New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 34945417 (0.520)275 (0.310)
+AAA
83/214 21.2 37.8% intergenic (+49/+117) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
?CP016816 34946 = 452 (0.500)intergenic (+50/+116) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 692 total aligned reads displayed.

CTTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTT  >  CP016816/34818‑35072
                                                                                                                                      |                                                                                                                                      
 tttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTTAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTAGATTTTTATATTT‑ACTA‑TA‑‑‑G‑‑‑‑a                                                                                                                                   >  2:168671/1‑128 (MQ=255)
  ttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGAG‑TTTAGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑a                                                                                                                                 >  2:1840221/1‑128 (MQ=255)
         tttATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaa                                                                                                                          >  2:552453/1‑128 (MQ=255)
           ttccgatctCAACAAAAATATTAACAAATTCTTAACCAATTACAATGCTAATTTAATTTTATTAAAAATAA‑AATATTAAACAAAATACATTTTG‑TTTGGTTTTTTTATTT‑ACTT‑TT‑‑‑T‑‑‑‑a‑aaaaaaaaaa                                                                                                                        <  2:623945/120‑1 (MQ=255)
           tATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaa                                                                                                                        >  1:1920857/1‑128 (MQ=255)
           tATGAGTTTAAACAAAAAGAGTAAGAAATGATGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACAAAATACATAGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaa                                                                                                                        >  1:453032/1‑128 (MQ=255)
            aTGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑T‑‑‑‑a‑aaaaaaaaaaa                                                                                                                       >  2:1263106/1‑128 (MQ=255)
               aGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGAG‑TATGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaaaaaa                                                                                                                    >  1:738100/1‑128 (MQ=255)
                  ttCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGATTTTTTTATTT‑ACTA‑TT‑‑‑T‑‑‑‑a‑aaaaaaaaaaaaaaaat                                                                                                                 >  2:1189425/1‑125 (MQ=255)
                    caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaaaaaaaaaat                                                                                                               >  2:1585676/1‑126 (MQ=255)
                    caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaaaaaaaaaaa                                                                                                               >  2:1293028/1‑126 (MQ=255)
                    caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGATAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTAGGTTTTTTTATTT‑ACTA‑TT‑‑‑T‑‑‑‑a‑aaaaaaaaaaaaaaaaaaa                                                                                                               >  2:133127/1‑126 (MQ=255)
                     aacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaaaaataaaaaa                                                                                                              >  2:747154/1‑121 (MQ=255)
                      aaaaaaaTATTTAGAAATGTTTAACCATTTAAAATTTTAATTTATGTTTTTTAAAAATAA‑AATATTAAACAAAATTAATTGTT‑TTTGGTTTTTTTTTTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAataatat                                                                                                              <  1:548497/126‑1 (MQ=255)
                       caaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑TAAAAAAAAAAAaa‑aataaa‑a‑t                                                                                                         >  1:1636123/1‑128 (MQ=255)
                        aaaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAataatata‑a                                                                                                           >  2:428035/1‑128 (MQ=255)
                        aaaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAaaaaaaaa‑a‑t                                                                                                         >  2:1455309/1‑128 (MQ=255)
                         aaaaTAGTAAGAAATGCTGAACCAAGTAAAATGCTAAGGGAAGTTGATTAATAATAA‑AACATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑AATA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑tt                                                                                                        <  2:1512378/128‑1 (MQ=255)
                         aaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAataatata‑a                                                                                                           >  2:1969881/1‑128 (MQ=255)
                            agagTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑a‑aaaaaaaaaaaaaaaaaaaaaaatttt                                                                                                       >  1:1119404/1‑118 (MQ=255)
                                taataaATGCTTAACAAAGAACAATGCTAATTTAATTTTATGAAAAATAA‑AATATAAAACCAAATACTTTGTG‑TTTGGTTTTTTAATTT‑ACAA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATa                                                                                                  <  2:1409285/128‑1 (MQ=255)
                                  attaaTGCTGAAACAAATACAATTGTAATGTTATTTGTTTAATAATAA‑AATATTAAACCAAATACATTTTG‑TTTGGTTTTTTTTTTT‑AATT‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACta                                                                                               <  1:1770220/125‑1 (MQ=255)
                                  aaaaaTGATGAACAAAGTACAATGCTAAGTGAAGTTGTTTAATAATAA‑AATTTTAAACCAAATACATTGTG‑TTTGGTTTTTTTTTTT‑AATA‑TT‑‑‑‑‑‑‑‑T‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACtat                                                                                              <  1:1006183/126‑1 (MQ=255)
                                   taaaTGGTGAACCAATTACAATTCTAATTTAAGTTTATTAATAATAA‑AATATTAAACCAAATACATTTTT‑TTTGGTTTTTTTTTTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACta                                                                                               <  1:685607/127‑1 (MQ=255)
                                    aaaTGCTTAACCAAGTAAAATTTTAAGTTAAGTTTATTAATAATAA‑AATATTAAACAAAATAAATTGTG‑TTTGGTTTTTTTATTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACtat                                                                                              <  2:1491509/128‑1 (MQ=255)
                                    aaaTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAATAAA‑A‑TTTGAATAAtata                                                                                             >  2:171253/1‑128 (MQ=255)
                                     aaTGCTGAACCTAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTTAATAatat                                                                                              >  2:649749/1‑128 (MQ=255)
                                     aaTGATCAACAAATTAAAATTCTAAGTTAATTTTATTAAAAAAAA‑AACATAAAACCAAATAATTTGTG‑TTTGGTTTTTTTATTT‑AATT‑TTTA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACtat                                                                                              <  2:100188/128‑1 (MQ=255)
                                      aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAAAATA‑A‑TTTGCATACtata                                                                                             >  1:1477549/1‑128 (MQ=255)
                                      aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTTAATAATATaa                                                                                            >  1:911734/1‑128 (MQ=255)
                                       tGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAAAAAA‑A‑ATTAAAAAATATaaaa                                                                                          >  1:1387810/1‑128 (MQ=255)
                                             aCCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑T‑TTTGAATAATATAAAAAATTg                                                                                     >  1:520438/1‑128 (MQ=255)
                                              ccAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGTTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TATAAATAAAATaaaaaaattt                                                                                    >  1:334034/1‑124 (MQ=255)
                                                  ttaaaaTGCTATTTGAATTTGTTTAATAAAAA‑AAAATTAAAAAAAAAACATTTTT‑TTTGGTTTTTTTATTT‑AATA‑TTTAAA‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGttt                                                                                  <  2:834477/124‑1 (MQ=255)
                                                  gTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAAAAAAAAATA‑TTTTCAAAAAAAAAAAAATTAttttt                                                                                >  1:1240088/1‑128 (MQ=255)
                                                  gTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TTTGCATAAAATAAAAAATTTTTTTTc                                                                               >  2:86617/1‑128 (MQ=255)
                                                       aTGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTAAATAAAATAAAAAATTTTTTTTAAAAt                                                                           >  1:1729237/1‑128 (MQ=255)
                                                        tGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑‑‑‑AAAAAAAAAAAAATAATATA‑A‑TTTGCATAATATAAAAATTTGTTTTTCAAATaatt                                                                       >  2:1863238/1‑126 (MQ=255)
                                                          cTAAGTTAATTTTTTGATTAAAAA‑AATTTTAAACAAATTAATTTGTT‑TTTGGTTTTTTTTTTT‑ATTATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATATTATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAg                                                                        <  1:36064/128‑1 (MQ=255)
                                                          cTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TTTGATAACTTTAAAAAATTGttttaaaattact                                                                        >  1:1049970/1‑119 (MQ=255)
                                                                taaGTTTATTAATAAAAA‑AATATTAAAAAAAAAAAATTTTT‑TTTGTTTTTTTTTTTT‑AATA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAg                                                                 <  2:346308/127‑1 (MQ=255)
                                                                 atgTTTATTAATAATAA‑AATATTAAACCAAATAAATTGTT‑TTTGGTTTTTTTATTT‑AATA‑TTTA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCa                                                                  <  2:394169/126‑1 (MQ=255)
                                                                    ttttttattaataa‑AATATTAAACAAAATA‑ATTTTGTTTTGGTTTTTTTATTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAg                                                              <  2:1092869/120‑1 (MQ=255)
                                                                    ttGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAAAAAAAAA‑A‑ATTACATAATAAAAAAAATTTTATTTAaaaaaataataaattta                                                              >  1:571760/1‑117 (MQ=255)
                                                                    ttGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TA‑‑‑GAA‑‑A‑AAAAAAAAAAAAAAAAAAATA‑A‑TATAAATAATAAAAAAAAATATTTTTAAAAAAATAATTCaaaa                                                               >  1:639494/1‑125 (MQ=255)
                                                                     tttattataataataataTTAAACCAAATAAATTGTG‑TTTTGTTTTTTTATTT‑ATTT‑TTTA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGa                                                               <  1:1271561/122‑1 (MQ=255)
                                                                      gatgaATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGAATAATAAAAAAAATTTTTTTTCAAATAATTATTAAgtatta                                                            >  1:156479/1‑123 (MQ=255)
                                                                       tttcctatcta‑aaGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTaa                                                           <  2:47464/118‑1 (MQ=255)
                                                                            taataa‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TTTGAATAATATAAAAAATTTTTTTTCAAATAATTATTAATAAATAAAttt                                                       >  1:1139462/1‑128 (MQ=255)
                                                                             aataa‑AAGATTAAACCAGATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑T‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTaa                                                     >  2:1731427/1‑128 (MQ=255)
                                                                             aataa‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTTAATAATATAAAAAATTTTTTTTAAAATAATTATTAATTAATAAATTTa                                                      >  2:297875/1‑128 (MQ=255)
                                                                             aataa‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑‑‑‑AAAAAAAAAAAAATAAAATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCATCATTAAATTaaaaaa                                                  >  1:237737/1‑128 (MQ=255)
                                                                              ataa‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCAAACAATAAAAAATTTTTTTTAAAATAAGTATTAAGTATTAAATTTaa                                                     >  1:1703767/1‑128 (MQ=255)
                                                                              aataaatttttAAAAAAAATAAATTTTG‑TTTTTTTTTTTTATTTAATTT‑TT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTaa                                                     <  1:1585676/119‑1 (MQ=255)
                                                                                 a‑aaGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTTTTTTTCAAATAATAATTCAGGATTAAATTTAAAAAAc                                                >  2:1372947/1‑128 (MQ=255)
                                                                                     taTTAAAACTAATAAATTTTT‑TTTTTTTTTTTTATTT‑ATTATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCATGAGTAAATTTAAAAAACCa                                              <  2:1952012/127‑1 (MQ=255)
                                                                                     gATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAAAAA‑AAAAAAAAAAAAAATATTATA‑A‑TTTTAATAATAAAAAAAATTATTTTAAAAATAATTATAAATTATTAAATTTaaaaaa                                                 >  2:202879/1‑128 (MQ=255)
                                                                                      aTTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGAATAATATAAAAAATTTTTTTTAAAATAATAATTAATTATTAAATTTAAAAAACaaa                                             >  1:1353779/1‑128 (MQ=255)
                                                                                       tttaaaaaaaTACTATGTT‑TTTGGTTTTTTTATTT‑AATA‑TTAA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCaa                                             <  1:97445/121‑1 (MQ=255)
                                                                                        tAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑TCTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGAATAATATAAAAAATTTTTTTTAAAATAATTATTAAGTATTAAATTTaaaaaaaaaaa                                            >  2:1113369/1‑123 (MQ=255)
                                                                                         aaaCCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TTTTCATAAAATAAAAAATTTTTTTTCAAAAAATTAATAATAATTAAAATTAAAAAACCaaaat                                          >  1:1205563/1‑125 (MQ=255)
                                                                                           acaaaaTACATTGTG‑TTTGGTTTTTTTATTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAttt                                        <  1:1794310/125‑1 (MQ=255)
                                                                                             caaattatttGTG‑TTTGGTTTTTTAATTA‑AATA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                     <  2:1039655/120‑1 (MQ=255)
                                                                                             cAATTAAATTTTG‑TTTGTTTTTTTTATTT‑AATA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                     <  2:1919870/128‑1 (MQ=255)
                                                                                             aaaaTATATTGTG‑TTTGGTTTTTTTATTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtat                                      <  1:1671987/127‑1 (MQ=255)
                                                                                              ataTACTTTTTG‑TTTGTTTTTTTTATTTAATTT‑TT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                     <  1:838545/126‑1 (MQ=255)
                                                                                              aaataaatTTTT‑TTTTTTTTTTTTATTT‑ACAA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATaa                                    <  2:1778405/128‑1 (MQ=255)
                                                                                              aaaTACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAAA‑A‑AAAAAAAAAAAAAAAAAAATA‑A‑TTTTCATAATAAAAAAAAATTTTTTTAAAAAAATTATTAAGTATTAAATTTaaaaaaaaaaaaataa                                       >  2:269386/1‑118 (MQ=255)
                                                                                              aaaTACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGAATACTATAAAAAATTTTTTTTAAAATAAATATTAATTATTAATTTAAAAAAACCAAAAGTtat                                      >  1:1511372/1‑128 (MQ=255)
                                                                                              aaaTACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TTTGAATAATATAAAAAATTTTTTTTCAAAAAATAATTAAGTATTAATTTTAAAAAACAAAAATTtat                                      >  1:1834254/1‑128 (MQ=255)
                                                                                               aaaaaaTTTTG‑TTTTGTTTTTTTATTT‑AATA‑TTTA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                     <  2:687598/123‑1 (MQ=255)
                                                                                               aaTACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATAATATAAAAAATTTTTTTTCAAATAATTATTAAGGAGTAAATTTAAAAAACAAAGAGTTATaaa                                   >  2:162389/1‑128 (MQ=255)
                                                                                               aaTACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAAATATATA‑ATTTTGAATAAT‑TAAAAAATTTTTTTTAAAAATAATTTTAAAGTATAAATTTTAAAAAACaaatatattaaa                                   >  2:508276/1‑118 (MQ=255)
                                                                                                aaaCATTTTG‑TTTGGTTTTTTTTATA‑ACTA‑TTTAAA‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                     <  2:1562732/126‑1 (MQ=255)
                                                                                                  aaaTTGTT‑TTTGGTTTTTTTATTT‑AATA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCt                                <  2:1431304/126‑1 (MQ=255)
                                                                                                   taTTTTG‑TTTGGTTTTTTTTTTT‑AATA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCtt                               <  1:388744/127‑1 (MQ=255)
                                                                                                    tttGTG‑TTTTGTTTTTTTATTT‑ATTA‑TT‑‑‑T‑‑‑‑ATAAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCtt                               <  1:788063/127‑1 (MQ=255)
                                                                                                    attttttttttttttttttATTT‑AATA‑TTTTAA‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTTCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAAt                                  <  1:290991/116‑1 (MQ=255)
                                                                                                     ttGTG‑TTTGTTTTTTTTTTTT‑ATAATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAAGTGTATTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTg                              <  2:1814405/128‑1 (MQ=255)
                                                                                                      tgtg‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAAA‑A‑AAAAAAAAAAAAAAAAATAAA‑A‑TTTGCATAAAAAAAAAAATTTTTTTTAAAAAAATTATTAAGGAGTAAATTTAAAAAACCAATATTTATTAAACtt                               >  1:1305492/1‑128 (MQ=255)
                                                                                                        tttttttttttttttATTT‑TAAA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGtt                           <  2:1132180/120‑1 (MQ=255)
                                                                                                        ttttttGTTTTTTTTATTT‑AATA‑TT‑‑‑G‑‑‑‑‑‑‑AAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGtttt                         <  2:766438/125‑1 (MQ=255)
                                                                                                        tg‑tTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑GAAA‑A‑AAAAAAAAAAAAAAAAATATA‑A‑TTTGAATAATAAAAAAAATTTTTTTTAAAAAAATTATAAATAATTAAATTAAAAAAAAAAAAATTTATAAAtaatgt                             >  2:899747/1‑123 (MQ=255)
                                                                                                         g‑tTTGG‑TTTTTTATTT‑ACTA‑TT‑‑‑GAAA‑A‑AAAAAAAAAAAAAAAAAAATA‑A‑TTTGAATAAAATAAAAAATTTTTTTTCAAATAAGAATTCAGGATTAAATTTAAAAAACAAAGAGTAATaaaaattgttt                           >  1:1871890/1‑120 (MQ=255)
                                                                                                          ttttGTTTTTTTTATTT‑AATATTT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                          <  2:369130/127‑1 (MQ=255)
                                                                                                           ttttGTTTTTTTATTT‑AATT‑TTTA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                          <  2:1066533/128‑1 (MQ=255)
                                                                                                           tttGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑‑‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTTTTTTTCAAATAATTATTCAGGAGTAAATTTAAAAAACAAATAGTTATAAATATTGGtttttt                       >  2:1656153/1‑128 (MQ=255)
                                                                                                            tttgTTTTTTTATTT‑ATTT‑TTTA‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGtttt                         <  1:1449386/125‑1 (MQ=255)
                                                                                                            ttGGTTTTTTTATTT‑ACTA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAAAAAAATA‑A‑TTTTAAAAAAATAAAAAATTTTTTTTAAAAAAATTAATAATTATTAAATTTAAAAAAACAAAATTTATAAAtaatttttttt                        >  1:599720/1‑118 (MQ=255)
                                                                                                               ttttttttATTT‑AATATTT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑ATTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGt                     <  2:70173/127‑1 (MQ=255)
                                                                                                                ttttttttttA‑ATTT‑TT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGttt                   <  1:427110/128‑1 (MQ=255)
                                                                                                                 ttttttATTT‑ACTA‑TT‑‑‑GAAAAA‑AAAAAAAAAAAAAATAAAATA‑A‑TTTGCAAAATATAAAAATTTTTTTTTAAAAAAATTTTTATTTATTAATTTTAAAAAACAAATAGTTATTAAAGTTGTTTTTTTg                      >  1:1965051/1‑128 (MQ=255)
                                                                                                                 ttttttATAA‑AATT‑TT‑‑‑A‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTta                  <  1:1079729/128‑1 (MQ=255)
                                                                                                                   ttttATTT‑ACTA‑TT‑‑‑GAAA‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGAATAATATAAAAAATTGTTTTTAAAATAATTATAAATTATTAAATTTAAAAAAACAATATTTATAAATAtttttttttttttt                   >  2:794913/1‑128 (MQ=255)
                                                                                                                   ttttATTT‑ACAA‑TT‑‑‑GA‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTtat                 <  2:937716/128‑1 (MQ=255)
                                                                                                                    tttattt‑aCTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACAATAAAAAATTGTTTTACAAAAAATTATTAATAATTAAATTAAAAAAAACAAAATTTATAAATATTGGTTTTTTGTTtat                 >  1:1607133/1‑128 (MQ=255)
                                                                                                                       attt‑aCTA‑TT‑‑‑G‑‑‑‑A‑AAAAATAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattat            <  2:1237786/128‑1 (MQ=255)
                                                                                                                         tt‑aCTA‑TT‑‑‑G‑‑‑‑‑‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATAATATAAAAAATTTTTTTTAAAATAATTATTAATGAGTAAATTTAAAAAACAAAATGTTTAAAATATTGGTTTTTTTTTTAtatttttat         >  2:605729/1‑128 (MQ=255)
                                                                                                                          t‑aCTA‑TT‑‑‑GAA‑‑A‑AAAAAAAAAAAAAAAAAAATA‑A‑TTTTCATAATATAAAAAATTTTTTTTAAAATAATTATTAAGGATTAAATTTAAAAAACCAAAAGTTATAAATATTGTTTTTTTTTTTAtattatt           >  1:1947307/1‑128 (MQ=255)
                                                                                                                           taatA‑TT‑‑‑T‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattattat         <  1:208466/125‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                      
CTTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTTGGTTTTTTTATTT‑ACTA‑TT‑‑‑G‑‑‑‑A‑AAAAAAAAAAAAAATAATATA‑A‑TTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTT  >  CP016816/34818‑35072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.