New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 4088521731 (1.170)57 (0.040) 41/228 21.2 3.5% intergenic (‑116/+12) JCVSYN2_01790/JCVSYN2_01795 adenylate kinase/preprotein translocase subunit SecY
?CP016816 = 408855 1607 (1.200)intergenic (‑119/+9) JCVSYN2_01790/JCVSYN2_01795 adenylate kinase/preprotein translocase subunit SecY
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1763 total aligned reads displayed.

AATATTCATAAATAAAGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGAATAGCAA  >  CP016816/408728‑408982
                                                                                                                                |                                                                                                                               
 atatTCATAAATAAAGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATAtt                                                                                                                                <  2:1113945/128‑1 (MQ=255)
     tCATAAATAAAGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCt                                                                                                                            >  1:1374199/1‑128 (MQ=255)
       ataaataaAGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCttt                                                                                                                          >  2:1200166/1‑128 (MQ=255)
       ataaataaAGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCttt                                                                                                                          >  2:2164207/1‑128 (MQ=255)
        taaataaaGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCtttt                                                                                                                         <  2:2039322/128‑1 (MQ=255)
        taaataaaGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCtatt                                                                                                                         >  1:233743/1‑128 (MQ=255)
           ataaaGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAAAAAAAAAG‑GCATATTGCCTTTTTTa                                                                                                                      >  1:1992649/1‑128 (MQ=255)
            taaaGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTAt                                                                                                                     <  1:1952494/128‑1 (MQ=255)
             aaaGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑TCATATTTCCTTTTTTATc                                                                                                                    >  2:103465/1‑128 (MQ=255)
              aaGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAAAACAAATAAAAAAT‑ACATATTGCATTATTTATCa                                                                                                                   >  1:2389151/1‑128 (MQ=255)
               aGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑TCATATTGCCTTTTTTATCaa                                                                                                                  >  1:1502085/1‑128 (MQ=255)
               aGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCaa                                                                                                                  >  2:2315361/1‑128 (MQ=255)
                 ttacTTTTTTATAGCACTATAAAAGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAATTAAAAAAG‑GCATATTGCCTTTTTTATCAAat                                                                                                                <  1:2210241/125‑1 (MQ=255)
                  tCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAata                                                                                                               <  2:472580/128‑1 (MQ=255)
                   ccTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAatat                                                                                                              <  2:1552589/128‑1 (MQ=255)
                       ttttATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATgaga                                                                                                          <  1:2146165/128‑1 (MQ=255)
                        tttATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGAt                                                                                                         >  2:1601230/1‑128 (MQ=255)
                        tttATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGAt                                                                                                         <  2:1339545/128‑1 (MQ=255)
                           ataGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGtt                                                                                                      >  1:1764959/1‑128 (MQ=255)
                           ataGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGtt                                                                                                      >  2:1939039/1‑128 (MQ=255)
                              gCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTa                                                                                                   <  2:675507/128‑1 (MQ=255)
                               cACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTAt                                                                                                  >  2:2569914/1‑128 (MQ=255)
                               cACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTAt                                                                                                  <  2:296055/128‑1 (MQ=255)
                                aCTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTAtt                                                                                                 <  2:2848585/128‑1 (MQ=255)
                                  tataAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCt                                                                                               >  2:2907023/1‑128 (MQ=255)
                                   ataAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCtt                                                                                              >  1:1001327/1‑128 (MQ=255)
                                    taAATGTATTTTATAACAATCTATATTCTAAATAACATAAACAAATAAAATAGTAAAGTATAAATTAATAAATACAAATAAAAAAG‑GCATATTTCCTTTTATATCAAATATCAGAAGTTTTATTCtta                                                                                             >  1:1582253/1‑128 (MQ=255)
                                     aaaTGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCttat                                                                                            >  1:3120624/1‑128 (MQ=255)
                                            ttttATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtatt                                                                                     <  2:1280481/128‑1 (MQ=255)
                                            ttttATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtatt                                                                                     >  1:1101539/1‑128 (MQ=255)
                                            ttttATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtatt                                                                                     <  1:1818214/128‑1 (MQ=255)
                                            ttttATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtatt                                                                                     <  1:2833132/128‑1 (MQ=255)
                                             tttATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtatta                                                                                    >  2:1759268/1‑128 (MQ=255)
                                              ttATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtattat                                                                                   >  1:2426896/1‑128 (MQ=255)
                                              ttATAACAATATATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAAtattat                                                                                   <  2:1698417/128‑1 (MQ=255)
                                                ataACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATAttatta                                                                                 <  1:2771912/128‑1 (MQ=255)
                                                ataACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATAttatta                                                                                 >  2:36119/1‑128 (MQ=255)
                                                ataACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATAttatta                                                                                 >  2:3085950/1‑128 (MQ=255)
                                                 taACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAg                                                                                <  1:377394/128‑1 (MQ=255)
                                                   aCAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTg                                                                              >  2:1884287/1‑128 (MQ=255)
                                                   aCAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTg                                                                              >  1:2043612/1‑128 (MQ=255)
                                                    cAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGa                                                                             >  1:919972/1‑128 (MQ=255)
                                                    cAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGa                                                                             <  1:1045644/128‑1 (MQ=255)
                                                     aaTCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑ACATATTGCCTATTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGaa                                                                            >  2:940065/1‑128 (MQ=255)
                                                      aTCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAAt                                                                           <  1:2630594/128‑1 (MQ=255)
                                                       tCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAAtt                                                                          >  2:1071080/1‑128 (MQ=255)
                                                          attttCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAAttttt                                                                       >  1:2260924/4‑128 (MQ=255)
                                                            atTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTATTGAAtttttct                                                                     >  1:2525998/1‑128 (MQ=255)
                                                            atTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAAtttttct                                                                     <  2:2735558/128‑1 (MQ=255)
                                                                tAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGATtttttcttttt                                                                 >  1:638297/1‑128 (MQ=255)
                                                                tAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAAtttttcttttt                                                                 >  1:272664/1‑128 (MQ=255)
                                                                     aacataacCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑TCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTtttcttttttcttt                                                            <  2:2386164/128‑1 (MQ=255)
                                                                      acataacCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAACG‑CCATATTGCCTTTTATATCAAATATGAGAGGTTTTATTCGTATGTCTATTATTAGTGTATTTttcttttttctttt                                                           >  1:586283/1‑128 (MQ=255)
                                                                      acataacCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTttcttttttctttt                                                           <  1:2865634/128‑1 (MQ=255)
                                                                         taacCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCaa                                                        >  1:703717/1‑128 (MQ=255)
                                                                          aacCTAATAAAATAGTTAAGTTTGAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAAAATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAAt                                                       <  1:1158704/128‑1 (MQ=255)
                                                                          aacCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAAt                                                       <  2:2653298/128‑1 (MQ=255)
                                                                           acCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATg                                                      <  1:1255485/128‑1 (MQ=255)
                                                                           acCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATg                                                      <  1:415103/128‑1 (MQ=255)
                                                                               aataaaataGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGt                                                  <  2:823792/128‑1 (MQ=255)
                                                                                ataaaataGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGtt                                                 >  1:2673564/1‑128 (MQ=255)
                                                                                   aaataGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTttg                                              <  1:3075198/128‑1 (MQ=255)
                                                                                   aaataGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTttg                                              >  2:164665/1‑128 (MQ=255)
                                                                                     ataGTTAAGTTTCAATTAATTAATAAAAATAAAAAAG‑GAATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTttgtt                                            <  2:1998656/128‑1 (MQ=255)
                                                                                      taGTTAAGTTTCAATTAATTTATAGAAATAAAAAAT‑GGATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTttgttg                                           <  2:1812442/128‑1 (MQ=255)
                                                                                      taGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTAt                                                                                                  >  2:573529/1‑73 (MQ=255)
                                                                                       tcatAAGTTTCAATTAAATAATACTAATAAAAAAG‑GAATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTATTATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGa                                          <  1:750608/125‑1 (MQ=255)
                                                                                           aaGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGaataa                                      >  2:1167075/1‑128 (MQ=255)
                                                                                           aaGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGaataa                                      >  2:736532/1‑128 (MQ=255)
                                                                                            aGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTTaataat                                     >  1:3203632/1‑128 (MQ=255)
                                                                                            aGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGaataat                                     >  1:1444149/1‑128 (MQ=255)
                                                                                              tttCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAAttc                                   <  1:207209/128‑1 (MQ=255)
                                                                                               ttCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAAttct                                  <  1:2950568/128‑1 (MQ=255)
                                                                                               ttCAATTAATTAATACAAATAAAAAAG‑GCATATTGACTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAAttct                                  <  2:3029543/128‑1 (MQ=255)
                                                                                                taaattaattAATACAAATAAAAAAGTGCATATTGACTTTTTTATCAAATATGAGATGTTTTATTCGTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAAttct                                  <  2:407662/126‑1 (MQ=255)
                                                                                                tCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAAttctt                                 <  2:614225/128‑1 (MQ=255)
                                                                                                 cAATTAATTAATACAAATAAAAAAG‑GCATATTGACTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAAttcttc                                <  1:1901234/128‑1 (MQ=255)
                                                                                                  aattaattAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTcc                               >  1:881132/1‑128 (MQ=255)
                                                                                                  aattaattAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTcc                               <  1:977455/128‑1 (MQ=255)
                                                                                                  aattaattAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTcc                               >  1:1196859/1‑128 (MQ=255)
                                                                                                     taattaatACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCttt                            >  1:1709319/1‑128 (MQ=255)
                                                                                                       attaatACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTATTa                          >  2:2111860/1‑128 (MQ=255)
                                                                                                       attaatACAAATAAAAAAG‑GAATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTa                          <  1:3155260/128‑1 (MQ=255)
                                                                                                            tACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAAttgt                     >  2:3146943/1‑128 (MQ=255)
                                                                                                              cAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAAttgttg                   <  1:467973/128‑1 (MQ=255)
                                                                                                               aaaTAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGa                  <  2:2432082/128‑1 (MQ=255)
                                                                                                               aaaTAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGa                  <  1:523051/128‑1 (MQ=255)
                                                                                                                   aaaaaaG‑GCATATTGCCTTTTTTATC‑AATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACGGt             >  2:147488/1‑128 (MQ=255)
                                                                                                                     aaaaG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGtt            <  1:833957/128‑1 (MQ=255)
                                                                                                                      aaaG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTATTCCTTTTAATTGTTGAACAGttt           >  1:1649922/1‑128 (MQ=255)
                                                                                                                       aaG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTg          >  2:2251071/1‑128 (MQ=255)
                                                                                                                       aaG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTg          <  2:1406392/128‑1 (MQ=255)
                                                                                                                       aaG‑GCATATTGACTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTg          <  1:794220/128‑1 (MQ=255)
                                                                                                                         g‑gCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGaa        >  2:3196411/1‑128 (MQ=255)
                                                                                                                          tgaatatTGTATTATTTATCAAATATGATATGTTTTATTCTAATTAAAATTATTAGTGAATTTTTCTTTTTTCTTTTCTATGAAGTTTTGTTGAAAAATTCTTACTTTTAATTGTTGAACAGTTTTaa        <  1:3013032/125‑1 (MQ=255)
                                                                                                                             atatTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGAATAg     <  2:889170/128‑1 (MQ=255)
                                                                                                                              tatTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAAttg                      <  2:2513589/110‑1 (MQ=255)
                                                                                                                              tatTGCCTTTTTTATAAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGAATAGc    <  1:1313512/128‑1 (MQ=255)
                                                                                                                               atTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGAATAGCa   >  2:2777715/1‑128 (MQ=255)
                                                                                                                               atTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGAATAGCa   >  1:2585995/1‑128 (MQ=255)
                                                                                                                                |                                                                                                                               
AATATTCATAAATAAAGTTCCTTTTTTATAGCACTATAAATGTATTTTATAACAATCTATATTCTAAATAACATAACCAAATAAAATAGTTAAGTTTCAATTAATTAATACAAATAAAAAAG‑GCATATTGCCTTTTTTATCAAATATGAGATGTTTTATTCTTATTAATATTATTAGTGAATTTTTCTTTTTTCTTTTCAATGAAGTTTTGTTGAATAATTCTTCCTTTTAATTGTTGAACAGTTTGAATAGCAA  >  CP016816/408728‑408982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.