAGAACTAACAtata                                                                                                         >  2:3333397/1‑128 (MQ=255)
                              taataCAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAAATAACATATAAttt                                                                                                     >  1:1630047/1‑128 (MQ=255)
                                ataCAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAACTAACATATAAtttt                                                                                                    >  2:8927684/1‑128 (MQ=255)
                                ataCAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTT‑GAACTAACATATAATTTT‑a                                                                                                  >  1:8933258/1‑128 (MQ=255)
                                 taCAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTGAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTATTTATATTT‑AAAATAAAATAAAATTTT‑aa                                                                                                 >  2:2412457/1‑127 (MQ=255)
                                   aaaaTTAAAAAT‑AAATTTAAAAAACAAAATCACATTTAAATTTAAAT‑AAAATTATTTAAATATAAA‑TTTTTTAAA‑TTAAAATATT‑AAAA‑‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCaa                                                                                              <  1:6978488/127‑1 (MQ=255)
                                     aaTTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGTAAATAACATATAATTTT‑ACCAat                                                                                             >  2:1296832/1‑128 (MQ=255)
                                          ataat‑aaCTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTATTTTT‑TAAATAACATATAATTTT‑AACAattataa                                                                                        >  2:6268368/1‑126 (MQ=255)
                                           taat‑aaATTTAAAAAACAAATTAACCTTTAAATTAAATT‑TAAATTATTTAAATTTAAA‑TTTTTTTTA‑TAAAAATATT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAAttatta                                                                                        <  1:4024979/128‑1 (MQ=255)
                                            aaattacattaaaaCCCAAATTAACCTTTTAATTTAAAT‑AACAATTTATAAATTTAAA‑TTTTTTTAA‑TAAAAATTTT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAAttatta                                                                                        <  1:9266472/116‑1 (MQ=255)
                                            aaaaaaCTGTAAAACCCAAATTCACCTTTAAATTAAAAT‑AAAATTATATAAACATAAA‑TTTTTTAAA‑TAAAAATATT‑ACAA‑C‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGa                                                                                      <  2:2008545/124‑1 (MQ=255)
                                              t‑aaCTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGTAACTAACATATAATTTT‑ACCAAtaattaaat                                                                                     >  1:2393591/1‑125 (MQ=255)
                                              t‑aaCTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTT‑‑AAAATAA‑AAATAATTTTAACCAataattataatt                                                                                   >  2:1839590/1‑128 (MQ=255)
                                              aaaaCTTTAAAACCCAAATTACCCTTTAAATTAAAAT‑AAAATTAAAAAAATAAAAA‑TTTTTTAAA‑TAAAAATATT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGa                                                                                      <  1:529112/126‑1 (MQ=255)
                                                aaCTTTTCAACACAAAATACCCATTAAAATAAAATAAAAATTTTAT‑AACATAAA‑ATTTTTAAA‑AAAAAAAATT‑A‑AA‑A‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGaatt                                                                                   <  2:5111566/128‑1 (MQ=255)
                                                 aCTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTTGAAATAAAATAAAATTTT‑AAAAAttattatattt                                                                                   >  2:9640737/1‑123 (MQ=255)
                                                    ttaaaaaccAAAATCCAATTTTAATTTAAAA‑AAAATTATATAAATATAAA‑TTATTAAAA‑TAAAAAAATT‑AAAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGaatttcaa                                                                               <  2:10400264/121‑1 (MQ=255)
                                                     tACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGaatttcaat                                                                              <  2:6076531/128‑1 (MQ=255)
                                                      aCAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGTAAAAAAATTATAATTTT‑ACAAATAATTAAaatttcaat                                                                              >  1:336084/1‑128 (MQ=255)
                                                       aaaCCCAAATTACCCATTAAAATCAAAT‑AAAAATATATAAATATAAA‑TTTTTTAAA‑TAAAAAAATT‑AAAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGaatttcaattt                                                                            <  2:3900760/127‑1 (MQ=255)
                                                        aaCCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAACTAAAATATAATTTT‑ACAAATTATTAaaatttaaattt                                                                            >  2:6449902/1‑128 (MQ=255)
                                                           ccAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGAAACAAAAAAATAATTTA‑AAAAATTAATAGaatttaaatttaaaa                                                                        >  2:7520334/1‑124 (MQ=255)
                                                           ccAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTAGGAACTAACAAATAATTTA‑CCCAAATATTAGAATTACAATTTccca                                                                        >  1:8017989/1‑128 (MQ=255)
                                                           acAAATTACCAATTAAAATAAAAT‑AAAAATAAATAAACTTAAA‑TTTTTTTAA‑TTAAAAAATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTcaca                                                                        <  1:9640773/127‑1 (MQ=255)
                                                            cAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAATATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGa                                                                      <  1:2815153/128‑1 (MQ=255)
                                                            cAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTTTAACTAAAATATAATTTA‑AACAATAATTATAATTTAAATTTaaca                                                                        >  2:5907535/1‑128 (MQ=255)
                                                             aaaTTAACCTTTTAATTCAAAT‑AAAATTATATAAAGATAAA‑TTTTTTAAA‑TAAAAATATT‑AC‑A‑T‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGa                                                                      <  1:6571086/128‑1 (MQ=255)
                                                              aatattaatttAAATTAAAAT‑TAAATTATATAAATATTAA‑TTTTTTAAA‑TAAAAATATT‑ATAA‑T‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGa                                                                      <  1:4377406/120‑1 (MQ=255)
                                                              aaTTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGAAAATAAAAAATAATTTT‑AAAAATTATTTTaatttaaatttaaaata                                                                      >  2:452188/1‑122 (MQ=255)
                                                                  ccccTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTT‑ACCAATTATTATAattaaaatttcaaaaattaa                                                                  >  2:1015619/1‑120 (MQ=255)
                                                                        tAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTAAATTTAACAGATGAATTGAtat                                                           >  2:9429669/1‑126 (MQ=255)
                                                                        tAAATTAAAAT‑AAAATTATATAAATATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                          <  2:9229875/128‑1 (MQ=255)
                                                                         aaaTTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAACAAACATATAATTTT‑ACCAATTATTAAAATTTAAATTTCACAAATGAatttattt                                                           >  1:9808178/1‑128 (MQ=255)
                                                                           aatCAAAT‑AACATTAAATAAATCAAAA‑ATTTTTAAA‑TAAAAATATT‑A‑AA‑A‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                        <  1:9962648/126‑1 (MQ=255)
                                                                           aTTTAAAT‑TATATTATATTAATATAAA‑TTTTTTAAA‑TAAAAATATT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttct                                                         <  2:3725869/128‑1 (MQ=255)
                                                                           aTTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTT‑ACAAATTATTAGAATTTCAATTTCAAAGATGAAATGATttct                                                         >  2:4312847/1‑128 (MQ=255)
                                                                           aTTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATTTAATTTT‑AACAATTATTATAATTTCAATTTAACAGATTTATTGATtactt                                                        >  1:1983227/1‑128 (MQ=255)
                                                                           aTTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                        <  1:8753189/128‑1 (MQ=255)
                                                                            ttaaaaT‑AATATTATATAAATATAAT‑TTTTTATAA‑TATAAATATT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                        <  1:5122446/125‑1 (MQ=255)
                                                                             taaaaT‑ATAATTTTATAAATAAAAA‑TTTTTTAAA‑TAAAAATATT‑A‑AA‑A‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTtcttct                                                      <  1:3823887/126‑1 (MQ=255)
                                                                              cAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGTACCTAACATATATTTTT‑ACCAATTATTAGCATTTAAAATTAACAGATGAATTTAttaattaaa                                                     >  1:3184996/1‑121 (MQ=255)
                                                                                aattaaatttttataAATTTAAATTTTTTTATA‑TAAAAAT‑TT‑A‑AA‑A‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaa                                                    <  2:7329535/117‑1 (MQ=255)
                                                                                aaT‑AAAATTATATTAATATAAA‑TTTTTTAAA‑TTAAAATATT‑A‑AA‑A‑TTTTTTTTTTTTTTTTGGAACTAAATTATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                                   <  1:7469924/128‑1 (MQ=255)
                                                                                  aataaaTTATATAAATAAAAA‑TTTATTAAA‑TAAAAAAATT‑TAAT‑C‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                                   <  1:1109655/123‑1 (MQ=255)
                                                                                     aCATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGTAAATAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCAAAGATTAATTGTTTTCTTATAATAAtt                                               >  1:5747955/1‑128 (MQ=255)
                                                                                         tatataAATATAAA‑TTTTTTTAA‑TAAAAATATT‑ACAA‑C‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                         <  2:8744483/128‑1 (MQ=255)
                                                                                          atataAATTTAAA‑TTTTTTTAA‑GAAAAATATT‑A‑AA‑A‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                          <  1:1417209/128‑1 (MQ=255)
                                                                                            ttaAATATAAA‑TTTTTTAAA‑TAAAAATATT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                         <  2:9094618/127‑1 (MQ=255)
                                                                                            ataAAGATAAA‑TTTTTTTAA‑TCAAAATATT‑ACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                        <  1:8421839/128‑1 (MQ=255)
                                                                                             taAATATAAA‑TTTTTTAAA‑TAAAAATATT‑AAAA‑A‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                        <  2:2941595/128‑1 (MQ=255)
                                                                                             taAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGTAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTTATTTCTTATAATAATTTTTatat                                        >  1:2610842/1‑128 (MQ=255)
                                                                                              aaaGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑‑TTTTTTTTTTTTTTGGAACTAACATAAAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGATTTGATTTCTTCTAAAAATTTGTAtttata                                     >  1:10396316/1‑128 (MQ=255)
                                                                                               aaGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAAATAACATAAAATTTT‑AACAATTATTATAATTTCAATTTAACAGATGAATTTATTTATTATAATAATTTTTatatat                                      >  1:4207548/1‑128 (MQ=255)
                                                                                                atttAAA‑TTTTTTAAA‑TAAAAATTTTAATAATT‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtata                                       <  2:166235/125‑1 (MQ=255)
                                                                                                  aTAAA‑TTTTTTAAA‑TAAAAATATT‑ACAA‑‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                                 <  1:4935422/128‑1 (MQ=255)
                                                                                                     aa‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAAAATTTCAATTTCACAGATGATTTGATTTATTCTAATAATTTGTAAATATATATGtt                               >  1:8598136/1‑128 (MQ=255)
                                                                                                      aaatttttAAA‑GAAAAATATT‑A‑AA‑A‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtt                               <  1:1836072/125‑1 (MQ=255)
                                                                                                      a‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGttttt                            >  2:8024296/1‑128 (MQ=255)
                                                                                                        ttttttttA‑TAAAAATATT‑ATAA‑‑‑TTTTTTTTTTTTTTTTTGAACTATCATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGTATTGATTTCTTCTAATAATTTGTCTATATAGATGtttt                             <  1:6156993/128‑1 (MQ=255)
                                                                                                          ttttAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTT‑GAACTAACAATTAATTTT‑ACAAATTATTAAAATTTAAATTTAACAGATTAAGTTATTTATTTATATAATTTTTATAAATAAAtttttttt                           >  2:2198991/1‑128 (MQ=255)
                                                                                                            ttAAA‑GAAAAATATT‑ACAA‑C‑‑‑TTTATTTTTTTTTTGGAAAAAAAAAAAAATTTT‑ACAAATTATAATATTTTAAATTTCACAGATTAATTGATATCTTCAAATAATTTTTGTATATAGTTTTTTTTtata                        >  2:5280873/1‑128 (MQ=255)
                                                                                                             tAAA‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTT‑ACCAATTATTAGAATTTCAATTTAACATATGAATTGATTTCTTATAATAATTTGTATATATATATGTTTTTtata                        >  2:1486107/1‑128 (MQ=255)
                                                                                                              taa‑GAAAAATATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTatat                       <  2:4717035/127‑1 (MQ=255)
                                                                                                                   aaaaaTATT‑ACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaa                   <  1:8192956/128‑1 (MQ=255)
                                                                                                                    aaaaTATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACAAATTATTATAATTTAAATTTCAAATATGAATTGATTTCTTATAATAATTTTTCTATATAGATTTTTTTTATATATaaa                  >  1:3520697/1‑128 (MQ=255)
                                                                                                                    aaaaTATT‑AAAA‑C‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCTCAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaa                   <  1:3652186/128‑1 (MQ=255)
                                                                                                                    aaaaTATT‑A‑AA‑A‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa                  <  2:2765260/128‑1 (MQ=255)
                                                                                                                      aaTATT‑ACAA‑CTTTTTTTTTTTTTTTTTGGAACTAAAATATAATTTT‑ACCAATTTTTATAATTAAAATTTAACAAAAAAATTGATTTATTATAATAATTTTAATTTATATATTTTTTTTATATTTaaa                  >  1:9104789/1‑128 (MQ=255)
                                                                                                                      aaTATT‑ACAA‑C‑TTTTTTTTTTTTTTTT‑‑AACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTTATTTATTCTAATAATTTTTATATATACATTTTTTTTATATCTAAAACa               >  2:7713119/1‑128 (MQ=255)
                                                                                                                      aaTATT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTATATATAGATGTTTTTTATATCTAAATc                >  2:3531969/1‑128 (MQ=255)
                                                                                                                       atatT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGATTTTAAATTTAACAGATGAATTTATTTATTCTAATAATTTTTATATATATATGTTTTTTATATATAAATCa               >  2:7064160/1‑128 (MQ=255)
                                                                                                                         atT‑ACAA‑C‑‑TTTTTTTTTTTTTTTGGAAAAAACAAATAATTTT‑ACCAATTTTTAGAATTTCAATTTCACAGATGAATTGATTTATTATAATAATTTTTATAAATTGAGTTTTTTTATATATAAATAAGt             >  1:5973382/1‑128 (MQ=255)
                                                                                                                           t‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTg            <  2:1140457/128‑1 (MQ=255)
                                                                                                                            atttaaaattttttttttttttttGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAg              <  1:786749/120‑1 (MQ=255)
                                                                                                                                 aaattttttttttttttttGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATc         <  2:3188205/125‑1 (MQ=255)
                                                                                                                                  aactttttttttttttttGGAAATAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACATATAAATTGATTTATTATAATAATTTGTATATATATATGTTTTTTATTTATAAATAAGTGATct        >  2:786351/4‑128 (MQ=255)
                                                                                                                                   aaattttttttttttttGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATctt       <  2:8386622/125‑1 (MQ=255)
                                                                                                                                    atttttttttttttttGGAACTAACATATAATTTT‑ACAAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATcttt      <  1:7693573/127‑1 (MQ=255)
                                                                                                                                     tttttttttttttttGGAACTAACATATAATTTT‑ACAAATTATTAGAATTTAAATTTCACATATGAATTGATTTCTTAAAATAATTTTTCTATATAGATGTTTTTTATATATAAATCAGTTATcttta     >  2:548005/1‑128 (MQ=255)
                                                                                                                                      ttttttttttttttGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACATATTAATTGATTTCTTATAATAATTTGTCTATATAGATGTTTTTTTTATCTAAATCAGTGATctttag    >  2:6649432/1‑127 (MQ=255)
                                                                                                                                      |                                                                                                                                  
TTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAAT‑AACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑AACATTATATAAAGATAAA‑TTTTTTAAA‑GAAAAATATT‑ACAA‑C‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTT‑ACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTACTT  >  CP016816/76768‑77024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.