New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 349451731 (0.630)693 (0.230)
+AAA
126/214 29.6 26.7% intergenic (+49/+117) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
?CP016816 34946 = 1927 (0.610)intergenic (+50/+116) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 871 total aligned reads displayed.

TTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/34819‑34945
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTT  >  CP016816/34946‑35072
                                                                                                                               |||                                                                                                                                
  TACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAAGGCTAAGTGAAGTTGATGAATAATAAAAGAATAACCCAACTACATTGTGTTTGCTTTTTTTATTTACTATTGAAA                                                                                                                                  >  1:5843467/1‑128
  TACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACAAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAATATTAAACCAAATACATTGTGTTTTATTTTTATATTTACTATTGAAA                                                                                                                                  >  1:4201340/1‑128
   ACTTTTTTTTGAGTTTCAACAAAAACTTTATTAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAATATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAATATTTAAAA                                                                                                                                 <  2:4630124/128‑1
   ACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGATAAGTGAAGTTCATGAATAATAAAAGATTAAACCAAATACATTGTCTTAGTTTTTTTTATATACTATAGAAAA                                                                                                                                 >  1:686049/1‑128
    ctaCTTTATGAGTTTAAACAAAATTAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTCATTAATAATAAAATATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAA                                                                                                                                <  1:479609/125‑1
      TCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAA                                                                                                                              >  1:3884777/1‑128
      TCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATAGTGTTTGGTTTTTTTATTTACTATTGAAAAAAA                                                                                                                              >  1:5697396/1‑128
      TCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATACTAAGTTAAGTTGATGAATAATAAAAGATTAAAAAAAATACATTTTTTTTTGTATATTTAATTACTATTGAAAAAAA                                                                                                                              >  1:2711257/1‑128
      TCTTTATGAGTTTCAACAAAAAGAGTAAGAAAAGCTGAACCAAGTACAATGATAAGTGAAGTTGATTAATAATAAAAGATTAAACCAAATACAATTTGTTTGGTAATTATATATACTATTAAAAAAAA                                                                                                                              >  1:2871711/1‑128
       CTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAA                                                                                                                             >  1:5352676/1‑128
        TTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGTTTTTTTATTTACTATTCAAAAAAAAA                                                                                                                            >  1:4970393/1‑128
        TTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTTAAAAAAAAA                                                                                                                            >  1:6305072/1‑128
        TTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGAGTTTGGTTTTTTTATTTACTATTTAAAAAAAAA                                                                                                                            >  2:72103/1‑128
           ATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGATAAAAAAAAAA                                                                                                                         >  1:1815589/1‑128
           ATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAATAAAAAAAAA                                                                                                                         >  2:6434911/1‑128
           ATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGATTTTGTTTTTTTTATTTACTATTGAAAAAAAAAAAA                                                                                                                         >  1:2324862/1‑128
             GAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAATTGAAGTTGACGAATAATAAAAGATTAAACCAAATACATTTTTTTTAATTTTTTTATTTACTATTAAAAAAAAAAAAAAA                                                                                                                       >  2:42836/1‑128
              AGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAA                                                                                                                      >  1:5750227/1‑128
              AGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGATGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAA                                                                                                                      >  1:440314/1‑128
                TTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAATTTGATGAATAATAAAAGATTAAACCAAATACATTGTTTTAGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA                                                                                                                   >  2:2898423/1‑128
                 TTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAta                                                                                                                   >  2:6666577/1‑126
                   CAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATTCTAAGTTAAGTAGATGAATAATAAAAGATTAAACCAAATACATAGTGATTATTATTTTTATTTAATATTTAAAAAAAAAAAAAAAAtaat                                                                                                                 >  1:1255370/1‑124
                   CAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTCTATTTACTATTGAAAAAAAAAAAAAAAAAAaa                                                                                                                >  2:5925689/1‑126
                     ACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACAAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAatat                                                                                                              >  1:3316421/1‑124
                      CAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACAAAATAAATTATTTTTTGTATTTTTATTTACTATTTAAAAAAAAAAAAAAAAAAAAATA                                                                                                             >  2:184973/1‑128
                         AAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAAACAAATACATTGTGTTTTGTTTTTTTATTTAATATATAAAAAAAAAAAAAAAAAAAAAaaaaa                                                                                                          >  2:4052976/1‑123
                          AAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTTTTTGGTTTTTTTATTTACTATAGAAAAAAAAAAAAAAAATAATAAaaatt                                                                                                          >  1:4348984/1‑123
                          AAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTATTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAataaaattt                                                                                                         >  1:2641369/1‑119
                           AGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTTTTTGGTTATTTTATTTACTATTTAAAAAAAAAAAAAAAATAAAATAaatta                                                                                                        >  1:4000691/1‑123
                           AGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAataaaatttt                                                                                                        >  2:132912/1‑118
                              GTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAAAaaatttaaaa                                                                                                     >  1:1389778/1‑118
                              GTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAAAATAATAAaaataaaat                                                                                                      >  1:1138940/1‑119
                               TAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAATAAAATtaacataa                                                                                                    >  2:1037269/1‑120
                                 AGAAATGCTGAACCAAGTACAAAGCTAAGTGAAGATGATGAATAATAAAAGATTAAACCAAATACATTGTGTTAGGATTTTTAATATACTATTGAAAAAAAAAAAAAAAATAATAAaaaaaaaaatct                                                                                                   >  2:1449592/1‑116
                                     ATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATA                                                                                             >  1:859292/1‑128
                                      TGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAATATAATTTAAATAATATAA                                                                                            >  2:5184687/1‑128
                                      TGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTGATTAATATAA                                                                                            >  2:3897875/1‑128
                                        CTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAATAATATAAA                                                                                           >  1:307147/1‑128
                                        CTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGATTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAAAATAATTTGCTTAATTAAAAA                                                                                         >  1:6777738/1‑128
                                            ACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTATTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAAATATATTTAATAATATAAAAAATat                                                                                     >  2:2289090/1‑126
                                             CCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAATATTATAATTTGCATACTAAAAAAAATT                                                                                      >  1:6088376/1‑128
                                               AAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATATAATTTGAATAATATAAAAAATTTTTT                                                                                  >  2:6195975/1‑128
                                                 GTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTAAAAAAAAAAAAAAAAATAATAAAATATACATACTAAAAAAAATTTTTTTa                                                                                >  2:6034162/1‑127
                                                  TACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAACCCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATAAAATTTGAATACTATAAAAAATTTTTTTaa                                                                               >  2:2438560/1‑126
                                                      ATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAATATAATTTGAATAATAAAAAAAATTTTTTTTAAAA                                                                            >  1:5578553/1‑128
                                                      ATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTTTTTTaaaaa                                                                            >  1:5426732/1‑123
                                                       TGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAAAATAATTTTAAAAAAAAAAAAAATTTTTATTAAAAa                                                                           >  1:4716395/1‑127
                                                       TGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTGAATAATATAAAAAATTTTTTTAAAAAT                                                                           >  2:6543998/1‑128
                                                       TGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATAAAATTTAAATAGAATAAAAAATTTTTataaagaa                                                                           >  1:1521079/1‑120
                                                       TGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAAAATAATTTGAATACTAAAAAAAATTTTTTTTCAAAT                                                                           >  1:2544803/1‑128
                                                         CTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTAATTACTATTGAAAAAAAAAAAAAAAAAAAAATAAAATTTTAATAATAAAAAAAATTatattaaaaaaa                                                                          >  2:3010003/1‑116
                                                           AAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTTCATAATATAAAAAATATTTATTCAATTAAGT                                                                       >  2:4464139/1‑128
                                                            AGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAATAATATATTTTGCAAAATATAAAAAATTTTTTTTAAAAAAAtt                                                                       >  1:3574815/1‑126
                                                                AAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATATAATTTTCATAATATAAAAAATTTTTTTAAAAATAATTATTaat                                                                 >  1:2954328/1‑125
                                                                    ttattAATAATAAAATATTAAAAAAAATAAATTGTTTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAG                                                              <  1:2439977/123‑1
                                                                       TGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATATTATAATTTGCATACTATAAAAAATTGTTTTTCAAATCAGTATGAAGGAGTAA                                                           >  1:6169502/1‑128
                                                                           taaataaattTTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTT                                                       <  2:255502/118‑1
                                                                            AATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATATAATTTGAATAATAAAAAAAATTTTTTTAATAATAAGTATTCAGGATTAATTTTAt                                                     >  2:2147154/1‑127
                                                                             aatAAATATTAAACCAAATAAATTGTTTTTGGTTTTTTTTTTTAATATTTAAAAAAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTA                                                      <  2:1159411/125‑1
                                                                                AAATATTAAACCAATTACTTTTTTTTTGTTTTTTTTATTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAA                                                  <  1:6031469/128‑1
                                                                                AAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAAAATAATTTGCATAATATAAAAAATTTTTTTTCAATTAAGTATTCAGGATTAAATTTAAAAA                                                  >  1:5506422/1‑128
                                                                                 AAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAAAAAAATAATTTGAATAATTTAAAAAATTGTTTTTCAAATAATTATTCGGGTTAAAATTTAAAAAc                                                 >  2:5547514/1‑127
                                                                                 AAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATATAATTTGAATAAAATAAAAATTTTTTTTTAAAATAATTATTAAGGAGAAAATTAAAAAAAC                                                >  2:5831835/1‑128
                                                                                  atATTTAAACAAATAAATTTTTTTTGTTTTTTTTTTTTAAATTTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAAC                                                <  1:5184687/126‑1
                                                                                     TTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATATAATTTGAATAATATAAAAAATTTTTTTTCAAATAATTATTAAGTATTAAATTTAAAAAAaaaat                                            >  1:4529788/1‑123
                                                                                      aAAACAAAATAAATTGTGTTTGGTTTTTTTATTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAG                                            <  1:6549532/127‑1
                                                                                      TAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTAAAATAATTATTCAGGATAAAATTTAAAAAACCAAG                                            >  1:3804450/1‑128
                                                                                             aatcaatttttTTTTGTTTTTTTATTTACTTTTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATA                                     <  2:3754015/117‑1
                                                                                             aaaaatattgtTTTTGTTTTTTTATTTTATAATTTAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATA                                     <  2:824393/117‑1
                                                                                             aaaaaatttgtTTTGGTTTTTTTTTTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATA                                     <  2:1671018/117‑1
                                                                                             AATACATTGTGTTTGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAA‑‑AATATATTTTGAATAATATAAAAAATTGTTTTTAAAATAAGTATAAAGGAGTAAATTTAAAAAACAAAGAGTTATAA                                    >  1:592217/1‑128
                                                                                              aaACATTGTTTTTTGTTTTTTTATTATAAATTTAAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATA                                     <  1:1013109/126‑1
                                                                                              ATAAATTTTTTTTGGTTTTTTTTTTTAAAATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATAA                                    <  1:671841/128‑1
                                                                                                     GTGTTTTGTTTTTTTATTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGG                             <  2:3250056/128‑1
                                                                                                      ttTTTTGTTTTTTTATTTACTATTTAAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGG                             <  2:629474/126‑1
                                                                                                      ttTTTGGTTTTTTTAATTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGT                            <  1:3218515/126‑1
                                                                                                        TTTGTTTTTTTTATTTACTATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTT                          <  1:3694264/128‑1
                                                                                                          TGGTTTTTTTATTTACTATTGAAAAAAAAAAAAAAAAATAATATAATTTGCATAATTTAAAAAATTGTTTTTCAAATAAGTATTCAGTAGTAAATTTAAAAAACCAATATTTATAAATCTTGGTTTTT                        >  1:4113127/1‑128
                                                                                                           GGTTTTTTTATTTAATATTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTG                      <  1:4623349/128‑1
                                                                                                              TTTTTTTTTTAATATTTAAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGT                     <  2:1941855/128‑1
                                                                                                              TTTTTTATTTAATATTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTT                   <  2:3618727/128‑1
                                                                                                                TTTTTTTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTA                  <  1:1975224/128‑1
                                                                                                                 TTTATTTAATATTTAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAT                 <  2:679213/128‑1
                                                                                                                     attttaatatttAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATT              <  1:748892/116‑1
                                                                                                                      ttttattatttAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTA             <  2:1541892/117‑1
                                                                                                                      TTAATATTTAAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTA             <  2:5701464/128‑1
                                                                                                                        tttatatttAAAAAAAAAAAAAAAATAATATAATTTGAATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATT           <  2:5337558/119‑1
                                                                                                                         taataattAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTA          <  2:4960838/120‑1
                                                                                                                          tttttAAACAAAAAAAAAAAAAATAATATAATTTGCATACTCTAAAAAATTTTTGTTAAAATAAGTAGGCAGGAGTAAATTTAAAACACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTAT         <  2:3451577/123‑1
                                                                                                                          ttatttAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTAT         <  1:3437979/122‑1
                                                                                                                          cttttgAAAAAAAAAAAAAAAAATAATATAATTTGCAGACTATAAAATATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTAT         <  1:6491947/122‑1
                                                                                                                            tatttAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTT       <  1:6430996/123‑1
                                                                                                                            tatttAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTT       <  1:1687093/123‑1
                                                                                                                            atttAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTT       <  2:2701395/124‑1
                                                                                                                            atttAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTT       <  1:2132094/124‑1
                                                                                                                             tttAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTG      <  2:5426732/125‑1
                                                                                                                             attAAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTG      <  1:5102459/125‑1
                                                                                                                                gAAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTAAAAATAATTATTCAGTATAAAATTTAAAAAACCAAAAGTTATAAAAATTGGTTTTTTGTTTATATTATTATTTttat   >  2:4724936/2‑124
                                                                                                                                 AAAAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTGTTTTTAAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTT  <  2:2048054/128‑1
                                                                                                                                 AAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTT  <  2:3116591/128‑1
                                                                                                                               |||                                                                                                                                
TTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/34819‑34945
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTT  >  CP016816/34946‑35072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.