New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =1435 (0.680)203 (0.110) 93/220 27.6 14.3% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 1171 (0.640)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1635 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                 |                                                                                                                                
 aattttcttttATTAATTTAACGCCCTTGTTTTTATTTATTACAAAATAAAAAAAATATCTTTTTATATATTTTTTGTATATGC‑AAATTTTTAAAAAAATAATTTGAACATTTAAAAAAAACC‑ttttt                                                                                                                                 <  1:1109210/121‑1 (MQ=255)
     tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttt                                                                                                                             >  2:371621/1‑128 (MQ=255)
       gtatCATTAATTTATCGCACTTGTATGAATTATTAAGAAACTAAAACTATTAACTTTTTATATATTTTTTTAATATGC‑AAATTTTTTAAAAATTAATTATAAATAGAAAAAAATATC‑ttttttttttt                                                                                                                           >  1:2286705/4‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑tttttttttttttt                                                                                                                        >  2:4479452/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttt                                                                                                                        >  1:4387862/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttt                                                                                                                        >  1:4180437/1‑128 (MQ=255)
          tCATTAATTTATAGCAATTGTATGAATTATTAATAAAATAAAAATAATATTTTTTTATTTATTTTTTTTATATTC‑AAATTTTTAAAAAATTAATTTGAACTTTTAAAAAAAAGC‑tttttttttttttt                                                                                                                        <  2:1211850/128‑1 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttt                                                                                                                      >  1:504797/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTAGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAATATAGC‑tttttttttttttttt                                                                                                                      >  1:1737922/1‑128 (MQ=255)
             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tatttattatttttatt                                                                                                                     >  2:1527900/1‑128 (MQ=255)
                aTTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGATCTTGTAAAAAATAGC‑ttttttttttttttttttat                                                                                                                  >  1:1646646/1‑126 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttttata                                                                                                                 >  2:2877592/1‑125 (MQ=255)
                   tATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTAGAACTTGTAAAAAATAGC‑tatttttttttttttttaaaatt                                                                                                               >  2:2469763/1‑122 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTtatttgaa                                                                                                            >  1:4274937/1‑123 (MQ=255)
                       tcACTTGTATGAATTATTAATAAAAAAAAAATATTATATTTTTATATATTTTTTTTATATTC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGa                                                                                                           <  2:2161988/127‑1 (MQ=255)
                        cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTtatttttaat                                                                                                          >  1:2178674/1‑121 (MQ=255)
                          cTTGTATTAATTATTAATAAACTAAAACTATTATATTTTTATTTATTTTTTTTATATTC‑AAATTTTTAAAAAATTAATTTTAACTTTTAAAAAAAAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAata                                                                                                       <  2:394783/128‑1 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAATAATGaaaaaa                                                                                                       >  1:1340140/1‑126 (MQ=255)
                             gTATTAAATATTAATAAAAAAAAAATATTATATTTTTTTATTTTTTTTTTATATTCTAAATTTTTAAA‑AAATAATATTAAATTTTAAAAAAAATC‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATaa                                                                                                    <  2:3568847/128‑1 (MQ=255)
                               ttgttattttaataaAATAAAAATATTTATTTTTTTTTTTTTTTTTTTTTATTT‑AAATTTTTTAAAAATTTATTTTTTATTTTTAAAAATATCTTTTTTTTTTTTTTTTTTTTATAATGGAAATATaa                                                                                                    <  1:572278/119‑1 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑TACTTTTTTTTTTTTTTTTAATATGTAAATATAAAtt                                                                                                 >  2:457117/1‑128 (MQ=255)
                                   atttataatcaacaaaaaataTTATCTTTTTATATATTTTTTTTATTTTC‑AAATTTTTTAATAATTTATTTTTACTTGTTAAAAATTTC‑‑CGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTa                                                                                              <  2:2949383/118‑1 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑AATGGAAATATAAATTTTa                                                                                              >  2:2544621/1‑128 (MQ=255)
                                    ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATATTAAAAATAAAAAATTTat                                                                                             >  2:1277468/1‑127 (MQ=255)
                                      attAAGAAAAAAAAACTATTATTTTTTTATATATTTTTTGTATATGA‑AAATTTTTAAAAAATTAATTTGAAATTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  2:300448/126‑1 (MQ=255)
                                       gTAAGAAAATAAAAATTTTATATTTTTAGATTTTTATTGTTTTTGT‑AAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  2:1931778/128‑1 (MQ=255)
                                         ataaaattaaaattaTT‑TTTTTTTTTATTTTTTTTTTTTATTT‑AAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAtttt                                                                                      <  1:1402300/125‑1 (MQ=255)
                                           gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATTAAAATATAATTTTTTGTtttttt                                                                                      >  1:3459218/1‑128 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAAAGTAAATATAAATTTTATGTAtttt                                                                                      >  1:1492331/1‑128 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGTAAATAAAAATTTTAGTTAttttt                                                                                     >  2:923062/1‑127 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTATATAATTATAATATAATTTTAATGttttttt                                                                                     >  1:2019470/1‑127 (MQ=255)
                                             aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTAtttttta                                                                                   >  2:2684949/1‑125 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATTTATTtttttg                                                                                  >  2:4033969/1‑128 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTATtttttttt                                                                                 >  2:3510995/1‑126 (MQ=255)
                                                taaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑AATTTAAAAATAAATTTTAGTTATtttttttt                                                                                 >  1:1156128/1‑126 (MQ=255)
                                                 aaaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTAttatttttta                                                                                >  2:4175708/1‑120 (MQ=255)
                                                 aaaaataTTTTTTTTTTATTTATTTTTTGTATATTC‑AAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTtgttgt                                                                                 <  2:4329270/128‑1 (MQ=255)
                                                  aaactaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATGTAATTATAATTTTTAGTTATTTTTTTGTCTa                                                                              >  1:3617131/1‑128 (MQ=255)
                                                     ctaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATATTTTAAAAAAAAATTTAATTTATTTTTTTTTATaat                                                                            >  1:1828760/1‑127 (MQ=255)
                                                     ctaTTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTATaat                                                                            >  2:2775514/1‑127 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAAAATGGAAATAAAAATTTTATTTAATTTGTTTTATAATTA‑t                                                                        >  1:2094509/1‑128 (MQ=255)
                                                             tttttAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAAGTTATAAATAATTTTTAGTAATTTTTTTGTAtaaata‑aataaa                                                                   >  1:4017812/1‑128 (MQ=255)
                                                               tttttttatTTTTTTTTTATTT‑AAATTTTTTAAAAATTTATTTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTaaaa                                                                  <  2:1740925/122‑1 (MQ=255)
                                                               tttAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑CTTTTTTTTTTTTTTTTATAATTGAAATTAAAATTTTATTAATTTTTTTTTATAATTA‑TATaaaaaa                                                                >  2:855990/1‑128 (MQ=255)
                                                                ttAGATATTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTAGTTATTTTTTTTTATAATTA‑Taaaaaaaa                                                                >  2:1449216/1‑128 (MQ=255)
                                                                   tttatTTTTTTTATATGA‑AATTTTTAAAATAATTAATTTTATATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAg                                                            <  1:2469763/126‑1 (MQ=255)
                                                                   tttatTTTTTGTATATGC‑AAATTTTTTAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGa                                                           <  2:1049387/126‑1 (MQ=255)
                                                                     tatttattTTTTAAGG‑AAATTTTTTAAAAATTTAATTTAACATTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTATATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGa                                                           <  2:3649006/128‑1 (MQ=255)
                                                                      atTTTTTTTTTATGA‑AAATTTTTAAAAAATTTATTTGAAATTTTAAAAAATA‑T‑ATTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGaa                                                          <  2:2213848/128‑1 (MQ=255)
                                                                       ttttttGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATATTTAAAATATAAATTTTTTGTTTTTTTTTTTAAAAGTA‑TATAAAAAAATATaaa                                                         >  1:4570760/1‑128 (MQ=255)
                                                                       ttttttGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTATTTTTTTTTTAATAATGAAAATATAATTTTTAGTTTTTTTGTTTACTAATTA‑AAAAAAAAAAttaaaa                                                         >  2:50049/1‑123 (MQ=255)
                                                                          ttagatatttc‑AAATTTTTTAAAAATTAATTTTTAATTTTTAAAAATA‑‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGaaa                                                    <  1:2731679/118‑1 (MQ=255)
                                                                            tGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTAAAATAAAATTTTTAGTTTTTTTTTTTTATATTTA‑TAAAAAAAAAAAAAAAGTaaa                                                    >  1:1003325/1‑128 (MQ=255)
                                                                                tatGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑ATTTTAAAATTAAATTTTAGTTTTTTTGTTTTATAAGTA‑TATAAAATAATAAAAATTAAAAAat                                                >  1:3731751/1‑128 (MQ=255)
                                                                                tatGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTTTTTTTTTGTAAAATTA‑TATAAAAAAAAAAAAATTaaaataat                                               >  1:2375405/1‑124 (MQ=255)
                                                                                 atGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGTTATTTTTTTGTATATTTT‑TATAAAAAAAAATAAAGAAAAAAaaat                                              >  1:2839950/1‑128 (MQ=255)
                                                                                    c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTAAATTTTAAATTTTTGGTATTTTGTTGTATATTTA‑TGTAAAAAAATAAAAAGTAAAAATTTTTg                                            >  2:1865153/1‑128 (MQ=255)
                                                                                    c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAT‑‑TGTAAATATAAATTTTAGTTATTTTTTTTTATAATTA‑TAAAAAAAAAAAAAATGTAAAAAAtttttt                                           >  1:907714/1‑126 (MQ=255)
                                                                                    c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATTATGGAAATATAAATTTTTGTTATTTTTTTGTATATTTT‑TATAAAAAAATATAAAGTAAAAAATAttt                                            >  2:3372509/1‑127 (MQ=255)
                                                                                    c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATTTAAAAATAAATTTATGGTATTTT‑TTTTTTAAATATTGAAAAAAAATTAAAAGGAAAAAATAtttt                                           >  1:2923548/1‑126 (MQ=255)
                                                                                      aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑ATGTAAATATAAATTTTAGGTATTTTTTTTTATTATTA‑TATAAAAAAATATAAATGAAAAAATATtttt                                          >  2:3109804/1‑128 (MQ=255)
                                                                                       aaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGCAAATATAAATTTTAGTAATTTTTTTGTATAATTA‑TAAAAAAAAATATAAAGGAAAAAATATTTTTa                                         >  1:806011/1‑128 (MQ=255)
                                                                                        tttttTAAAAAATTAATTTTAAATTGTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTaa                                        <  2:4403185/127‑1 (MQ=255)
                                                                                        aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATGAATTTTTTTGTCAAATAA‑TAAAAAAAAAAATAAATAAAAAAATAtttataa                                        >  1:2980441/1‑123 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTATATGTA‑TATAAAAAAATTTAATTGAAAAAATATTGTTAAAAGTAATag                               >  2:1138657/1‑127 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGTTTTTTTTTTTTCTATTTA‑AAAAAAAAAATATAAAGGAAAAAAAAAAGTTAAAATTAATaa                               >  1:1261900/1‑127 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTGTTGTATAATTA‑TATAAAAAAATAGAAAGGAAAAAATATTGTTAAAATTAATaa                               >  2:3888184/1‑127 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TATTGGTATTATTTATTTTATTTTTTTTTTTTTATTATTT‑TCTAAAAAAATAAATATAAAAAAATATT‑TTAAAAATataaaaa                             >  1:4091976/1‑122 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAAATTTTTTTTTTTTTTTTTTTAAAAATA‑TATAAAAAATTAAAAAGTTAAAAATATTTTTAAaataaataat                              >  1:255521/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAATTTTTAGGTATTTTGTTGTCTATGTA‑TATAAAAAAATATAAATTAAAAAATTTTTTTAAAATTAATaaa                              >  1:3860074/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGGAAATAAAAATTTTATGTATTTTTTTGTATAATTA‑TAAAAAAAAATATAAAGGAAAAAATTTTTTTAAAAGTAATaat                              >  1:96957/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAAATGGAAATATAAATTTTAGGTATTTTGTTTGAAAATTA‑AATAAAAAAATATAAAGTAAAAAATTTTTTTAAAATTAATaat                              >  1:2631927/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTGTCAAATTA‑TATAAAAAAATATAAAGGAAAAAATATTGTTAAAAGTAataata                             >  2:3433001/1‑128 (MQ=255)
                                                                                                    ttaattTTAAATTTTTAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTaa                            <  1:3088070/128‑1 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATTTAAATTTTTTTTTTTTTGTTTTAAATTTT‑TATAAAAAAATATAATTAAAAAAATATTTTTAAAATTAATaaaa                             >  2:1640889/1‑125 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATATAAAAATAAATTTTTTTTTTTTTTTTTTGTAAATT‑TAAAAAAAAAAAAAAAAAAAAAAAAATTTTTtaaaaataaaata                             >  1:3800819/1‑119 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAAATAAATTTTAGTTTTTTTTTTTTATATTTT‑TAAAAAAAAATATAAAGGAAAAATTATTTTTAAAATTAAAAATaa                            >  2:4265142/1‑128 (MQ=255)
                                                                                                     taattTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTaaa                           <  2:2372631/128‑1 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGTAAATATAAATTTTAGGTATTTTTTTGTATAATTA‑TATAAAAAAATAAAAAGGAAAAAATATTTTTAAAATTAAAACTaa                            >  2:3765607/1‑128 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGTATAATTA‑TATAAAAAAATATAAAGGAAAAAATATAGTTAAATGTATTACTaa                            >  2:737772/1‑128 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTGTTGTCTATGTT‑TCTAAAAAAATATAAAGTATAAAATATTTTTAAAATTAATACTaa                            >  2:2277999/1‑128 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGTATAAGTA‑TAAAAAAAAATAAAAAGAAAAAAATATTTTAAAAAGTAAAAATaa                            >  1:3374399/1‑128 (MQ=255)
                                                                                                       attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATTGAAAAATAAATTTTAGGTATTTTTTTTTATAATTA‑TCTAAAAAAAAAGAAAGAAAAAAAAATTTTTAAAATTAATAATAAAat                         >  1:3236058/1‑128 (MQ=255)
                                                                                                       aatttaaattttAAAAAATATC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAat                         <  2:1365883/117‑1 (MQ=255)
                                                                                                        tttttatttttAAAAAATATC‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAat                         <  1:3671614/118‑1 (MQ=255)
                                                                                                          ttaaattttAAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAatta                       <  1:1585580/120‑1 (MQ=255)
                                                                                                           gAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATTTATTTTTTTTTATATTTA‑TATTAAAAAATTTAAATGAAAAAATATTTTTAATATTAATAAAAAAaatat                      >  2:665387/1‑128 (MQ=255)
                                                                                                            taattGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAattatt                     <  2:4098988/125‑1 (MQ=255)
                                                                                                               ttGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTTTTTTTTTGTATAAGTA‑TATAAAAAAATATAATGGAAAAAATATTTTTAAAATTATAAAAAAAATTATATaa                  >  1:3938928/1‑128 (MQ=255)
                                                                                                                tGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATTTTTGAAAAATTAATTTTATGTTTTTTTTTTAATAAGTA‑TAAAAAAAAATAAAAAGGAAAAAATTTTTTTAAAATTAATTCTAAAATTATTTAAt                 >  2:261321/1‑128 (MQ=255)
                                                                                                                     aaaaTAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGGAAAAATAAATTTTAGTTATTTTTTTTAAAAATTA‑TATAAAAAAATAAAAAGAAAAAAAAATTTATAAAATAAATAATAAAATTATTTAATTttaa            >  1:35559/1‑128 (MQ=255)
                                                                                                                      aaaaaatttctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtta             <  2:558000/118‑1 (MQ=255)
                                                                                                                      aaaTAGC‑TTTTTTTTTTTTTTTTTTTATAATGTAAAAAAAAATTTTATTTATTTTTTTTTATAATTA‑TAAAAAAAAAAATAAATAAAAAAATATTTTTAAAATTAATAATAAAATTATTTAATTttaa            >  1:679053/1‑128 (MQ=255)
                                                                                                                      aaaTAGC‑TTTTTTTTTTTTTTTTTTT‑TATTGGAATTTAAAATTTTAGGTATTTTTTTTTAAAATTT‑AATAAAAAAATAAAAAGAAAATAATATTTTATAAATTTATAATAAAATTATTTAAtttatat           >  1:1946117/1‑122 (MQ=255)
                                                                                                                          tttatttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:1989436/124‑1 (MQ=255)
                                                                                                                          attttttttttttttttttttttATAATTTAAATATAAATTTTATTTATTTTTTTGTATAAGTA‑TATAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:3272464/124‑1 (MQ=255)
                                                                                                                          atatattttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATAATGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:382707/123‑1 (MQ=255)
                                                                                                                          atagtttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TATAAAAAAATACAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  1:4480487/124‑1 (MQ=255)
                                                                                                                                tttttttttttttttttATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TATAAAAAAATAGAAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACtt   <  2:2069627/128‑1 (MQ=255)
                                                                                                                                 ttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTTAGTA‑TCTAAAAAAATAGAAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  2:3192941/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGC‑AAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTA‑TCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.