New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =918 (0.620)81 (0.070) 48/204 18.0 10.2% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 682 (0.570)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1002 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTA  >  CP016816/437758‑438014
                                                                                                                                     |                                                                                                                                   
 ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatat                                                                                                                                    >  1:766597/1‑128 (MQ=255)
 ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatat                                                                                                                                    >  2:2694757/1‑128 (MQ=255)
  tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatata                                                                                                                                   >  2:899296/1‑128 (MQ=255)
    tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                                 >  1:3015003/1‑128 (MQ=255)
     ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatat                                                                                                                                <  1:443387/128‑1 (MQ=255)
       ctacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatat                                                                                                                              >  2:2787540/10‑128 (MQ=255)
        tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatata                                                                                                                             >  1:2659346/1‑128 (MQ=255)
        tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatata                                                                                                                             >  2:2608812/1‑128 (MQ=255)
          tatttGTAAGTTGAATTTTTAATAAATATTATATATAAAAATTGTATATTTAAAATAAATATTTTAGTATATGAATCACAGCAAAAACCACTATATTACCTATAGAGTTATT‑‑G‑‑‑‑atatatatatatata                                                                                                                           <  2:2233820/125‑1 (MQ=255)
                atatttttATTTTTAATAAATAATATAAAAAAAAATTTTTTTTTTAATAAATATATTTTATTAATTTACTAAAAGAAAAAATCTATATAAAAAATATAGATTTATT‑‑T‑‑‑‑atatatatatatatatatata                                                                                                                     <  1:3183183/124‑1 (MQ=255)
                 aaGTTTCATTTTTAATAAATATTAGAAATAAATATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAACCAAAAAACTACATATTACCTATAGAGTTAAA‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                                    <  2:862162/128‑1 (MQ=255)
                   gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat‑‑at                                                                                                                >  1:2746762/1‑128 (MQ=255)
                   gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat‑‑at                                                                                                                >  2:1387588/1‑128 (MQ=255)
                    tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat‑‑ata                                                                                                               >  1:3088369/1‑128 (MQ=255)
                    attttttttttATATATATTATAAATAAATATTTTTTTTTTAAAATATATATTTTTTTTAATCACTCAAAAATAAAAAAACCATATAATATATATAGTTAAT‑‑T‑‑‑‑atatatatatatatatatatat‑‑ata                                                                                                               <  1:2241889/123‑1 (MQ=255)
                     tttaTTTTTAAAATATATTTTATATAAAAATTTTATTTTTAAAATAAATATATTTTTATAATAATATAACAAAAAACCTCTATATTAAATATATAGATATT‑‑T‑‑‑‑ttatatatatatatatatatat‑‑atat                                                                                                              <  1:614254/125‑1 (MQ=255)
                      ttatttttttaaaataTTTTATATATAAATTTTTTTTTTTAAAAAAATATTTTTTTATATTATTAAAATATAAAAAATCTATATTAAATATATAGTTAAT‑‑t‑‑‑‑atatatatatatatatatatat‑‑atata                                                                                                             <  1:1001122/117‑1 (MQ=255)
                        aTTTTTAATAAATATTAGAAATAAAAAATTTATATATAAAATAAATATTTTATGTAATTAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATg                                                                                                           <  2:2428572/128‑1 (MQ=255)
                          ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat‑‑atatgcaag                                                                                                         <  2:1347600/128‑6 (MQ=255)
                           tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat‑‑atatatatat                                                                                                        >  2:1006474/1‑124 (MQ=255)
                            ttAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAg                                                                                                       <  2:1873618/128‑1 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATATATATTTTAGGAAATGTAGAAAAGAAAAAACCTCAATATTACCTATAGAGTTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATAT‑‑ATATATGCAAGCGAt                                                                                                   <  1:2785681/128‑1 (MQ=255)
                                taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATAT‑‑ATATATGCTAGCGATCa                                                                                                 >  2:2994705/1‑128 (MQ=255)
                                  aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAAAGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGAt                                                                                                   <  2:1295276/128‑1 (MQ=255)
                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                      >  2:44765/1‑107 (MQ=255)
                                     atTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAAAGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCa                                                                                              <  1:175512/128‑1 (MQ=255)
                                        ataaaTAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAATAAAAAACATCCTTATTAACTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATaa                                                                                           <  1:1266997/126‑1 (MQ=255)
                                         taaaTAAAATTTTTATTTTTAAAATAAATATTTTAGTTAATGAAGAAAATAAAAAACATCCATATTAACTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATaaa                                                                                          <  1:2470058/127‑1 (MQ=255)
                                          ataTAAAAATTTTTTTTTTATAATAAATATATTTTTATATTAATCAAAGAAAAAAACTCAATATTAAATATATAGTTAATTAT‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATaa                                                                                           <  1:217919/126‑1 (MQ=255)
                                          aaaTATAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATAAAAGAAAAAACATCAATATTAACTATAGAGTTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATg                                                                                       <  1:1218016/128‑1 (MQ=255)
                                          aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATaaaa                                                                                         <  1:543357/128‑1 (MQ=255)
                                           aaaaaaaaTTGTCTTTATAAAATAAATATTTTACGAAATGACCCACACCAAAAACCACCATATAACCTATAGAGATAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATaaa                                                                                          <  1:721785/125‑1 (MQ=255)
                                           aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATTCAAGCTATAAGCATAAAAt                                                                                        >  1:2429243/1‑128 (MQ=255)
                                           aaTAAAAATTGTATATTTAAAATAAATATTTTATGATATGAATAAAATAAAAAACCTCCATATTAACTATAGAGTTAAT‑‑GATATATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATa                                                                                            <  2:2280459/128‑1 (MQ=255)
                                             tAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATTAATAAAATCAAAAAAATCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATgg                                                                                      <  2:1512000/128‑1 (MQ=255)
                                              aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATCAAAGCTATCAGCATAAAATCGt                                                                                     >  1:94794/1‑128 (MQ=255)
                                               aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑CTATATGCTAGCGATCAGCATAAAATGGTGaatt                                                                                >  2:625902/1‑126 (MQ=255)
                                                 aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGAATAAAATCGTGaa                                                                                  >  1:402899/1‑128 (MQ=255)
                                                  aTTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGa                                                                                   <  2:1735894/128‑1 (MQ=255)
                                                  aTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAACACCTCCATATTACCTATAGAGTTAAT‑‑C‑‑‑‑ATATATATATATATAAATATAT‑‑ATATATTCGAGCGATGAGCTAAAGATAGTGata                                                                                 >  1:1400064/1‑126 (MQ=255)
                                                  aTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGaaa                                                                                 <  1:1099449/128‑1 (MQ=255)
                                                    tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCTAGCTATCATAATAAACTAGTGATAtt                                                                               >  1:565195/1‑128 (MQ=255)
                                                    tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATTGTGAAATTTa                                                                             >  2:579042/1‑128 (MQ=255)
                                                    tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAATATGGTGAAATTTAGa                                                                           >  2:254968/1‑128 (MQ=255)
                                                     gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATTCAAGCGATCAGCATAAAATGGTGAAAttt                                                                              >  2:2829519/1‑128 (MQ=255)
                                                         ttttAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATTCTATCGATCAAAATAAAATGTTGAAATTTatat                                                                          >  1:1639464/1‑128 (MQ=255)
                                                           ttAAAATATATATTTTATTAATTTATTCATATAAAAAACATAAATATTATTTATAGAGTTTAT‑‑‑‑‑‑‑‑TATATATATATATATATATAT‑‑ATATATGAAAGAGATAAGCATAAAATGGTGAAATTTAGATCTGa                                                                      <  1:1027196/128‑1 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAATACCTCCATATTACCTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATAAATATAT‑‑ATATATTCAAGCTATAAGAATAAAATGTAGATATTTATATCTg                                                                       >  2:145320/1‑128 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                       >  2:314541/1‑128 (MQ=255)
                                                             aaaaTAAATATTTTATGAAATGAAGAAAATCTAAAACCTCTATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                        <  2:106280/128‑1 (MQ=255)
                                                               aataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGt                                                                    >  2:794548/1‑128 (MQ=255)
                                                                   aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGAAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGt                                                                >  1:1812312/1‑128 (MQ=255)
                                                                   aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATAT‑‑ATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                              >  1:1486923/1‑128 (MQ=255)
                                                                   aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                          <  1:1566561/128‑1 (MQ=255)
                                                                    atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTTAGTTGGTc                                                               >  1:1857866/1‑128 (MQ=255)
                                                                       ttttATGAAATTATGCAAATAAAAAACATCTATATTAACTATAGAGATAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                              <  1:2883268/128‑1 (MQ=255)
                                                                       ttttAGTAAATGAAGCAAAGCAAAAACCACAATATAACATATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                              <  1:1364159/128‑1 (MQ=255)
                                                                          tattaaaTCAATCAAAGAAAAAAACTACATATAAACTATAGAGTTAAA‑‑G‑‑‑‑TTATATATATATATATATAAAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt                                                         <  1:2018560/124‑1 (MQ=255)
                                                                          tAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATATAAT‑‑G‑‑‑‑ATATATATATATATATATATATAAATATATGAAAGAGATCATCAAAAAATTCTGAAATTTAGATCTGAGGTTGTCTTaa                                                           >  2:1662783/1‑128 (MQ=255)
                                                                                 tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGttttt                                              >  2:3042157/1‑128 (MQ=255)
                                                                                  gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTTGTCTTATATTTGTAttt                                                 >  1:668946/1‑128 (MQ=255)
                                                                                      caaagcaaaAACCTCCATATTATCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTGGATCTGAGTTGTTCTTATATTTGTAGatttat                                             >  2:309450/1‑126 (MQ=255)
                                                                                      caaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGAGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTTGTCTTAAATTTTTAGTTttta                                             >  1:17143/1‑128 (MQ=255)
                                                                                       aaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGAATAAAATTGTGAAATTTAGATCAGATTTTGTCTTATATTTGTAGTTtttat                                            >  2:1587739/1‑128 (MQ=255)
                                                                                        aatcaaaAACATCTATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                           <  2:2657995/125‑1 (MQ=255)
                                                                                          gcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGt                                     >  2:1121417/1‑128 (MQ=255)
                                                                                          gcaaaAAACTCCATATTCTCTATAGAGTTATT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                         <  2:1831912/128‑1 (MQ=255)
                                                                                           caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                        >  1:2508599/1‑128 (MQ=255)
                                                                                           caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATAAAAGCGATCTGAATAAAATGGTGATATATATATCTCTGATTGTCTTAAATATTTTGATtttattttt                                        >  1:2358987/1‑126 (MQ=255)
                                                                                                 ccTCCATATTACCTATTGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCTTAAATTGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTGATTTATAGTTta                                  >  1:2724414/1‑128 (MQ=255)
                                                                                                 ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGTTTTTATTTATAGTTta                                  >  2:3200995/1‑128 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATTCAAGCGATCAGCATAAAATGGTGAAATATAGATCTGAGTTGGTATTAAATTTGTAGTTTTTATTTATATTTtat                                 >  2:2044564/1‑128 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTTTTTATAGTTTATaa                               >  1:831296/1‑128 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGTTGAAATTTATATCTGAGTTTGTCTTAAATTTTTTGTTTTTATTTATAGTTTATATAg                             >  2:2344827/1‑128 (MQ=255)
                                                                                                  atacagataaCCAATATAGATCAT‑‑T‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                                 <  1:2101486/119‑1 (MQ=38)
                                                                                                  atCCATAATAACAATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                                 <  1:2819813/127‑1 (MQ=255)
                                                                                                   tCCATATTAGATTTAGAGTTATT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATAAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                                <  2:2112340/128‑1 (MQ=255)
                                                                                                   tCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATTCAAGAGATCATCATAAAATTGTGAAATATATATCTCATTTAGTATTAAAATTATATTTTTTATATATAGTTtata                                >  2:675576/1‑128 (MQ=255)
                                                                                                   tCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATAAAAAATAGAAAAACATAAAATTGTTAAATTTAGATCTGAGTTTATATAAAATTTTTATTTTATATTTATAGtatata                                >  1:3141667/1‑128 (MQ=255)
                                                                                                    acATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt                           >  2:2740746/2‑128 (MQ=255)
                                                                                                        atTAACTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                             <  1:1311356/128‑1 (MQ=255)
                                                                                                         ttACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTatataa                      >  2:1251105/1‑128 (MQ=255)
                                                                                                          tatcTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                         <  2:2397010/125‑1 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                         <  1:1162941/128‑1 (MQ=255)
                                                                                                            tcTATAGAGTTAATTAT‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                         <  2:378896/127‑1 (MQ=255)
                                                                                                             cTATAGAGATAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaataa                      <  2:52168/128‑1 (MQ=255)
                                                                                                                taGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATATTTTATATATTTAATAAttt                   >  1:1971534/1‑128 (MQ=255)
                                                                                                                 agagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATTCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa                  >  2:2879384/1‑128 (MQ=255)
                                                                                                                           ag‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa          <  2:1924819/127‑1 (MQ=255)
                                                                                                                            gatatatatatatatatatatatatat‑‑atatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt             <  2:732401/123‑1 (MQ=255)
                                                                                                                            g‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa         <  1:894829/128‑1 (MQ=255)
                                                                                                                             tgatatatatatatatatatatatat‑‑atatatGCAATCGATCAGCATAAAATTGAGAAATTAATATCTGATTTTCTATTAAATTTATATTTTATATTTATATTTTATAAATTTAAAAATATATAtttt            >  1:1905727/5‑128 (MQ=255)
                                                                                                                              taatgatatatatatatatatatat‑‑atatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTAGGTCTTAAATTTGTAGTTTTTATTTATTGTTTATATATTTAATTATTTATAttttt           >  1:2933866/6‑128 (MQ=38)
                                                                                                                               atatatatatatatatatatatat‑‑atatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa          <  2:1166877/126‑1 (MQ=255)
                                                                                                                                tatatttatatatatatatatat‑‑atatgtTCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa         <  2:2190283/127‑1 (MQ=255)
                                                                                                                                atcatatatatatatatatatat‑‑atatgtGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa         <  2:1978647/125‑1 (MQ=255)
                                                                                                                                 atatatatatatatatatatat‑‑atatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat        <  2:1782211/128‑1 (MQ=255)
                                                                                                                                  tatatatatatatatatatat‑‑atatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAata       <  1:2315975/128‑1 (MQ=255)
                                                                                                                                  tatatatatatatatatatat‑‑atatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAata       >  1:2569659/1‑128 (MQ=255)
                                                                                                                                    tatatatatatatatatat‑‑atatatTCAAGCGATCAGAATAAAATGGTGAAATATAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTAAAAATTAAATAATATAGATTTTTAATAtt     >  1:348625/1‑128 (MQ=255)
                                                                                                                                     |                                                                                                                                   
CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT‑‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTA  >  CP016816/437758‑438014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.