New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =2471 (0.680)365 (0.110) 125/220 36.6 14.8% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 2029 (0.640)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2836 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                  |                                                                                                                                 
 tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttt                                                                                                                                  >  1:6585274/1‑128 (MQ=255)
 tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttt                                                                                                                                  >  1:5369112/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttt                                                                                                                         >  2:2045699/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttattttttttt                                                                                                                         >  1:7682721/1‑128 (MQ=255)
           cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttttt                                                                                                                        >  1:4032684/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAATAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAAATAATTTGAACTTGTAAAAAAAAGCtttttttttttttttt                                                                                                                       <  2:5887679/128‑1 (MQ=255)
               aaTTTATAGCAATTGTATGAAATATTAATAAACAAAAAAAATTATATTTTTATAAATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAAAAGCtttttttttttttttttat                                                                                                                    <  2:4861537/128‑3 (MQ=255)
                aTTTATTGCAATTTTATGAAATATTAAGAAAATAAAAATATTTACTTTTTTTATATTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTta                                                                                                                   <  1:7410245/128‑1 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTaat                                                                                                                  >  1:293147/1‑128 (MQ=255)
                     tCGCTCTTTTATTAATTTCTAATAAAATAAAAATATTATATTTATATTTATTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAAAACCTTTTTTTTTTTTTTTTTTATAATgg                                                                                                             <  2:2193665/128‑1 (MQ=255)
                      ctctaatttatgaattatgaatAAAATAAAACTATTTTATTTTTATTTATTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATgg                                                                                                             <  2:4199193/120‑1 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATATAAat                                                                                                         >  1:7256425/1‑128 (MQ=255)
                           tttttttaaTTATTAAAAAACAAAAAAAATTATTTTTTTATATATTTTTTTTTTATTCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAAAACCTTTTTTTTTTTTTTTTTTATAATGGAAatat                                                                                                       <  2:4316831/121‑1 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTAATAATGTAAataa                                                                                                       >  1:245417/1‑127 (MQ=255)
                             gTATTAATTATTAATAAACTAAAAATATTTTATTTTTAGATATTTTTTGTATATTCAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                                    <  1:5945059/128‑1 (MQ=255)
                               attaaTTAGTTATAAAATAAAAATTTTATTTTTTTTTATATTTTTTTTATATGAAAATTTTTAAAAAATTTATTTGTACTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                  <  1:1334155/125‑1 (MQ=255)
                               aTGAATTAGTAATAAACTAAAAATATTATATTTTTAGATATTTTTTTTATATGCAAATTTTTAAAAAAATAATTTTAACTTGTAAAAAATAGC‑‑TTTTTATTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                  <  2:3807380/128‑1 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATttaaatttaaat                                                                                                   >  2:5430826/1‑128 (MQ=255)
                                tttattattAATAAAAAAAAAATATTTATTTTTTATTATATTTTTTTATTTTCAAATTTTTAAAAAATTAAATTTAAAATTTAAAAAAAATCTTTTTTTTTTTTTTTTTTATCATGGAAATATAAAtt                                                                                                  <  2:7320934/125‑1 (MQ=255)
                                attattattAACAAACAAAAAATATTATTTTTTTATTAAATTTTTTTATAATCAAAATTTTTAAAAATTAATTTTTAAATTTAAAAAAATCGTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                  <  2:6847090/125‑1 (MQ=255)
                                  aaatattAAAAAACTAAAACTATTATCTTTTTATATATTATTTTTATTTTAAAATTTTTAAAAAATTAAATTTAAATTTTAAAAAAAAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAttt                                                                                                 <  1:3142262/122‑1 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATTAAAATATAAATTTTa                                                                                               >  2:5288622/1‑128 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGATATTTTTTTTTTTTTTTTATAATTTAAATAAAAAtttaa                                                                                               >  2:5724274/1‑126 (MQ=255)
                                    tttataataaAATTAAACTATTATATTTTTTTATTTTTTTTTTTTATTTAAATTTTTAAAAAATTAATTTGAAATTTTAAAAAAAAGCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                              <  1:7533258/124‑1 (MQ=255)
                                    ttattaAGAAAATAAAAATATTATATTTTTATATATTTTTTTTATATTAAAATTTTTAAAAAAATAATTTGAAATTGTAAAAAATATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                              <  2:4621973/128‑1 (MQ=255)
                                     tattaattaataaaaattaTTATATTTTTTTATATTTTTTTTATATTAAAATTTTTAAAAAAATAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                            <  1:4628073/116‑1 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATATTTGAATTATAATTTTTatt                                                                                             >  2:1459977/1‑126 (MQ=255)
                                     tAGTAAGAAAAAAAAACTATTATCATTTTTTATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATACC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                            <  1:7810352/128‑1 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAATGTAAATATAAATTTTattt                                                                                            >  1:5138342/1‑125 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                           >  1:1969908/1‑128 (MQ=255)
                                        ttataaacttaaaataTTTTTTTTTTATATATTTTTTTTATATGTAAATTTTTTAAAAATTTATTTTAAATTTTAAAAAATTTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  2:2769139/124‑1 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTAt                                                                                         >  1:2637710/1‑128 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTtatttatt                                                                                        >  1:6896714/1‑128 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAATATTTAAAATAAAATTTTTatttttttt                                                                                       >  2:3665225/1‑120 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATGTAAATAAAAATATTattaattttt                                                                                      >  2:1827881/1‑119 (MQ=255)
                                             aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAAATTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATGAAAATATAATTTTTAGTTAtttttt                                                                                    >  1:3460315/1‑126 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATATTTAAAAAATAAATTTAATTTATttttttt                                                                                  >  2:1128939/1‑127 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTATTTTTTTTATTATAAAATAAAAATAAATTTTatttttttattta                                                                                   >  1:3273180/1‑116 (MQ=255)
                                                taaaaattTTATTTTTTTATTTATTTTTTGTATATTCAAATTTTTAAAAAATAAATTTTAAATTTTAAAAAATTTATTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgttg                                                                                  <  2:2887674/128‑1 (MQ=255)
                                                  aaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTAATATATttttttttat                                                                               >  1:4806819/1‑124 (MQ=255)
                                                  aaaataTTATTTTTTTATTTATTTTTTTTATATTAAAATTTTTTAAAAATTAATTTTTAATTTTAAAAAAAATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                               <  1:1800806/128‑1 (MQ=255)
                                                   aaaattatatatttttttatattttttTTTTATTCAAATTTTTAAAAAATTAATTTTAATATTTAAAAAATATGTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                               <  1:1718049/121‑1 (MQ=255)
                                                    ataatttttattttttTATATTTTTTTTTTTTTTTAATTTTTTAAAAATTTATTTTTAATTTTAAAAAAAATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                              <  2:4998193/118‑1 (MQ=255)
                                                    aatattatCTTTTTATATATTTTTTGTTTATTTAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAATATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                             <  2:5991607/126‑1 (MQ=255)
                                                     atattatTTTTTTTAATATTTTTTGTATATTCAAAATTTTAAAAAATTAATTTTAAATTTTAAAAAATATTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                              <  2:7205555/127‑1 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATTTAAATTTTTGTTATTTTTTTGTATAAGTa                                                                          >  2:7456951/1‑128 (MQ=255)
                                                       attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑TTTTATTTTTTTTATTTAAAATTGAAATATAAATTTTTAGTATttttttttaaaattta                                                                         >  1:5599629/1‑118 (MQ=255)
                                                       attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTTAAAATATAAATTTTTGTTATTTTTTTTTATaatt                                                                           >  2:1690193/1‑126 (MQ=255)
                                                         ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAAAATTTAAAAATAAATTTTAGTAATTTTTTTTTATAATTAt                                                                         >  1:4461235/1‑128 (MQ=255)
                                                          tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAAATGGAAATTTAAATTTTAGTTATTTTGTTTTGTaatttt                                                                         >  1:6203839/1‑124 (MQ=255)
                                                           ttttttttttttatTTTTTTTTTATTTAAATTTTTTAAAAATTTATTTTTAATTTTAAAAAATATTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                        <  2:7665128/117‑1 (MQ=255)
                                                            ttttttttttttttttttttttATGTAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAATATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTa                                                                     <  1:6063910/116‑1 (MQ=255)
                                                             cTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTTTTTTATAATtatata                                                                     >  2:6566522/1‑128 (MQ=255)
                                                              tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTTTTTTTTTGTCTAATTAtattaa                                                                    >  2:7542397/1‑123 (MQ=255)
                                                               ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTGTAAATATAATTTTTAGTTATTTTGTTTTCTattttagtata                                                                    >  2:7088503/1‑118 (MQ=255)
                                                                ttttaatatTTTTTTTTAATGAAATTTTTATAAAAATAATTTTTAAATTTTAAAAAAAACGTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaa                                                                 <  2:6128106/123‑1 (MQ=255)
                                                                tttATATATTTTTTGTTTATTTAAATTTTTAAAAAATTTATTTTAATTTTTTAAAATATTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaa                                                                 <  1:2769432/128‑1 (MQ=255)
                                                                tttATATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTATAATTATATaaaaaa                                                                >  2:4732562/1‑128 (MQ=255)
                                                                tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGTAATTATAAATTTTATTTTTTTTTTTTTGTAATAATATaaaaaa                                                                >  1:4307806/1‑128 (MQ=255)
                                                                  tatatatTTTTTGTTTTTGAAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                               <  2:2322903/125‑1 (MQ=255)
                                                                  tAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGTAAATAAAAATTTTAGTTTTTTTTTTTTATAATTATAAAAAAAAAt                                                              >  1:5837367/1‑128 (MQ=255)
                                                                   tatatttttttttATTTTAAATTTTTAAAAAATTTATTTTTAATTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaa                                                                <  1:7128616/123‑1 (MQ=255)
                                                                    tatatTTTTTTTATTTTGAATTTTTTTAAAAATTAATTTGTACTTGTAAAAAATTTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATa                                                             <  2:4455166/127‑1 (MQ=255)
                                                                    tatatTTTTTGTTTATGCAAATTTTTAAAAAAATAATTTTAACATTTAAAAAATTCC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                            <  2:1941723/127‑1 (MQ=255)
                                                                       tttttttttATATTTATATTTTTTTATAATTTATTTTTAATTTTAAAAAAAATTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                           <  2:6260784/127‑1 (MQ=255)
                                                                       atTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATATTGTAAATTTAAATTTTAGTTTTTTTTTTGTATAATTATATAAAAAAATATaa                                                          >  1:6444498/1‑128 (MQ=255)
                                                                         tttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATGTTATTTTTTTTCAAATTATAAAAAAAAATATaaata                                                       >  1:2537305/1‑126 (MQ=255)
                                                                            ttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTTTTTTTTTTTAAAATTATAAAAAAAAATATaaataaa                                                     >  1:2151952/1‑124 (MQ=255)
                                                                            ttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTATATTTATATaaaaaaaaatatatataa                                                    >  2:5562905/1‑117 (MQ=255)
                                                                            ttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATTTAAATTTTAGTTATTTTGTTGTATAAGTTTATAAAAAAATTTAAAGTaaa                                                    >  2:792348/1‑128 (MQ=255)
                                                                                atatttaaaTTTTTAAAAAATTAAATTTAATTTTTAAAAAATATTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATTTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaaaa                                                  <  2:2634168/122‑1 (MQ=255)
                                                                                  tttaaatttttTAAAAATTTATTTTTAATTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAat                                                <  1:1500455/121‑1 (MQ=255)
                                                                                  tattaaaTTTTTAAAAAAATATTTTTTACTTTTTAAAAATAATCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAata                                               <  2:3250651/124‑1 (MQ=255)
                                                                                   tttataTTTTTTAAAAATTTATTTTTAATTATAAAAAATTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAatat                                              <  2:2496245/123‑1 (MQ=255)
                                                                                    gCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATATTGTAAATATAAATTTTATTTATTTTTTTTTCAAATTTTATAAAAAAATATAAAGAAAAAAATAtt                                             >  1:1173258/1‑128 (MQ=255)
                                                                                        aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATTTATTTTTTTTTATAATTATAAAAAAAAATATAAATTAAAAAATTTTTTTa                                         >  2:1010320/1‑128 (MQ=255)
                                                                                             taaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTGTTGTATAAGTATATAAAAATATAGAAATTTAAAAATTATTTTAAAATTa                                   >  1:3924450/2‑128 (MQ=255)
                                                                                              aaaaaaTTTATTTTAAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                                    <  2:867142/128‑1 (MQ=255)
                                                                                              aaaaaaTTAATTTTTAATTGTAAAAAATTTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                   <  1:6721798/128‑1 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTATTTATTGTAATTATAATTTTATGTTATTTTGTTGTATAAATATATAAAAAAATTAAAAGCAAAAAAATTTTTTaaatttattaa                               >  1:7032809/1‑120 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAATGGAAAAATAAATTTTAGGTATTTTGTTGTATAAGTATCTAAAAAAATATAAAGGAAAAAATATTTTTTAATTTAATaat                              >  2:3575653/1‑126 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTGAAATTTAAATTTTATTTTTTTTTTTTTGTAAGTTTATAAAAAAATTTAAAGTAAAAAATATTGTTATAAGttaaaat                              >  2:394162/1‑122 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAATATT‑‑AAATAAAAATTTATTGTTTTTTTTTTTTAAATATATATAAAAAAATAAAATTAAAAATATTTTTaaaatattaaaaaaa                           >  2:1281652/1‑117 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATATTGAAAATATAATTTTTTGTTATTTTGTTTTATAATTTTATAAAAAAAAAGAAACTAAAAAATTTTTTTaaaaagaaaaata                             >  1:3758825/1‑119 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGTATTAGTATATAAAAAATTATAAAGGATAAAATATTTTTAAAAGTATtaataa                            >  2:7793729/1‑128 (MQ=255)
                                                                                                         tttaaattttAAAAAATTTCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAatt                        <  2:4062652/119‑1 (MQ=255)
                                                                                                           taaattttAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAattatt                     <  2:6679624/121‑1 (MQ=255)
                                                                                                             aattttAAAAAATATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                    <  2:3423450/123‑1 (MQ=255)
                                                                                                                 tttaaaaaTTTCTTTTTTTTTTTTTTTTTTTATTATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAAt                 <  1:2314557/125‑1 (MQ=255)
                                                                                                                  tAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTATTGTAATTATAATTTTTAGGTTTTTTTTTGTGTAATTTGATAAAAAAATAATAAGATAAAAATTTTTTTAAAATTAAAAATAAAatttttatatt                >  1:4145817/1‑123 (MQ=255)
                                                                                                                  tAAAAAATAGCTTTTTTTTTTTTTTTTTTATATTTGAAAATATAATTTATTTATTTTTGTTTTTTAATAATGTAAAAAAATATAAAGTAAAAATAATTATTAAAAGTATTAAAAAAATTATTTAATGt               >  2:6430106/1‑128 (MQ=255)
                                                                                                                     aaaaTATCTTTTTTTTTTTTTTTTATATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATGGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaa            <  2:6986953/128‑1 (MQ=255)
                                                                                                                        aaaaaatagcttttttttttttttttATAATGTAAATAAAAATTTTAGTTATTTTTTTTTATAATTTTATAAAAAAATTTAAAGGAAAAAATATTTTTAAAAATAATAATAAAATTttttaattttaa            >  1:6342476/11‑128 (MQ=255)
                                                                                                                         aTAGCTTTTTTTTTTTTTTTTTTTTAATGGAAATTAAATTTTTTGTTTTTTTTTTTTATATTTATATAAAAAATTATAATGTAAAAATTATTGTTAAATTTATAAATAAAATTATTTAATTttaatta         >  2:3110852/1‑128 (MQ=255)
                                                                                                                         aTAGCTTTTTTTTTTTTTTTTTTAAAATTTAAAATTAAATTTTATTATTTTTTTTTTAAATTAAATAAAAAAAATAAAAAGTAAAAAAATTTTTTAAAAATAAAAATAAAATATTTTAaattaaatta         >  1:801465/1‑128 (MQ=255)
                                                                                                                          ttttttttttttttttttttttttATAATGGATATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAATAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt          <  2:1550378/123‑1 (MQ=255)
                                                                                                                          tAGCTTTTTTTTTTTTTTTTTATTAAGGTAATTAAAAATTTAAGGTATTTTTTTGTATAAGTATATAAAAAAATAAAAATTAAAAAATTTTTTTAAAAGTTAAATAAAAAATTTTAAATGttaataaa        >  2:5159859/1‑128 (MQ=255)
                                                                                                                                ttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACt    <  1:1000140/128‑1 (MQ=255)
                                                                                                                                 tttttttttttttatttATAATGGAAATATAAATTTTAGGTATTTTGTTTTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACtt   <  1:3621664/128‑1 (MQ=255)
                                                                                                                                  ttttttttttttttttATAATGGATATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  1:4976186/128‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                 
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.