New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =545 (0.600)107 (0.140) 47/218 35.8 18.5% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 466 (0.590)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 635 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                |                                                                                                                                   
atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCtttt                                                                                                                                     >  2:537558/1‑128 (MQ=255)
   tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttt                                                                                                                                  >  1:1965527/1‑128 (MQ=255)
          tCATTAATTTTTCGCACTTGTATGAATTATTAATAAAAAAAAAAAATTATCTTTTTATATATTTTTTGTATATTCAAATTTTTAAAAAAATA‑ATTTTAAATTGTAAAAAAAACCtttttttttttttt                                                                                                                           <  2:935701/128‑1 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCtttttttttttttt                                                                                                                           >  2:1115992/1‑128 (MQ=255)
           cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttttttttttt                                                                                                                          >  1:889630/1‑128 (MQ=255)
           cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttttttttttt                                                                                                                          >  1:1668756/1‑128 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCtttttttttttttttttttta                                                                                                                    >  1:689983/1‑126 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttttttttttttttata                                                                                                                    >  2:287749/1‑125 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttttttttttttttaaa                                                                                                                    >  2:157568/1‑125 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCtttttttttttttttttaaaa                                                                                                                    >  2:244927/1‑124 (MQ=255)
                   tATTGCACTTTTATTAATTATTAAGAAAATAAAACTATTATATTTTTACATATTTTTTGTATATTCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAAAAGCTTTTTTTTTTTTTTTTtataaag                                                                                                                  <  2:771311/128‑4 (MQ=255)
                    atccgaCTTGTATTCAATAGTAACCAAATAAAACAATTTTCTTTTTATATATTTTTTGTATATGCAAATTTTTAAAAAAATA‑AATTGAAATTTTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATg                                                                                                                <  1:1874698/123‑1 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttttttttttttataattaaaa                                                                                                               >  2:4886/1‑118 (MQ=255)
                        cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCttttttttttttttttttatatgtaaat                                                                                                             >  1:1757899/1‑118 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTTAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatttaaataa                                                                                                           >  1:1259894/1‑118 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATATTGGAAat‑a                                                                                                         >  2:1853045/1‑128 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATTTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTGAAat‑at                                                                                                        >  2:1204807/1‑128 (MQ=255)
                            tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTaaattgaaaaa                                                                                                         >  2:1596155/1‑119 (MQ=255)
                              tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATTGAAAT‑TTaaa                                                                                                     >  2:1933924/1‑128 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAATTGTAATt‑atata                                                                                                     >  1:230019/1‑126 (MQ=255)
                                ttaaTTATTAATAAAATAAAACTATTATTTTTTTATATATTTTTTTTTTATGTAAATTTTTAAAAAATTA‑ATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAAtt                                                                                                   <  1:1628037/126‑1 (MQ=255)
                                tGACTTTGTAAGAAAATAAAAATATTTTCTTTTTTTTTATTTTTTTTATTTGCAAATTTTTAAAAAATTA‑AATTTTACTTTTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAAtt                                                                                                   <  1:1333142/128‑1 (MQ=255)
                                tGAAATATTAATAAACAAAAAATAATATCTTTTTATATATTTTTTGTATTTGTAAATTTTTAAAAAATTA‑ATTTTAACTTTTAAAAAA‑ATTCTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAAtt                                                                                                   <  2:1422680/128‑1 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTatt                                                                                              >  2:1628037/1‑126 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAgtt                                                                                             >  2:684078/1‑126 (MQ=255)
                                       gTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTTAAAT‑ATAAATTTTattttt                                                                                           >  1:1003842/1‑123 (MQ=255)
                                        taataaaaaaaaactaATATCTTTTTTTATATTTTTTTTTTAATAAAATTTTTAAAAAATTA‑ATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTAt                                                                                           <  2:1136104/119‑1 (MQ=255)
                                        taataaACAAAAACTATTATCTTTTTTTATATTTTTTTTATATTCAAATTTTTAAAAAATTA‑ATTTTCACTTTTAAAAAAAATCTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTa                                                                                            <  1:243524/128‑1 (MQ=255)
                                        tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTAATGTAt                                                                                           >  1:1124465/1‑128 (MQ=255)
                                        tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTAttt                                                                                         >  1:1201466/1‑128 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAATT‑AAAAATTTtatttatt                                                                                          >  2:577064/1‑128 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTTTAATT‑ATAAATTTTAGTtttttt                                                                                        >  2:1917133/1‑128 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAT‑‑TTTAAAT‑ATAAATTTTATGTAtttttt                                                                                      >  1:1722134/1‑126 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAT‑AAAAAATATAGTTAtttta                                                                                       >  2:663087/1‑127 (MQ=255)
                                             aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAG‑ATTATTTTTTTTTTTTATTATAATTTAATA‑ATAAATtatatttaattttt                                                                                      >  2:1292420/1‑118 (MQ=255)
                                              aataaaacaaTTTTTTTTTTAGATATTTTTTGTATATTCAAATTTTTAAAAAATTA‑ATTTTAAATTTTAAAAAATA‑TATTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTttgtt                                                                                     <  2:482566/126‑1 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTAGTTATttttttt                                                                                    >  1:124526/1‑127 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAAAT‑ATAAATTTTATTTATttttttta                                                                                   >  1:1895600/1‑126 (MQ=255)
                                                ttaaaataATATTTTTTTTTATTTTTTTTTTATATTCAAATTTTTAAAAAATTA‑ATTTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTtgttgt                                                                                   <  2:1555300/126‑1 (MQ=255)
                                                taatactaTTATTTTTTTTTTTATTTTTTTTATATGCAAATTTTAAAAAAATTA‑ATTTTAAATTGTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTtgttgt                                                                                   <  1:780936/128‑1 (MQ=255)
                                                taaaaataATATATTTTTAGTTTTTTTTTTTATATTTAAATTTTTAAAAAATTA‑ATTTTAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCt                                                                                 <  2:1480066/128‑1 (MQ=255)
                                                  aaaataTTTTCTTTTTATAAATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTTAACTTTTAAAAAAT‑‑TTGTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑a                                                                               <  2:409920/128‑1 (MQ=255)
                                                    actaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAAA‑ATAAATTTTATTTATttttttttaaa                                                                                >  1:909883/1‑123 (MQ=255)
                                                    aaaattaattttttATATAATTTTTTTATATTTAAATTTTTAAAAAATAT‑ATTTTTTATTTTAAAAAATA‑TATTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑aa                                                                              <  2:1692889/119‑1 (MQ=255)
                                                     ctaTTATTTTTTTATTTATTTTTTTTTTATTCAAATTTTTAAAAAATTA‑ATTTTAAATTTTAAAAAAAATCTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑aa                                                                              <  2:522073/128‑1 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTAGTTTTTTTTTTTTAT‑aat                                                                             >  1:495497/1‑127 (MQ=255)
                                                        ttttatttttttatattttttttatatTAAAATTTTTAAAAAATTA‑ATTTTAAATTTTTAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAt                                                                          <  2:1905963/123‑1 (MQ=255)
                                                        ttttatttttATAATTTTTTTTTATATTCAAATTTTTAAAAAATTA‑AATATAAATTTTAAAATATA‑‑TCTTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGGTATTTTGTTGTAT‑AAGTATc                                                                         <  2:1964475/123‑1 (MQ=255)
                                                         tatTTTTTTTTATATTTTTTTTATATTTAAATTTTTAAAAAATTA‑ATTTTAAATTTTAAAAAATA‑TATTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATc                                                                         <  2:124526/128‑1 (MQ=255)
                                                         tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTATTTTTT‑TATTGGAAAT‑ATAAATTTTAGGTTTTTTTATGTAT‑AATTaat                                                                         >  1:1528934/1‑126 (MQ=255)
                                                             tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TATTGTAAAT‑ATAATTTTTTTTTATTTTTTTGTTT‑aattttaaaaa                                                                     >  1:468033/1‑119 (MQ=255)
                                                               tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTATTTATTTTTTTTACT‑AATTATATaaaaa‑a                                                                 >  1:1158483/1‑128 (MQ=255)
                                                                   tatatTTTTTTTATTTTTAAATTTTTAAAAAATTA‑ATTTGAAATTTTAAAAAAT‑‑TTATTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAg                                                             <  2:648301/127‑1 (MQ=255)
                                                                    ttatTTTTTTTTTATGTAAATTTTTAAAAATTTT‑ATTTTTAATTGTAAAAAA‑ATTGTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAg                                                             <  1:1561626/127‑1 (MQ=255)
                                                                    ttatTTTTTTTATATTAAAATTTTTAAAATATTA‑ATTTTTTATTTTAAAAAAT‑TTATTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAg                                                             <  1:950304/127‑1 (MQ=255)
                                                                     ttttttttttttATTTAAATTTTTAAAAAATTT‑ATTTTAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGaaa                                                          <  1:575567/126‑1 (MQ=255)
                                                                      atTTTTTGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTATTTTTTTTTTTTTAT‑AATTATAaaaaaa‑aaaaaaa                                                           >  1:1605013/1‑123 (MQ=255)
                                                                       ttttttttATTTTTAAATTTTTAAAAAATTA‑ATTTGAATTTTTAAAAATTTTC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGaaa                                                          <  2:1646756/128‑1 (MQ=255)
                                                                       ttttttGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAA‑AAAAATTTTATTTAATTTTTTTTAA‑AATTAAATAaaaa‑aaaaaaaa                                                          >  2:271018/1‑128 (MQ=255)
                                                                         ttttGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTAGGTATTTTGTTTTAT‑AATTATATAAAAA‑AATAAAAA‑gaa                                                      >  1:648301/1‑126 (MQ=255)
                                                                         ttttGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGATTTTTTTTTTTTTTTTTT‑‑TAATGGAAAT‑ATAAATTTTAAGTATTTTTTTGAAT‑AATTATATAAAAATAATA‑AAA‑GGa                                                      >  1:1070009/1‑128 (MQ=255)
                                                                           ttGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAAAAA‑ATAAATTTAAGTATTTTTGTTTTCT‑AATTAAATaaaaa‑aaaataatttaa                                                      >  2:431364/1‑118 (MQ=255)
                                                                           ttGTATATGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AATTATCTAAAAA‑AATATAAA‑GTaaaaa                                                  >  1:1924846/1‑128 (MQ=255)
                                                                                tatGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATTGAAAT‑AAAAATTTTAGGTATTTTTTTTTAT‑AATTAAATAAAAA‑AATAGAAA‑TGAAAAAat                                                >  2:233546/1‑128 (MQ=255)
                                                                                tatGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATGTAAAT‑ATAATTTTTAGTTTTTTTTTTTTTT‑AATTTTGTAAAAT‑AATATAAA‑Gaaaaaatt                                                >  2:341128/1‑126 (MQ=255)
                                                                                 attaaaaTTTTTAAAAAATTA‑ATTTTAAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAatat                                              <  2:1722134/124‑1 (MQ=255)
                                                                                  tGCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATTATTTAAAT‑ATAAATTTTTTTTATTTTTTTTTAT‑AATTATAAAAAAA‑AAAATAAA‑GAAAAAAaaata                                             >  1:849262/1‑127 (MQ=255)
                                                                                   gCAAATTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAATTTTTAGTTTTTTTTTTTTAT‑ATTTATATAAAAA‑AATATAAA‑TGAAAAAATATTg                                            >  2:608396/1‑128 (MQ=255)
                                                                                     aaaTTTTTTAAAAATTATATTTTAA‑TTTTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGt                                           <  1:425059/128‑1 (MQ=255)
                                                                                     aaaTTTTTAAAAAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TATTTTATAT‑ATAAATTTTTGTTATTTTTTTGAGA‑TAGTATCTAAAAA‑ATTAGAAA‑GGAAAAATTTTTGt                                           >  1:1707676/1‑128 (MQ=255)
                                                                                      atttttAAAAAAATTA‑TTTTTAA‑TTTTAAAAAA‑ATTTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTa                                         <  2:1527082/126‑1 (MQ=255)
                                                                                           tttaaaaatta‑tttTTAATTTTT‑AAAAATATTTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTATGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAg                                     <  2:1783242/122‑1 (MQ=255)
                                                                                           atttttaattt‑attTTTAATTTTAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGt                                    <  1:44050/122‑1 (MQ=255)
                                                                                               aaaatta‑attTTAAATTTTAAAAAA‑‑‑‑TTTCTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACt                              <  1:1367294/126‑1 (MQ=255)
                                                                                                aaatta‑attTTAAATTGTTAAATATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATAc                               <  1:538475/127‑1 (MQ=255)
                                                                                                aaatta‑attTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTTTTTTTTTGTAT‑AAGTATATAAAAA‑AATAGAAA‑TGAAAAAATATTTTTAAAATTAATa                                >  1:281339/2‑128 (MQ=255)
                                                                                                 aatta‑attTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGTTATTTTGTTTTAT‑AATTATCTAAAAA‑AATAGAAA‑TGAAAAAATATTTTTAAATTTAATaa                               >  2:1191255/1‑127 (MQ=255)
                                                                                                 aatta‑attTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAATT‑ATAAATTTTAGTTATTTTTTTTTAT‑AATTAAATAAAAA‑AATATAAA‑TTAAAAAATATTTTTAAAATTaaaaa                               >  2:70642/1‑125 (MQ=255)
                                                                                                 aatta‑attTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGGTATTTTGTTGACT‑AATTATCAAAAAA‑AATAAAAA‑GTAAAAAATATTTTTATAATTAATACt                              >  1:1492295/1‑128 (MQ=255)
                                                                                                 aatta‑attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATATTGTAAAT‑TTAAATTTTAGGTATTTTTTTTTAT‑ATATAAATAAAAA‑AAAAAAAA‑GTAAAAAA‑ATTTTTAAAATTaaaaaata                            >  1:1299401/1‑122 (MQ=255)
                                                                                                  atta‑attTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGTAAAT‑TAAAATTTTAGGTTTTTTTTTGTAT‑ATTTAAGTAAAAA‑ATTTAAAA‑GAAAAAAATATTTTTAAAATTAATag                               >  2:1824257/1‑127 (MQ=255)
                                                                                                  atta‑attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTTTGTTTTTTTTTTTAT‑AA‑TTTAAAAAAA‑AATATAAATGTAAAAAATATT‑TTAAAAGTTAttaaaaa                           >  1:1778099/1‑122 (MQ=255)
                                                                                                   tta‑attTGAACTTGTAAAAAATAGCTATTTTTTTTTTTTTTTATTAAATGTAAAT‑ATAATTTTTATTATTTTTTTTTTAA‑AATTATAAAAAAA‑AATAAAAT‑GTATAAAAATTTTTTAAACTTAATACt                              >  2:1049757/1‑128 (MQ=255)
                                                                                                   tta‑attTGAACTTGTAAAAAATAG‑‑‑‑ATTTTTTTTTTTTTTTAAAATGGAAAT‑ATAAATTTTAGTTAATTTTTTGTCT‑AATTATATAAAAA‑AATATAAA‑TTAAAAAATATTTTTAAAAGTAATAATaaaa                          >  2:1456793/1‑128 (MQ=255)
                                                                                                    ta‑attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAAAATGGTAATAAAAAATTTTAGG‑ATTTTTTTTTATAAATTTTAAAAAAA‑AATAAAAA‑GAAAAAAAATTTATTaaaataaaaaaaaaa                           >  1:103292/1‑117 (MQ=255)
                                                                                                    ta‑attTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGTTATTTTTTTGAAT‑AAGTATAAAAAAA‑AATAGAAA‑GGAAAAAATATTTTTAAAAGTAATAGTAAAat                         >  2:1007244/1‑128 (MQ=255)
                                                                                                     a‑attTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTTGGTATTTTTTTTAAT‑AATTTAATAAAAA‑AATTAAAA‑GAAAAAAATATTTTTAAATTTAATAATaaaa                          >  1:38168/1‑128 (MQ=255)
                                                                                                          tGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATTATTGAAAT‑ATAAATTTTAGGTTTTTTGTTTTAT‑AAGTATATAAAAA‑AATAGAAA‑TGAAAAAATATTTTTAAAATTTATAATAAAttta                       >  2:1401596/1‑128 (MQ=255)
                                                                                                          tGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAATA‑ATAAATTTTAGTTATTTTGTTGTAT‑AATTAAATAAAAA‑AATAAAAA‑GTAAAAAATTTTTTTAAAATTAATAATTAAaata                       >  2:905103/1‑128 (MQ=255)
                                                                                                            aaCTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGTAAAT‑TTAATTTTTTGTTTTTTTTTTTTAA‑AATTAAATAAAAA‑AATATAAA‑GAAAAAAATATTTTAAAAATTATAACTAAAAtttttt                    >  1:1815466/1‑128 (MQ=255)
                                                                                                              cTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑TTAATTTTTAGGTATTTTGTTTTGT‑AAGTTTCTAAAAA‑AATATAAA‑TCAAAAAATATTGTTAAATTTAAAAAATAAATTATTTat                  >  2:1081383/1‑127 (MQ=255)
                                                                                                               ttGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATATTGGAATT‑ATAATTTTTTGGTATTTTGTTTTAT‑AAGTTTATAAAAA‑AATATAAA‑GTAAAAAATATTTTTAAAAGTTATAATAAAATTATTTaa                  >  2:798954/1‑128 (MQ=255)
                                                                                                                 tttttatatttttttttttttttttttttttATAATGTAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAAt                 <  1:98716/116‑1 (MQ=255)
                                                                                                                 tttttaaaTATTTTTTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTATGTATTTTGTTGTAT‑AAGTATATAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAAt                 <  1:1414373/123‑1 (MQ=255)
                                                                                                                  tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTATTTTGTTGTAT‑AAGTATATAAAAA‑AATAGAAA‑GAAAAAAATATTTTTAAATGAAATAATAAAATTATTTAATGtt              >  2:866910/1‑128 (MQ=255)
                                                                                                                    ttaataatattattttttttttttttttATTATTTAAAT‑ATAAATTTTAGTTATTTTTTTTTCT‑AATTATCTAAAAA‑AATAGAAA‑GTAAAAAATATTGTTATAAGTAATACTAAAATTATTTAAtttt              <  2:975439/116‑1 (MQ=255)
                                                                                                                      aaaTAGCTTTTTTTTTTTTTTTTTTT‑TAATGTAAAT‑ATAAATTTTAGTTATTTTTTTGTAT‑AATTATCTAAAAA‑AATATAAA‑GTAAAAAATATTTTTAAAAGTAATAATAAAATTATTTAATTataat           >  2:1745240/1‑128 (MQ=255)
                                                                                                                       aaatattttttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaat           <  2:1884552/122‑1 (MQ=255)
                                                                                                                          tagcttttttttttttttttttATAATGGAAAT‑TTAAATTTTAGGTTTTTTGTTGTCT‑AATTATATAAAAA‑AATAGAAA‑TGAAAAAATATTTTTAAAAGTAATAATAAAATTATTTTATTttatttaa        >  2:1348547/5‑128 (MQ=255)
                                                                                                                           tttttttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTaaa       <  1:341128/126‑1 (MQ=255)
                                                                                                                                |                                                                                                                                   
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTA‑ATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTATCTAAAAA‑AATAGAAA‑GGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.