New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 203895261 (0.200)266 (0.180)
+TTT		 94/214 10.7 47.9% intergenic (+279/+179) JCVSYN2_00845/JCVSYN2_00850 lipoprotein/inorganic diphosphatase
?CP016816 203896 = 294 (0.200)intergenic (+280/+178) JCVSYN2_00845/JCVSYN2_00850 lipoprotein/inorganic diphosphatase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 605 total aligned reads displayed.

TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA  >  CP016816/203769‑204023
                                                                                                                                                |                                                                                                                                     
ttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTGTCAACATTACAACGCTTTCAAA‑TTGGA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑GG‑‑‑‑t                                                                                                                                       >  2:1631558/1‑128 (MQ=255)
ttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑t                                                                                                                                       >  1:3141660/1‑128 (MQ=255)
   aatttttttATAAAAAAAAATAAAAATTTTTAA‑TTTAAATCCATTTGTAAAAAAGCCTA‑TTTTTTATGTTTTTTTTTATAATTATCAAAATTACAACGCTTTCAAA‑TTGTT‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑t                                                                                                                                  <  1:304430/126‑1 (MQ=255)
     tttttttAAAAAAAAAAATAAAAATTTTTAA‑TTTAAAGAATTTTTTAAAAAATCTTT‑TTTTTTATGTTTTTTTTTATAATTTTAAAAATTAAAAATCTTTAAAA‑TTTTT‑TTTTTTTTG‑‑‑G‑‑‑‑‑T‑tt‑‑‑‑ttt‑‑ttt                                                                                                                                <  1:1296204/128‑1 (MQ=255)
      ttttttATAAAAAAAAATAAAAATTTTTAA‑TTTAAAGCCATTTTTAAAAAAGCCTA‑TTTTCTAGGCATTTTATTATACTTATCAACATTAAAACCCTTTAAAA‑TTTTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑t‑tt‑‑‑‑ttt‑‑tttt                                                                                                                               >  1:2071544/1‑128 (MQ=255)
       tttttAT‑AAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttt                                                                                                                             >  1:936772/1‑128 (MQ=255)
        ttttATAAAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑A‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttt                                                                                                                             >  2:1366832/1‑128 (MQ=255)
             taAAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑ttttttttttt                                                                                                                        >  1:2743793/1‑128 (MQ=255)
             ataaaaaaaaTAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAGCATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑ttttttttttt                                                                                                                        >  1:390205/3‑128 (MQ=255)
              aaaaaaaaaaaaaaATTTTTTATTTTAAATCAATTTTTAAAAAATCATT‑TGTTATTTTCTTTTTATTTTAATTATCAAATTTAAAACGTTTTTAAA‑TTTTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑ttttttttttt                                                                                                                        <  1:2350178/128‑1 (MQ=255)
              aaaaaaaaaTAAAATTTTTTCA‑TTTATATTCATTTTTAAAAAAGCCTA‑TTTTTTAGGGGTTTTTTTATACATATCAAAATTACAACGCTTTCAAA‑GTGTT‑TTTTTTTTG‑‑‑G‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttttttttt                                                                                                                       <  1:1582326/128‑1 (MQ=255)
              aaaaaaaaaTAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttttttttt                                                                                                                       >  1:1392889/1‑128 (MQ=255)
              aaaaaaaaaTAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttttttttt                                                                                                                       >  2:385933/1‑128 (MQ=255)
                 aaaaaaTTAAAATTTTTTA‑TTTAAATCCAATTTTATAAAATCCTT‑TGTTTTAGGCTTTTTATTATACTTATCAAAATTAAAACGCTTTCAAA‑GTGTT‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑ttttttttttttttt                                                                                                                    <  1:1205925/128‑3 (MQ=255)
                  aaaaataaaaatTTTTAA‑ATTAAAGACATTTGTAAAAAACCCTA‑TTTTCTATGCTTTTTATTATAATTATCAACATTACAACGCTTTAAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttttttttttttt                                                                                                                   <  2:2663899/128‑4 (MQ=255)
                    aaataaaattTTTTCA‑TTTAAATACATTTTTAAAAAAGCCTT‑TTTTCTTTGCTTTTTATTATAATTATAAAAATTACAACGCTTTCAAA‑TTTTT‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑T‑‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑Taaaa                                                                                                               <  1:600088/128‑1 (MQ=255)
                      ataaaaatTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑tttttttttttttttttaaa                                                                                                               >  2:2695998/1‑121 (MQ=255)
                        aaaaatTTTTAA‑TTTAAAGACATTTGTAAAAAAGCCTT‑TTTTTTAGTCTTTTTATTATAATTATCAAAATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑CT‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAt                                                                                                             <  2:2599129/128‑1 (MQ=255)
                         aaaatTTTTAA‑TTTAAATCCATTTTTAAAAAATCTTT‑TTTTTTATTCTTTTTTTTTTAATTATAAAAATTACAACCCTTTAAAA‑TTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATaa                                                                                                           <  2:2570775/128‑1 (MQ=255)
                         aaaatTTATTA‑TTATATGCTATTTGAAAAAAATCTTT‑TTTTGTAGGTTTTTTTTTTTAATTTTTAAAATTAAAACTTTTTCAAA‑TTTTA‑TTTTTTAGG‑‑‑G‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATa                                                                                                            <  2:2086176/128‑1 (MQ=255)
                          aaatTTTTCA‑TTTAAAGCCATTTTTAAAAAAGCCTA‑TTTTATAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTTTT‑TTTTTTAGG‑‑‑CTT‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATa                                                                                                            <  2:541031/128‑1 (MQ=255)
                          aaatTTTTAA‑TTTAAATCCATATTTAAAAAATCATA‑TTTTATAGTATTTTTTTTATACTTAAAAACATTAAAACGTTTTAAAA‑TTTTT‑TTTTTTTGG‑‑‑CTT‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATa                                                                                                            <  2:226149/128‑1 (MQ=255)
                           aatTTTTAA‑TTTAAATCATTTTTTTAAAATGCCTT‑TGTTGTATGATTTTTATTTTAATTATATAAATTACAACTTTTTCAAA‑TTTTT‑TTTTTTATG‑‑‑T‑‑‑‑‑T‑TG‑‑‑‑ttt‑‑ttttttttttttttttgtaaaaata                                                                                                          <  1:2456531/128‑13 (MQ=255)
                               tttta‑ttttaAGTCATTTTTAAAAATGAATA‑ATTTATAGGTTTTTTATTATATTTATCAACATTTCAACTGTTTCAAT‑GTTTA‑TTTTTTTGG‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTa                                                                                                      <  1:1142399/128‑1 (MQ=255)
                                ttCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAATAGtta                                                                                                     >  1:2991265/1‑126 (MQ=255)
                                      ttaaatataTTTGTAAAAAACCATT‑TTTTATATGTTTTTTTTTTTATTTATAAAAATTTAAAATCTTTAAAA‑GTTTA‑TTTTTTATG‑‑‑G‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGAtt                                                                                                 <  2:747705/120‑1 (MQ=255)
                                       tAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑‑TT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAACTAATATTTggc                                                                                             >  1:190469/1‑127 (MQ=255)
                                        attaacATTTGTAAAAAAGTCTATTGTTTTTGTTTTTTTTTTTTA‑TTATAAAAATTAAAATGTTTTAAAA‑TTTTT‑TTTTTTTGGGTTT‑‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGAttt                                                                                                <  1:703157/123‑1 (MQ=255)
                                          tgCCATTTTTAAAAAATCCTA‑TGTTATTGGCTTTTTATTTTACTAATAAACATTAAAACGCTTTCAAT‑TTGTA‑TTTTTTTTGTT‑T‑‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGa                                                                                             <  1:2797453/127‑1 (MQ=255)
                                           gcaaTTTTTAAAAAACCCTT‑TTTTTTATGTTTTTTATTATAATTATAAAAAATAAAAAGGTTTCAAA‑GTTTT‑TTTTTTATG‑‑‑CTTTTTT‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTg                                                                                               <  1:2484837/125‑1 (MQ=255)
                                           gCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAAAAAATTAATAttttata                                                                                            >  1:2921852/1‑124 (MQ=255)
                                              aTTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATTAAAAtttttaaaaaa                                                                                        >  2:856992/1‑120 (MQ=255)
                                               ttttTAAAAAATGTTA‑TGTTCTATTTTTTTTATTTTAATTATTAAAATTACAACGCTTTAAAATTTTTT‑TTTTTTTGG‑‑‑G‑‑‑‑‑TGTT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑Ac                                                                                       <  2:2722448/128‑1 (MQ=255)
                                               tttGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTGGATAA‑Ac                                                                                       >  2:2511747/1‑128 (MQ=255)
                                                   ttaaaaaTCATA‑TTTTTTAGTCTTTTTTTTTTAATTATTAAAATTAAAAAGATTTAAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑‑TT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACt                                                                               <  1:2565010/126‑1 (MQ=255)
                                                    aaaaaaTCTTA‑TGTTATATTATTTTTTTTATAATTATAAACATTTCAACGCTTTCAAA‑TTTTT‑TTTTTTATG‑‑‑CTT‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑Caaaa                                                                                 <  2:3149888/128‑1 (MQ=255)
                                                    aaaaaaTCCAA‑TTTTTTATGCTTTTTATTAAAATTATAAACATTAAAACGCTTTAAAA‑TTTTA‑TTTTTTTTG‑‑‑CTT‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑Caaaa                                                                                 <  2:2534868/128‑1 (MQ=255)
                                                    aaaaaaGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTTTTTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAATTAATAtttttataaaacaa                                                                                     >  2:615075/1‑117 (MQ=255)
                                                     aaaaaGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAATGTATTATTTTGAAAA‑AC‑Caaaaa                                                                                >  2:1226057/1‑127 (MQ=255)
                                                      aaaaGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATTAAAATGTTGAACA‑AC‑Caaaaat                                                                               >  2:2992939/1‑126 (MQ=255)
                                                         aGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TTAAAATAAAAGTATAATTTTGATCA‑Acactaacaata                                                                             >  2:1042364/1‑118 (MQ=255)
                                                          gCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTTTTTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTGTATAA‑AC‑AAAAAatat                                                                             >  2:1549210/1‑128 (MQ=255)
                                                            cTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGGTTCA‑AC‑Caaaaattttaca                                                                         >  2:1478389/1‑120 (MQ=255)
                                                                   tatattttttttATTATAATAATTAAAATTTCAACTCTTTCAAA‑GTGTA‑TTTTTTATG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCaaaaaaa                                                                  <  2:1702016/121‑1 (MQ=255)
                                                                     tAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGT‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAGTATGATTTGGATCA‑AC‑CCAAAAGAT‑ATCAAAAAAATTa                                                               >  2:2876959/1‑128 (MQ=255)
                                                                     tAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTGTATCA‑AC‑AAAACATAA‑TTAAAAAAAAATaaa                                                             >  2:1661069/1‑128 (MQ=255)
                                                                      atgCTTTTTTTTATAATTTTAAAAATTACAAAGATTTTAAA‑GTGTA‑TTTTTTTGG‑‑‑G‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTaa                                                              <  1:353573/126‑1 (MQ=255)
                                                                      aGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAGTAAGATTTGGATAA‑AA‑CAAAAATTT‑ATAAAAAAAATTaaa                                                             >  2:2625731/1‑128 (MQ=255)
                                                                       ggCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑‑TT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAATATTTTGATCA‑AC‑CAAAAAAAT‑ATCAAAAAAATTaaaaa                                                           >  2:199168/1‑128 (MQ=255)
                                                                         ttttttATTATAATTATCAACATTACTACGGTTTAAAA‑GTGTA‑TTTTTTTGG‑‑‑G‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTaaaaa                                                           <  2:2641063/127‑1 (MQ=255)
                                                                          tttttATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAGTAAAATTTTGATCC‑AC‑CAAAACAAA‑TAAAAAAAAAATaaaaa                                                           >  1:2856866/1‑128 (MQ=255)
                                                                           ttttttTATAATTATTAAAATTAAAACTGTTTTAAT‑TTTTT‑TTTTTTTTG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTaaaaaa                                                          <  1:1094492/128‑1 (MQ=255)
                                                                            tttATTATACTTATCAACATTTCAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAGTAAGATTTTGATCA‑AC‑CAAAAATAT‑ATAAAAAAAATTaaaaaaa                                                         >  2:1729824/1‑128 (MQ=255)
                                                                             tttttatAATTTTAAAAATTATAAAGTTTTTAAT‑TTTTA‑TTTTTTAGT‑‑‑G‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAATATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTaaaaaaaa                                                        <  2:2411386/125‑1 (MQ=255)
                                                                               attatACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAGTAATATTTGGAAAA‑AC‑CAAAACTAT‑ATAAaaaaaaataaaaaaaatatt                                                    >  1:1524402/1‑126 (MQ=255)
                                                                                ttatACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAATAAAATTTTGATAA‑AC‑CAAAAAAAT‑Ataaaaaaaattaaaaaaaatt                                                      >  2:936073/1‑127 (MQ=255)
                                                                                 tataCTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGTATAA‑AA‑CAAAAATAT‑ATAAAAAAAATTTAAAAAAAttgt                                                    >  2:2456595/1‑128 (MQ=255)
                                                                                  ataCTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAAATTTTGATC‑‑AC‑CCAAACAATAATAAAAAAAATTaaaaaaaaaatat                                                   >  2:338987/1‑123 (MQ=255)
                                                                                  ataCTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTAAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTTTATTTTTTTTTTTTTT‑TTAAAAATAAATTTATTTTTTTTTAA‑AC‑AAAAAAAAT‑ATAAAAAAAATTAAAATAAAtaatt                                                   >  2:1806195/1‑128 (MQ=255)
                                                                                   taCTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTGTTAAAAATAAAA‑TAATATTTGGAAAACAC‑AAAAAAAAT‑A‑AAAAAAAATTAAAAAAAAtaattt                                                  >  1:2214504/1‑128 (MQ=255)
                                                                                       tATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAAAAAATTAAGATTTTGTTAA‑AA‑CAAAAATAT‑TTAAAAAAAATTAAAAAAAAtagtttagtt                                              >  2:3163402/1‑128 (MQ=255)
                                                                                        aTCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTTTTTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTTTATAA‑AC‑AAAAAATAT‑ATAAAAAAAATTAAAAAAAAtattttttt                                               >  2:2187818/1‑125 (MQ=255)
                                                                                         tCAAAATTACAACGGTTTAAAA‑GTGTATTTTTTTGGG‑‑‑T‑‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAg                                           <  1:2758364/128‑1 (MQ=255)
                                                                                          cAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAAATAAAATTTTTATAA‑AC‑CAAAAAAAA‑ATAAAAAAAATTTAAAAAAAtaatttatgatat                                           >  1:3209819/1‑122 (MQ=255)
                                                                                          aaaaaTTAAAACGATTTAAAA‑TTTTA‑TTTTTTATG‑‑‑‑‑‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGttt                                        <  1:262979/124‑1 (MQ=255)
                                                                                             cATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TTAAAATAAAAGTAAGATTTTTATCA‑AC‑CAAAACAAT‑ATAAAAAAAATTAAAAAAAAtattttattttattta                                        >  1:2819760/1‑122 (MQ=255)
                                                                                                tACAACGCTTTCAAA‑GTGTA‑TTTTTTATG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑‑‑T‑‑TTTTTTTTTTTTTA‑TAAAAATAAAATAAATATTATAAACA‑AA‑AAAAAATAT‑AAAAAAAAAATAAAAAAAAATAATTTAGTTAAGTTTCAAAtaa                                 >  1:2698733/1‑126 (MQ=255)
                                                                                                tACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATAAATATTTTGTTAA‑AA‑AAAAAATAT‑ATAAAAAAAATTAAAAAAAATATTTTATTTAAttttaa                                      >  2:2315556/1‑126 (MQ=255)
                                                                                                 tataCGCTTTAAAT‑TTGTA‑TTTTTTTTG‑‑‑T‑‑‑‑‑T‑TTTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAATCTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCaaa                                    <  1:2527236/125‑1 (MQ=255)
                                                                                                 aCAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAATAAAATTTGGATAA‑AC‑AAAAAAAAT‑AAAAAAAAATTAAAAAAAAAtattttattttatttaaaaat                                   >  1:175540/1‑117 (MQ=255)
                                                                                                 aCAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGGTTAA‑AC‑CAAAACTAT‑ATAAAAAAAATTAAAAAAAAATTTTTATTTTAGTTTCaaaaa                                  >  2:900430/1‑126 (MQ=255)
                                                                                                   aaCGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATTAATATTTGGAAAA‑AC‑AAAAAATAT‑TAAAAAAAAATTAAAAAAAATATTTTTGTTTTGTTTCaaaaa                                  >  2:2926708/1‑126 (MQ=255)
                                                                                                    aCGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATAAAGATTTGTATAA‑AC‑CAAAACAAA‑TTCAAAAAAAATAAAAAAAATAATATATTTGAGTTTaaaaaa                                  >  2:1606747/1‑126 (MQ=255)
                                                                                                    aCGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTTGATAA‑AA‑CAAAAAAAT‑ATAAAAAAAATAAAAAAAAATAGTTTATTTGAATTAAAAAtat                                 >  1:468485/1‑126 (MQ=255)
                                                                                                    aCGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TTAAAATAAAATTTATTTTTTGAAAA‑AC‑AAAAACATT‑ATAAAAAAAAATTAAAAAAATATTTTATTTGTTTTTaaaaaatg                                >  1:101139/1‑124 (MQ=255)
                                                                                                     ctcTTTTAAA‑GTGTT‑TTTTTTAGGGT‑T‑‑‑‑‑T‑TT‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTg                                <  2:2486515/126‑1 (MQ=255)
                                                                                                     cGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTTTTTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATTAATATTT‑GTTAA‑ACACAAAAGATT‑TTAAAAAAAATTAAAAAAAAAATTTTATTTAATTTTaaaaaa                                  >  2:660022/1‑126 (MQ=255)
                                                                                                      gCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTG‑AAAAAAAAAAATTAATATTTGGATAA‑AC‑CAAAAATAT‑AAAAAAAAAATAAAAAAAAATATTTTATTTTATTTTCaaaaatg                                >  2:2847700/1‑124 (MQ=255)
                                                                                                      gCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTTGATCA‑AC‑CAAAACTAT‑AAAAAAAAAATTAAAAAAAAAATTTTAATTAATTTTaaaaaatgc                               >  1:2666823/1‑123 (MQ=255)
                                                                                                           cAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTTGATAA‑AC‑CAAAACAAT‑AAAAAAAAAATTAAAAAAAAAATTTTATTTTATTTTAAAATATGCataa                           >  1:832620/1‑127 (MQ=255)
                                                                                                           cAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAATTAATATTTGGATAA‑AC‑CAAAAATAT‑AAAAAAAAAATTAAAAAAAATATTTTTTTTTAGTTTAAAATATGCaaaa                           >  2:117126/1‑125 (MQ=255)
                                                                                                           cAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGTATCA‑AA‑AAAAAATAT‑ATAAAAAAAATTAAAAAAAATATTTTATTTGTTTTTCAAATATGAatata                          >  2:3075499/1‑128 (MQ=255)
                                                                                                           cAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAAAAAAGTAAGATTTGGATTA‑AC‑CAAAACTAT‑ATAAAAAAAATTAAAAAAAATATTTTAGTTTAGTTTAAAATATGCatatat                         >  2:1014587/1‑128 (MQ=255)
                                                                                                           cAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAAAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATATTTTATTTTATTTTCAAATCATAAtatata                        >  2:425451/1‑128 (MQ=255)
                                                                                                            aaa‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAATTTTTGGTACA‑AC‑AAAAAATAT‑ATAAAAAAAATTAAAAAAAATATTTTTTTTGATTGTCaaaatgcaataat                          >  2:1398126/1‑118 (MQ=255)
                                                                                                             aa‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTGGATCA‑AC‑CAAAAATAA‑ATAAAAAAAATTAAAAAAAATATTTTTTTTTATTTTAAaatataaatataa                         >  2:496652/1‑127 (MQ=255)
                                                                                                                 tgtA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGGATCA‑AC‑CAAAAATAT‑ATAAAAAAAATTAAAAAAAATAATTTTTTTGATTTTAAAATATGAATATATATTa                     >  2:1958081/1‑128 (MQ=255)
                                                                                                                  gtA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAAAAAAATTAAAATTTGGAAAA‑AC‑AAAAAAAAT‑AACAAAAAAATTAAAAAAAATATTTTATTTAAGTTTCAAAAATTCATATATATTaa                    >  1:3095592/1‑127 (MQ=255)
                                                                                                                   tA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAAAATTTTGATAA‑AA‑CAAAAATAA‑TAAAAAAAAATTAAAAAAAATAATTTATTTTAATTTAAAAAATTAATATataataa                    >  2:1895779/1‑127 (MQ=255)
                                                                                                                   tA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAATATTTGGATCA‑AC‑CAAAACTAT‑TTAAAAAAAATTAAAAAAAATATTTTAGTTTAGTTTAAAATCTACatataaataaaaaa                 >  2:799811/1‑119 (MQ=255)
                                                                                                                    a‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TGTT‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAAAAAATTAATATTTGTATCA‑CC‑CAAAAATTT‑AAAAAAAAAATTAAAAAAAA‑AGTTAATATTAGTTTAAATTATGCATATATAGAACaat                 >  1:2884315/1‑127 (MQ=255)
                                                                                                                      ttttttAGG‑‑‑C‑‑‑‑‑T‑TGTTT‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTGGATAA‑AA‑CAAAACTAT‑TAAAAAAAAATTAAAAAAAATATTTTTGTTTTGTTTAAAATATGCattttatttaaaa                  >  1:3077109/1‑117 (MQ=255)
                                                                                                                      ttttttAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAAAAAAAGAAAGATTTCTAACA‑AC‑CAAAACTAA‑AACAAAAAAAATAAAAAAAAATATTAATTTGAGATTAAAAACTGCAATTTTTTTACAAAgg               >  1:2425183/1‑128 (MQ=255)
                                                                                                                              g‑‑‑C‑‑‑‑‑T‑TGT‑‑‑TTT‑‑TTTTTTTTTTTTTT‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTTT‑ATCAAAAAAATTAAAAAAAAAAGTTTAGTTGAGTTTCAAATCTGCTTTTAAAGTACAAAGTAAttttt        >  2:1079598/1‑126 (MQ=255)
                                                                                                                                        ttttttttttt‑‑tttttttttttttG‑TAAAAATAAAAGTAATATTTGGATCA‑AC‑CAAAAATAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt          <  2:1319499/120‑1 (MQ=255)
                                                                                                                                         ttgttttttt‑‑tttttttttttttG‑TAAAAATAAAAGTAAGATTTGGATCA‑AA‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTa         <  2:2811454/121‑1 (MQ=255)
                                                                                                                                          ttttttttt‑‑tttttttttttttG‑TATAAATAAAAGTAAGATTTGGATCT‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAt        <  1:2952689/122‑1 (MQ=255)
                                                                                                                                               tttt‑‑tttttttttttttG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg   <  1:1662823/127‑1 (MQ=255)
                                                                                                                                               tttt‑‑tttttttttttttG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg   <  1:876026/127‑1 (MQ=255)
                                                                                                                                                ttt‑‑tttttttttttttt‑tAAAAATAAAATTAAGATTTGGTTAA‑AC‑CAAAAATAT‑TTAAAAAAAATTAAAAAAAATATTTTATTTTAGTTACAAATATGAAAATATAGAAAAAAAGATTTTTTtataaa  >  2:2759472/1‑126 (MQ=255)
                                                                                                                                                |                                                                                                                                     
TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCA‑TTTAAAGCCATTTGTAAAAAAGCCTA‑TGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAA‑GTGTA‑TTTTTTAGG‑‑‑C‑‑‑‑‑T‑TG‑‑‑‑TTT‑‑TTTTTTTTTTTTTG‑TAAAAATAAAAGTAAGATTTGGATCA‑AC‑CAAAACTAT‑ATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA  >  CP016816/203769‑204023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.