New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 34949 =2119 (1.010)215 (0.110) 118/228 21.9 10.3% intergenic (+53/+113) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
?CP016816 = 34945 1818 (0.950)intergenic (+49/+117) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2348 total aligned reads displayed.

ACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTTATC  >  CP016816/34822‑35076
                                                                                                                                |                                                                                                                               
 cttattTATGAGTTTCAACAAAAATCGTAATAAATGATGAACCAATTAAAATGCTAAGGGAATTTTATTAATAATAAAACATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTTaaaaa                                                                                                                                <  1:795022/128‑1 (MQ=255)
      ttATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTAATTTTAATCATAATAAAAGTATAAACCAAAAAAATTTTGTTTTGTTTTTTTATTTTCATATTAaaaaaaaaaa                                                                                                                           >  2:1596831/1‑128 (MQ=255)
        ttgtttttAAAAAAAAATATTAATAAATTGTTAAACAAGTAAAATGCTAAGTGTATTTGATTAATAATAAAAGTTTAAACAAAATAAATTGTGTTTGGTTTTTTTTTTTACTATTGaaaaaaaaaaaa                                                                                                                         <  1:3487233/123‑1 (MQ=255)
        aTGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGATAATTTATTTACTATTGaaaaaaaaaaaa                                                                                                                         >  1:4303601/1‑128 (MQ=255)
           aGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGTTTTTTTATTTACTATTaaaaaaaaaaaaaaaa                                                                                                                      >  2:2807698/1‑128 (MQ=255)
           aGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGaaaaaaaaaaaaaaa                                                                                                                      >  1:2008292/1‑128 (MQ=255)
            gTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATTAATAATAAAATATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTACTATTTaaaaaaaaaaaaaata                                                                                                                     >  2:2473860/1‑126 (MQ=255)
            gTTTAAACAAAAAGAGTAATAAATGCTTAACCAAGTACAATGCTAAGTGATGTTGATGAATAATAAAAGATTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTAATATTTaaaaaaaaaaaaaata                                                                                                                     <  1:445311/128‑3 (MQ=255)
               tCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAataata                                                                                                                 >  2:4343371/1‑128 (MQ=255)
                 aacaaAAACTTTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATTAAAAATAAAATATTAAACCAAATAAATTGTTTTTGGTTTTTTTATTTACTATTTAAAAAAAAAAAAAataatata                                                                                                               <  2:1968722/128‑1 (MQ=255)
                  acaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTCGTTATTTTATTTACTATT‑‑AAAAAAAAAAAAAataatataat                                                                                                             >  1:2959541/1‑128 (MQ=255)
                  acaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGATAATTGAAGTTGATTAATAATAAAAGATTAAACCAAATTCATTGTTTTTGGTTTTTTTATTTACTATTTAAAAAAAAAAAAAataatataa                                                                                                              <  2:3489768/128‑1 (MQ=255)
                   caaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTACTATTGAAAAAAAAAAAAAaataaaaaaa                                                                                                              >  1:3197124/1‑123 (MQ=255)
                     aaaattgTAATAAATGTTTAACCAAGTACAATGCTAATGTAAGTTTATGAATAATAAAATATTAAACCAAATACATTTTGTTTGGTTTTTTTATTTACTATTG‑‑AAAAAAAAAAAAATAATATAATTTg                                                                                                          <  2:1534956/122‑1 (MQ=255)
                     aaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTAGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAAttt                                                                                                           >  1:2082408/1‑128 (MQ=255)
                        atagTAACAAATGCTGAACCAATTACAATGCTAAGTGAATTTTATTAATAATAAAATATTAAACCAAATAAATTGTTTTTGGTTTTTTTATTTAATATTGAAAAAAAAAAAAAATAATATAATTTGCa                                                                                                        <  2:4113163/126‑1 (MQ=255)
                         gagTAAGAAATGCTGAAACAAGTACAATGCTAAGTGAAGTTTATGAATAATAAAAGATTAAACCAAATACATTGAGTTTGGCTTTTTTATTAACTATTGAAAAAAAAAAAAAAATAATATAAtttaat                                                                                                        >  1:3396897/1‑125 (MQ=255)
                           gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTACTATTTAAAAAAAAAAAAAATAATTTAAattaaaaac                                                                                                     >  1:2260780/1‑122 (MQ=255)
                           gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑AAAAAAAAAAAAATAATATAATTTGCAAACt                                                                                                    >  2:744252/1‑128 (MQ=255)
                           gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATATACTATTGAAAAAAAAAAAAAAAAAAAAAAAttgcaaac                                                                                                      >  1:2521822/1‑122 (MQ=255)
                             aaGAAATGCTTAACCAAGTACAATGCTAAGTTAAGTTTATTAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑TAAAAAAAAAAAAATAATATAATTTGCATACtat                                                                                                  <  1:4042669/128‑1 (MQ=255)
                              cgAAATCCTGAACCACTCCAAATGCTAAGTGAAGTTGATGAATAATAAAAGATAAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑AAAAAAAAAAAAATAATATAATTTGCATACtata                                                                                                 <  2:3065798/127‑1 (MQ=255)
                              aGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATATAATTTGAATAatat                                                                                                  >  1:567924/1‑128 (MQ=255)
                                aaaTGCTTAACCAATTAAAATGCTAAGTGAATTTTATTAATAATAAAATATTAAAACAAATACATTGTGTTTGGTTTTTTTATTTACTATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATaa                                                                                                <  2:2723594/128‑1 (MQ=255)
                                 aaTTCTTAACCACTTACAATGCTAAGTGAAGTTGATTAATAATAAAATATAAAACCAAATACATTGGTTTTGGTTTTTTTATTTAAATTTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATaa                                                                                                <  2:292528/128‑1 (MQ=255)
                                  attcttaaCCAATTAAAATGTTAATTGTAGTTTATTAATAATAAAATATTAAACCAAAAACATTTTTTTTGGTTTTTTTATTTAATATT‑‑‑‑TAAAAAAAAAAATAATATAATTTGCATACTATAAAAAAt                                                                                           <  2:1320835/122‑1 (MQ=255)
                                  aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATaaaa                                                                                              >  2:4414512/1‑128 (MQ=255)
                                  aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATaaaa                                                                                              >  2:4265886/1‑128 (MQ=255)
                                   tGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATAAAATTTTAAAAATATaaaaa                                                                                             >  2:123810/1‑128 (MQ=255)
                                    gCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGATTGGTTTTATTATTTACTATTGAAAAAAAAAAAAAAATAATATAAATTGAATAATATaaaaa                                                                                             >  2:1912013/1‑128 (MQ=255)
                                     cgtgaCCAAGTACATTTCTATGTGAATTTTATTAATAAAAAAATATTAAACAAAATATATTGTGTTTGGTTTTTTTTTTAACTAATTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAAt                                                                                           <  1:913654/124‑1 (MQ=255)
                                          ccAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATAAAATTTAAAAAAAATAAAAAAtttttt                                                                                      >  1:2803101/1‑128 (MQ=255)
                                            aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAA‑‑AATATAATTTGCATACATAAAAAAATTGTTTTTc                                                                                   >  1:3647755/1‑128 (MQ=255)
                                            aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATATTATAATTTGAATACTATAAAAAAtttttttt                                                                                    >  2:1165709/1‑128 (MQ=255)
                                            aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACAAAATACATTGTGTTTGATTTTTTTATTTACTATTGAAAAAAAAAAAAAATAAAAAAATTTGAAAAAATAAAAAAATtttttta                                                                                   >  1:3576678/1‑127 (MQ=255)
                                              gTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑AAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTGTTTTTaaa                                                                                 >  2:2638297/1‑128 (MQ=255)
                                              gTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTTAAAAAAAAAAAAAATAAAATAATTTAAATAATATAAAAAATTTattttaa                                                                                  >  1:12225/1‑126 (MQ=255)
                                                    ttttaattttaGTTTATTAATAATATTATATTTAACAAAATAATTTTTTTTTTGTTTTTTTATTTATAATTTAAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTGTTTTTCAAATAAg                                                                            <  1:1133437/118‑1 (MQ=255)
                                                    tGCTAAGTTAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑AAAAAAAAAAAAATAATAAAATTTGAATAATATAAAAAATTTTTTTTAAAATaatt                                                                           >  1:2885746/1‑126 (MQ=255)
                                                     gctaattttaGTTTATTAATAATAAAAGTTTAAACTAAATAAATTTTTTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGt                                                                           <  1:3106678/119‑1 (MQ=255)
                                                           tGAAGTTTTTTAATAATAAAATATTAAACCAAATACATTTTTTTTGGTTTTTTTATTTAATATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAg                                                                     <  2:4188648/128‑1 (MQ=255)
                                                           tGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTAAAAATAAGTATTCAg                                                                     >  2:3674863/1‑128 (MQ=255)
                                                             aattttattaataatAAAAGATTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGa                                                                   <  2:1089483/119‑1 (MQ=255)
                                                             aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATATATTGCATAATATAAAAAATTTTTTTAAAAAAAATTAtaaaaaa                                                                   >  2:849063/1‑122 (MQ=255)
                                                             aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTTTTTTTCAAATAACTATTAAgta                                                                   >  2:1391549/1‑126 (MQ=255)
                                                               ttttattaataatAAAAGATTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGt                                                                 <  2:1474813/121‑1 (MQ=255)
                                                                tttattaataatAAAAGATTAAACCAAATAAATTGGGTTTGGTTTTTTTTTTTAATATTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGt                                                                 <  1:2597182/122‑1 (MQ=255)
                                                                    ttaataatAAAATATTAAACAAAATACATTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAAtt                                                            <  2:2548594/126‑1 (MQ=255)
                                                                     gaATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAATAAAATAATTTGCATAATATAAAAAATTGTTTTTCAAATAATTATTAAGTATAAAAtt                                                            >  1:2350449/1‑128 (MQ=255)
                                                                      aataatAAAATTTTAAAAAAAATAAATTTTGTTTGGTTTTTTTTTTTAATTTTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAAttt                                                           <  1:3884275/128‑1 (MQ=255)
                                                                         aataaAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTTTTTTTCAAATAATTATTAATGAGTAAATTTaaaa                                                       >  2:3419049/1‑128 (MQ=255)
                                                                           taaAAATTTAAACCAAATTAATTTTTTTTGTTTTTTTTATTTTATATTTAAAAAAATAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTaaaaa                                                      <  2:3155794/128‑1 (MQ=255)
                                                                             aaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAATAATATAATTTGAATACTATAAAAAATTTTTTTAAAAATAATTTATAATTATAAAATTTAAAAAAc                                                    >  2:921038/1‑128 (MQ=255)
                                                                             aaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGAATAATATAAAAAATTTTTTTTAAAATAATTATTCAGGATTAAATTTAAAAAAcc                                                   >  1:1075367/1‑128 (MQ=255)
                                                                              aataTTAAACAAAATACATTGTGTTTGGTTTTTTTATTTATTATT‑‑TAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCaa                                                 <  2:4533759/125‑1 (MQ=255)
                                                                               taaaaaaaCCAAACACATTGTATTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAATTAAGTATTCTGGTGTAATTTTAAAAAACCaa                                                 >  2:3573775/6‑128 (MQ=255)
                                                                               ataTTAAACAAAATAAATTTTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCa                                                  <  2:491623/126‑1 (MQ=255)
                                                                                 aTTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAATAATTTGCATACTATAAAAAATTATTTTTAAAATAAATAATAATGATTAAATATaaaaaaaaaaaa                                               >  1:2448317/1‑122 (MQ=255)
                                                                                 aTTAAACCAAATAAATTTTGTTTGTTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAaga                                               <  2:3873958/128‑1 (MQ=255)
                                                                                 aTTAAAAAAAATAAATTGTGTTTGTTTTTTTTTTTTAATATTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAag                                                <  2:3949702/128‑1 (MQ=255)
                                                                                   tAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAATTATTCATGAGTAAATTTAAAAAACaaatatt                                             >  1:1500101/1‑124 (MQ=255)
                                                                                   tAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑‑AAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGAAAATTTAAAAAACCAATAGTta                                           >  1:3784931/1‑128 (MQ=255)
                                                                                    attttttatattttGTTTTTTTTTTTTTTTTTTATTTTTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACAAAGAttt                                            <  1:2668616/116‑1 (MQ=255)
                                                                                    aaaCCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGTAGTAAATTAAAAAAACCAAGAGtt                                            >  1:3977077/1‑128 (MQ=255)
                                                                                      acaaaaTACATTTTTTTTGTTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTtat                                          <  2:1689989/125‑1 (MQ=255)
                                                                                      aaaaaaTACATTTTGTTTGGTTTTTTTATTTAATATTTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTta                                           <  2:3311851/125‑1 (MQ=255)
                                                                                      aCCAAAAACATTGTGTTTGGTTTTTTAATTTACTATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtat                                          <  1:490680/128‑1 (MQ=255)
                                                                                       ccAAATACTTTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                         <  1:2176030/128‑1 (MQ=255)
                                                                                       caaaataaatTGTTTTTGGTTTTTTTATTTAATATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                         <  2:1784682/126‑1 (MQ=255)
                                                                                       caaaaTATTTTGTTTTTTGTTTTTTTATTTTATTTTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                         <  1:157346/126‑1 (MQ=255)
                                                                                        cAAATACTTTTTGTTTGGGTTTTTTTTTTAAATTTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTtata                                         <  1:4136353/128‑1 (MQ=255)
                                                                                        cAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATATAATTTTCATAATATAAAAAATTTTTTTTAAAATAATTATTAATTATTAAATTTAAAAAAACAATATTTATaa                                        >  1:1694431/1‑128 (MQ=255)
                                                                                         aaaTACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAATTATTCAGGATTAAATTTAAAAAACCAAGAGTTAaaaa                                       >  1:1310611/1‑128 (MQ=255)
                                                                                          aaTACATTGTGTTTGTTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATaact                                      <  2:3763068/128‑3 (MQ=255)
                                                                                           taagatttggtttgtttTTTTTATTTAATATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATATAAAAAACCAAGAGTTATAAATc                                     <  2:2866201/119‑1 (MQ=255)
                                                                                                  tttttttGTTTTTTTAATTAATATAGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATAACTCTTGGttt                              <  2:660967/125‑1 (MQ=255)
                                                                                                  ttgtTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                              <  1:1422727/127‑1 (MQ=255)
                                                                                                    gtTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAATAATAAAATTTGCATACAATAAAAAATTGTTTTTCAAATAATTATTCAGTATTAAATTTAAAAAACAAATAGTAAAAAATAtttttttt                             >  1:1785308/1‑128 (MQ=255)
                                                                                                    gtTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTGTTTTTAAAATAATTATTCAGTAGTAAATTTAAAAAACCAAGATTTATAAATATTGtttttt                            >  1:3702234/1‑128 (MQ=255)
                                                                                                     tttGTTTTTTTTTTTTAAATTTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttttt                            <  1:4523187/128‑1 (MQ=255)
                                                                                                       tGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTTAATTTAAAAAACCAAGAGATATAAATCTTGCTTTTTTGt                         >  1:1001134/1‑128 (MQ=255)
                                                                                                       tGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGTGTTATAAATCTTGGtttttttt                         >  2:2087086/1‑126 (MQ=255)
                                                                                                       tGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACAAAGATTTATAAATATTTGTTTATTga                         >  2:1840640/1‑127 (MQ=255)
                                                                                                             ttttttttACTATTGAAAAAAAAAAAAAATAATATAATTTGCATACTTTAAAAAATTGTTTTTCAAATAAGTATTCAGTAGTAAATTTAAAAAACAAATAGTTATAAATCTTGGTTTTTTTTTTatat                   >  2:2400836/1‑128 (MQ=255)
                                                                                                             ttttATTTACTATTGAAAAAAAAAAAAAATTAATATATTTTGAATACTTTAAAAATTTGTTTTTAAATTAATTTTTAAGTATTAAATTTAAAAAAAAAATCTTTATAAATATTTTTTTTTTTTtatta                   >  2:403539/1‑126 (MQ=255)
                                                                                                                aatttaATATTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattat                <  1:4385403/127‑1 (MQ=255)
                                                                                                                    tttaatatttaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattatta              <  1:646274/118‑1 (MQ=255)
                                                                                                                    taCTATTGAAAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTTTTTTTAAAATAATTATAAAGGAGTAAATTTAAAAAACCAATAGTTATAAATATTGGTTTTTTTTTTAtattatttt             >  1:3033350/1‑126 (MQ=255)
                                                                                                                      cTATTGAAAAAAAAAAAAAAATAAAATAATTTGAATAAAATAAAAAATATTTTTTCAAAAAAATATTAAGTAATAAATTAAAAAAACCAATAATTATAAAAATTGGTTTTTTTTTTatatttatattt           >  1:1960787/1‑128 (MQ=255)
                                                                                                                       tcttttgaaaaaaataaaaaaTAATATAATTTGCATAATATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAATAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTAttt           <  2:3009244/121‑1 (MQ=255)
                                                                                                                          ttttaaaaaaaaaaaaaaTAATATAATTTGAATACTATAAAAAATTGTTTTTCATATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTc        <  2:3217522/124‑1 (MQ=255)
                                                                                                                          ttGAAAAAAAAAAAAAAATAATATAATTTGCTTACTTTAAAAAATTGTTTTTAAAATAAGTATTCAGGTTTAAATTTAAAAAACCAAGAGTTATAAATATTGTTTTTTTGTTGATTTTTTTATTTGtg        >  2:1013369/1‑127 (MQ=255)
                                                                                                                          ttGAAAAAAAAAAAAAAAAAATAAAATTTGAATAAAAAAAAAAATATATTTTAAAATAATTATTAAGAATTAAATAAAAAAAACAAAAAATAATAAATATTATTTTTTTTTTTAATATATTAttttta        >  1:1858204/1‑125 (MQ=255)
                                                                                                                          attgaaaaaaaaaaaaaaTAATATAATTTGCATACTTTAAAAAATTGTTTTTCAAATAAGTATTAAGGAGTAATTTTAAAAAACAAATATTTATAAATCTTGGTTTTTTGTTTTAATTATTATTTTTc        >  2:2186181/5‑128 (MQ=255)
                                                                                                                          attgaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTAATGATTAAATTTAAAAAACAAATATTTTTAAATATTGTTTTTTTGTTTTTTTTAtttttttta        >  2:2284002/5‑125 (MQ=255)
                                                                                                                          attcaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTc        <  2:575310/124‑1 (MQ=255)
                                                                                                                            ttgaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCATGAGTTATAAATCTTGGTTTTTTGTTTATTTTTTTATTTGTCtt      >  2:4473781/4‑128 (MQ=255)
                                                                                                                            ttaaaaaaaaaataaaTAATATATTTTGCATACTATAAAAAATTGTTTTTTAAATAAGTATTCAGGAGTATATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCtt      <  2:3629812/126‑1 (MQ=255)
                                                                                                                            tgaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCtt      <  1:4217039/126‑1 (MQ=255)
                                                                                                                                aaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTTAtc  <  2:203679/128‑1 (MQ=255)
                                                                                                                                |                                                                                                                               
ACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTTATC  >  CP016816/34822‑35076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.