New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =3953 (0.820)538 (0.120) 161/226 16.0 13.7% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 3247 (0.750)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 4186 total aligned reads displayed.

AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76764‑77019
                                                                                                                                 |                                                                                                                                
    tttATATATATTAGTGAAATTTATGATGTATAATACAAATTAAT‑AAAAACTGTACAACCCAAATTCCCCTTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑ttt                                                                                                                              <  1:5355382/128‑1 (MQ=255)
    tatatataaaTTATTGAACATAATGATTTATAATAAAAAATAAA‑AATAAATTTAAAACCAAAATTCCCCTTTAAATTTAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑ttt                                                                                                                              <  2:4125580/126‑1 (MQ=255)
      tatatataTCAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttt                                                                                                                            >  1:7228633/1‑128 (MQ=255)
         atatatTAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttt                                                                                                                         >  1:981004/1‑128 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttt                                                                                                                       >  1:10000149/1‑128 (MQ=255)
            tatTAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttttttttt                                                                                                                      >  2:7080832/1‑128 (MQ=255)
               tAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttttt                                                                                                                   >  2:4524655/1‑128 (MQ=255)
                atttaaCTTAATTATTTATAATAAAAATTAAT‑AAAAACTTTACAACCCAAATTCCCCTTTAAATTCAAAAAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAAAAA‑ttttttttttttttt                                                                                                                  <  1:1625831/124‑1 (MQ=255)
                  ttaaCTTAACGATGTATAATACCAATTAAT‑AATAAATTTACAAACCATATTCCCCTTTAAAATCAAATAACATTTAATAAAGATAAATTTTTTAAACAAAAATATTACAAC‑TTTTTTTTTTTTTTTTg                                                                                                                <  2:983289/126‑1 (MQ=255)
                       atAACGATGTAAAATACAAATATAA‑AATAACTTTACCACCCAAATTCCCCTTAAAATTCAAATAACATTTTATAAACAAAAATTTTTTAAATAAAAATAATACAAC‑‑ATTTTTTTTTTTTTTGGAACTa                                                                                                          <  2:6858310/127‑1 (MQ=255)
                        tAATGATTTATAAAAAAAATTAAT‑AATAAATGTAAAAACCAAATTCCCCTTTAAATTAAAAAAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTaa                                                                                                         <  1:442023/128‑1 (MQ=255)
                         aaGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttttttttttttttttttaaat                                                                                                         >  2:8221683/1‑120 (MQ=255)
                           ggATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttttttgaaaaaaaaat                                                                                                       >  1:3010075/1‑117 (MQ=255)
                           ggATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAACat                                                                                                      >  1:7699185/1‑128 (MQ=255)
                              tGTTTAATACAAATTTAT‑AATATATTTACAACCCAAATTACCCATTAAATTTAAAAAAAATTATATAAAGATAAATTTTTTAAATAAAAATTTTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACAtata                                                                                                   <  1:6577175/128‑1 (MQ=255)
                              tGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAAtata                                                                                                   >  2:319366/1‑128 (MQ=255)
                                  taataCAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGATATAACATATAAttt                                                                                               >  1:7482539/1‑128 (MQ=255)
                                  taataCAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAttt                                                                                               >  2:7875359/1‑128 (MQ=255)
                                    ataCAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAACTAACATATAATTTTa                                                                                             >  1:8933258/1‑128 (MQ=255)
                                     taCAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑AAAATAAAATAAAATTTAAc                                                                                            >  2:1846070/1‑128 (MQ=255)
                                     taCAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTATTTTTTTTTT‑TAAATAACATAAAATTTTAc                                                                                            >  1:6179170/1‑128 (MQ=255)
                                     aaaaaaTTAATAAAAAAATTTACAAACAAAATACCCTTTTAATTTAAAATAA‑ATTTTATAAATATTAATTTTTTTAATAAAAATAATAAAA‑‑‑AATTTTTTTTTTTTTGGAACTAACATATAATTTTAcc                                                                                           <  1:4250380/125‑1 (MQ=255)
                                       cAAAATAAT‑AATAACATTACAAACCAAATTCACCATTTAATTTAAATAAAATTATATAAAGATAAATTTTTTAAATAAAAAAATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCaa                                                                                         <  2:4938250/128‑1 (MQ=255)
                                        aaaTTAAT‑AATAAATGTAAAACCAAAATTCCACTTTAAATTAAAATAACATTATATAAATATAAATTTTTTAAAGAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCaa                                                                                         <  1:10166273/128‑1 (MQ=255)
                                         aaTTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAATAACATATAATTTTACCAat                                                                                        >  2:1296832/1‑128 (MQ=255)
                                         aaTTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTATTTTTTTTTTTGTAAAAAAAATATAATTTTaaatat                                                                                        >  2:6668412/1‑123 (MQ=255)
                                         aaTTAAA‑AATAACTGTAAAAACCAAATTCCCATTTAAAATCAAATAAAAATTTATAAATATAAATTTTTTAAATAAAAATATTAAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCaa                                                                                         <  2:9636386/128‑1 (MQ=255)
                                           ttAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAAAATTTAATTTTACCAatta                                                                                      >  1:5791145/1‑128 (MQ=255)
                                            taat‑aataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAattat                                                                                     >  2:8588871/1‑128 (MQ=255)
                                              at‑aataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAATATAATTTTACCAAttttta                                                                                   >  2:10409203/1‑128 (MQ=255)
                                              at‑aataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAATAACAAAAAATTTTACCAAttatta                                                                                   >  1:1833108/1‑128 (MQ=255)
                                              at‑aataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                   >  1:8591938/1‑128 (MQ=255)
                                               t‑aataaATTTAAAAACCAAATTAACATTTAAATTTAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAg                                                                                  <  1:121799/128‑1 (MQ=255)
                                                aaaaaatttaacaaacaaAATTCCCTTTTAAATTCAAATAAAATATAAAAAATAAAAATTTTTTAAATAAAAAAATTAAAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                 <  1:9460261/118‑1 (MQ=255)
                                                  ataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAACATATAATTTTACAAATTATTAGaa                                                                                >  2:6289640/1‑128 (MQ=255)
                                                   taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAAtaattaaat                                                                                >  1:2393591/1‑125 (MQ=255)
                                                    aaatttaaaaaccAAATTGCCATTTTAATTCAAATAACATTAATAAAATATAAATTTTATAAATAAAAAAATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatt                                                                              <  2:10196472/117‑1 (MQ=255)
                                                    aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAC‑TTTTTTTTTTATTTTT‑TAAATAAAAAATAATTTTAAAATTTATAATaatt                                                                              >  2:3907225/1‑128 (MQ=255)
                                                    aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTGTTTTTTTTGGATATTACATATAATTTTACAAATTATTAAaatt                                                                              >  1:4987881/1‑128 (MQ=255)
                                                    aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTTGAAATAAAATATAATTTTACAAATTATTATaat                                                                               >  2:2394803/1‑128 (MQ=255)
                                                       tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAAAATATATTTTTAAAAattatataaattta                                                                            >  2:2011830/1‑119 (MQ=255)
                                                       tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATAAAATTTTACCAATAATTAGaatttaa                                                                           >  2:7324329/1‑126 (MQ=255)
                                                         tACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAAAATATAATTTTACCAATTATAAGaatttcaat                                                                         >  2:430719/1‑128 (MQ=255)
                                                         tACAACACAATTTGCACTTTAATTTAAAATAACATTAAATAAAGATAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                         <  1:4595001/128‑1 (MQ=255)
                                                         tACAAACAAAATTAACCTTTAATATAAAATAACATTAAATAAATATAAATTTTTTAAATAAAAATAATA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                         <  1:6786461/128‑1 (MQ=255)
                                                            aaCCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAAATAAAATATAAATTAACCAATAAATATaatttaaatta                                                                       >  1:3527862/1‑127 (MQ=255)
                                                               ccATATTTCCCATTAAATTAAAATAAAAATATATAAATATAAAATTTTTTAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTcaca                                                                   <  1:2185589/128‑1 (MQ=255)
                                                                cAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACAAAAATATATTTTAAACAATTATTAGAAATTCAATTTCACAgc                                                                 >  1:998621/1‑127 (MQ=255)
                                                                cAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAAATAAAAATAAATTTAAACAATTATTAAAATTTCAATTTACCAGa                                                                 >  2:9218820/1‑128 (MQ=255)
                                                                  aattaaaaattaaatttaaatAAAATTTTTTAAATATAAAATTTTTAAATTAAAA‑ATTTAAAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                <  2:2767295/119‑1 (MQ=255)
                                                                  aataacacTTTAAATTAAAATTACAATAAATAAATATTAATTTTTTAAATATAAAAATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                <  2:2944667/121‑1 (MQ=255)
                                                                   aTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                               <  1:6377827/128‑1 (MQ=255)
                                                                   aTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACAAACATATATTTTTACAAATTATTAGAATTTCAATTTCACatata                                                               >  1:8023961/1‑127 (MQ=255)
                                                                     tCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTAT‑TAAAAAACATAAAAATTTAACATATATAATATATTCAATTTAACATATaaa                                                             >  2:6108142/1‑128 (MQ=255)
                                                                         atttAAATTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                         <  2:8926144/127‑1 (MQ=255)
                                                                          tttaatttaaATAAAAATTTTATTAATATAAATTTTTTTAAAAAAAAAAATAACAC‑‑TTTTTTTTTTTTTTTGTATCAAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGATTTGAt                                                        <  1:3884386/128‑1 (MQ=255)
                                                                            tataTTAAAATAAAATTAAATAAATTTAAATTTTTTAAATTAAAATATTTAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                       <  1:4065774/125‑1 (MQ=255)
                                                                            taatatCAAAAAAATTTATATAAATATAATTTTTTTAAAGATAAATATTACTAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATTAATTGTTttc                                                     <  2:2563102/123‑1 (MQ=255)
                                                                            tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAACTAACATAAAATTTTACAAATTATTAGAATTTCAATTACACATATgaattgaatt                                                      >  1:1408421/1‑128 (MQ=255)
                                                                             aaaataaaaTAAAATTATATAAAATTAAATTTTTTAAATAAAAAAATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:1664579/122‑1 (MQ=255)
                                                                             aaaTTTAAATTAAATTATTTAAATAAAAATTTTTTAAATAAAAATATTTCAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:2193850/128‑1 (MQ=255)
                                                                             aaaTTTAAATAATATTTTTTTAATTTAAATTTTTTTAATAAAAATATT‑TAAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  1:8209123/128‑1 (MQ=255)
                                                                             aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTTTAAAAAAAATATAATTTTAACAATTATTATAAATAAAATTTAAAATATTAATTGAttt                                                      >  1:3367145/1‑128 (MQ=255)
                                                                             aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAAAAAAATATAATTTTAACAATTAATAAAATTTAAATTTAACATATTAatttatttt                                                     >  2:7704653/1‑127 (MQ=255)
                                                                             aaaTTAAAATATAATTATATAAATATAAATTTTTTAAATAAAAATATTA‑AAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  1:2615691/128‑1 (MQ=255)
                                                                              aataaaaaTAACATTATATAAATTTAAATTTTTTAAATAAAAATATTACAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  1:3189862/123‑1 (MQ=255)
                                                                              aaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTATAATTTCAATTTCAAAGATGAATTGATttct                                                    >  2:5916413/1‑128 (MQ=255)
                                                                               aTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                   <  1:8753189/128‑1 (MQ=255)
                                                                                    aaTAAAATTATATTAATTTTAATTTTTTTAATTAAAATTTTTAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaa                                               <  1:3675774/128‑1 (MQ=255)
                                                                                     aataaaTTATATAAATAAAAATTTATTAAATAAAAAAATTTAATC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                              <  1:1109655/123‑1 (MQ=255)
                                                                                      tAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGCTTATTTTATTACTTATaataat                                           >  1:5178927/1‑128 (MQ=255)
                                                                                       aaCATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGAAACTAACATATAATTTTAAAAATTTTTAGAATTTAAATTACAAAAATGAATTTTTTTATTAtaataa                                            >  1:478220/1‑128 (MQ=255)
                                                                                       aaCATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGTAACTAAAATATAATTTTAACAATTATTAGAATTTAAATTTAACAGATTAATTTATTAATTAAaataata                                          >  2:8040197/1‑127 (MQ=255)
                                                                                        aCATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTTGAAAAAAAAAAAAATTTTACAAATAATTATAATTTAAATTTAAAAAATTAatttatttataataaaaat                                           >  1:2805179/1‑117 (MQ=255)
                                                                                        aCATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAATAAAATTTTACAAATTATTATAATTTAAATTTCACATATTAATTTATTTCTTCTAATAAtt                                          >  1:9259078/1‑128 (MQ=255)
                                                                                             atataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑AAACTAAAAAAAAATTTTACAAATTATAATAATTTCAATTAAAAAAATTAATTAATTAATTATAATAAtttttat                                     >  1:9627505/1‑124 (MQ=255)
                                                                                              tttaAATATAAATTTTTTTAATAAAAATATTAAAAC‑TTTTTTTTTTTTTTTT‑GAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                    <  2:472450/126‑1 (MQ=255)
                                                                                              tattattaTAATTTTTTTTAATAAAAATATTAAAAA‑TTTTTTTTTTTTTTTTGTAACTAACATATAATTTTTCCTATTATTAGAATTTCAATTTCACATATGAATTGATTTCTTCTAATAATTTGTCt                                     <  2:5709278/121‑1 (MQ=255)
                                                                                              tataaatataaaTTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                    <  2:334019/128‑1 (MQ=255)
                                                                                              tataAAGATATATTTTTTAAATAAAAATATTACTAC‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                    <  1:9105893/128‑1 (MQ=255)
                                                                                                tatatattaaTTTTTTAAATAAAATAATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAAAATATAATTTTAGCTATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                   <  1:788716/120‑1 (MQ=255)
                                                                                                ataatattaaTTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtata                                  <  2:3730731/120‑1 (MQ=255)
                                                                                                 aaaGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATAAAATTTTACCAATTATTAGAATTTCAATTTCACAGATGATTTGATTTCTTCTAAAAATTTGTAtttata                                >  1:10396316/1‑128 (MQ=255)
                                                                                                   aGATAAATTTTTTAAATAAAAATATTAAAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                              <  2:8746594/128‑1 (MQ=255)
                                                                                                     aTAAATTTTTTAAATAAAAATTTTTCAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGAt                             <  1:5610102/128‑1 (MQ=255)
                                                                                                     aTAAATTTTTTAAATAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGTATATAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGAt                             <  2:9433549/128‑1 (MQ=255)
                                                                                                      tAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGAAAATAAAATATAATTTTACAAATTATTAAAATTAAAATTTAAAAAATTAATTTATTTATTATAATAATTTTTAAATATAAAtt                            >  2:5114855/1‑127 (MQ=255)
                                                                                                            ttttAAATTATAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                      <  2:8440567/128‑1 (MQ=255)
                                                                                                            ttttAAATAAAAATATTTAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGttttt                       <  2:5282510/128‑1 (MQ=255)
                                                                                                               tAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTAACATATGAATTGATTTCTTATAATAATTTGTATATATATATGTTTTTtata                   >  2:1486107/1‑128 (MQ=255)
                                                                                                                 aaGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTAAATTTAAAAGATGAATTGATTTATTATAATAATTTGTCTATATATATGTTTTTTttata                 >  2:7518652/1‑127 (MQ=255)
                                                                                                                     aaaaTATTATAAT‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaa              <  1:1993650/128‑1 (MQ=255)
                                                                                                                     aaaaTATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAAAATAAAATTTTACCAATTATTAGAATTTAATTTTAAAAGATTAATTGTTTTGTTTAAATAATTTGTCTATATATATGTTTTTATTATATaa              >  2:5481476/1‑128 (MQ=255)
                                                                                                                       aaTATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATTTTTTTACCAATTTTTATAATTTCAATTTCACAGATGTATTGATTTATTATAATAATTTTTATATATTAATTTTTTTTTTATATAAAta           >  1:5982124/1‑127 (MQ=255)
                                                                                                                        atatTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATATAATTTTACAAATTATTAGAATTTCAATTTCACAGATTATTTGATTTCTACTAATATTTTTTATATTTTTATGTTTTTTATATATAAAtaa          >  1:7000703/1‑126 (MQ=255)
                                                                                                                        atatTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGATTTTCAATTTCACAGATGATTTGATTTATTCTAATAATTTGTATATATAGATTTTTTTTATATCTAAATCAg         >  2:6458295/1‑128 (MQ=255)
                                                                                                                         tatTACAACTTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc           <  2:9091743/128‑1 (MQ=255)
                                                                                                                           ttACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATAAAATTTTACCAATTATTTGAATTTAAATTTAACAGATGAATTGATTTCTTCAAATAATTTGTCTAAATAGATGTTTATTAAATCATAAGCAGTg       >  1:8439640/1‑128 (MQ=255)
                                                                                                                            tACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTg       <  2:1140457/128‑1 (MQ=255)
                                                                                                                                aC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTATATATAGATGTTTTTTATATCTAAATCAGTGATct   >  2:3542090/1‑128 (MQ=255)
                                                                                                                                 |                                                                                                                                
AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAAT‑AATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76764‑77019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.