New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202486212 (0.070)434 (0.140) 92/250 49.6 64.4% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 267 (0.090)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 434 total aligned reads displayed.

GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  >  CP016816/202490‑202615
                                                                                                                                                                                                                                                                      
 TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAACAACAATCCCCTTAA                                                                                                                                  >  2:5817240/1‑128
 TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCATCACAAAAAAAAAAAAAACAAACCCCTTAA                                                                                                                                  >  2:6096791/1‑128
   AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAATCAACTTAAAA                                                                                                                                >  1:5972390/1‑128
   AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAA                                                                                                                                >  2:761137/1‑128
   AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATACACTTAAAA                                                                                                                                >  1:5630337/1‑128
    GTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAAACCCTTAAAAA                                                                                                                               >  2:5602424/1‑128
    GTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAAATCTTATAATTTATATCCTCGTGATCTATTTTATTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCAACTTAAAAA                                                                                                                               >  2:1728174/1‑128
    GTGTAAATAATAAAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATATTCACAAATAAAAAAAAAACAATCCCAATAAAAA                                                                                                                               >  2:5730167/1‑128
        AAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAAT‑‑TAA                                                                                                                        >  1:5580722/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCATTAAAAAT‑‑TAAA                                                                                                                       >  2:6146546/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAAT‑‑TAAA                                                                                                                       >  1:5765348/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATATTCACAAATAAAAAAAAAAAAATCCCCTTAAAAAT‑‑AAAA                                                                                                                       >  2:3615035/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGCGCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAATTAAAAAATAAACAATCCCTTAAAAAAT‑‑TAAta                                                                                                                      >  2:5900646/1‑126
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTAGTGATCTATTTTATTATATGTTTATCTTCACAAATAAAAAAAAAAAAATCACATAAAAAAT‑‑TAAAA                                                                                                                      >  1:2141667/1‑128
           TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTATTATTTGTTTATCTTCACAAATAAAAAAAAACAAACACCTTAAAAAT‑‑TAAAAAA                                                                                                                    >  1:1229792/1‑128
           TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTATTTTTTTATATTTTTATATTCACAAATAAAAAAAAAAAAATCACATTAAAAAT‑‑AAAAAA                                                                                                                     >  1:362022/1‑128
           TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGAACCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAAT‑‑AAAAAA                                                                                                                     >  2:5294958/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATTTAGATCCACGTGATCTATTTTTTTATTTATTTATCTTCACAAATAAAAAAAAAAAAATCAACAAAAAAAA‑‑AAAAAAA                                                                                                                    >  2:3519740/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAATAAAAAAAAAAAAATAAAATTAAAAAT‑‑TAAAAAA                                                                                                                    >  2:6806424/1‑128
             ATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAAACCACTTAAAAAT‑‑TAAAAAAA                                                                                                                   >  2:676656/1‑128
               AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCAATAAAAAT‑‑AAAAAAAAAA                                                                                                                >  2:6470038/1‑128
                 AGTTAAGGTTAATTAAAATACCATAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCATAAAAAT‑‑TAAAAAAAAAAAA                                                                                                             >  1:6020508/1‑128
                 AGTTAAGGTTAATTAAAATACAATAAACTTAATAATTCTTATAATGTAGATCATCTTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAATCCACTTAAAAAT‑‑TAAAAAAAAAAAA                                                                                                             >  1:5018339/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTAATTTTTTATTTGATTATCTTCACAAAAAAAAAAAAAACAAAACCCATAAAAAA‑‑AAAAAAAAAAAAAA                                                                                                            >  2:1463618/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAACAATACACTTAAAAAT‑‑TAAAAAAAAAAAAA                                                                                                            >  2:458524/1‑128
                    TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAACAAAACAAATAAAAAA‑‑AAAAAAAAAAAAAAA                                                                                                           >  2:2186443/1‑128
                    TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAA                                                                                                           >  2:5630837/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCATAAAAAT‑‑TAAAAAAAAAAAAAAA                                                                                                          >  1:3526138/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTAGTTTATCTTCACAAATAAAAAAAAAAAAAACCCCTAAAAAAA‑‑AAAAAAAAAAAAAAAA                                                                                                          >  2:3397723/1‑128
                      AGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATATTCAAAAATAAAAAAAAAACAATAAAAATAAAAAA‑‑TAAAAAAAAAAAAAAAA                                                                                                         >  2:2394190/1‑128
                      AGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACACCTAAAAAAT‑‑TAAAAAAAAAAAAAAAA                                                                                                         >  2:3921465/1‑128
                      AGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATAACCTTAAAAAT‑‑TAAAAAAAAAAAAAAAA                                                                                                         >  1:5350627/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTATATTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCACCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  2:5389052/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATACACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  1:6532827/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTAATTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATAACATTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  1:5206451/1‑128
                        GTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAAAACCTAAAAAAT‑‑TAAAAAAAAAAAAAAAAAA                                                                                                       >  1:5672162/1‑128
                         TTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATATGTTTATCTTCACAAATAAAAAAAAAACAATCACATTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAA                                                                                                      >  1:5862033/1‑128
                          TAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAA                                                                                                     >  2:1614854/1‑128
                           gATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                    >  2:652108/2‑127
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                    >  2:829668/1‑127
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAaaaa                                                                                                 >  2:6673186/1‑124
                              TAAAATACCATAAACTTAATAATTCTTATAATTTAGATCCTCGTTATATATTTTTTTATTTGAATATCTTCACAAATAAAAAAAAAAAAATACACTAAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAaaaa                                                                                                 >  2:3201045/1‑124
                                 AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAATCACATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                              >  1:1753258/1‑128
                                 AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCATTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACAAAAAA                                                                                              >  2:6002586/1‑128
                                   TACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAtaaaaaaaaa                                                                                            >  1:5545368/1‑118
                                   TACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAAACA                                                                                            >  2:5683152/1‑128
                                       ATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAaa                                                                                        >  2:1879856/1‑126
                                       ATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAAAAATTAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAA                                                                                          >  1:1362468/1‑128
                                          AACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTAATTTGTTTATCTTCACAAATAAAAAAAAAACATTCACCTTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAAACAAATACAAAaaac                                                                                      >  2:4469993/1‑124
                                                                 ttTCCTCGTTATCTATTTTTTTATTTTTTTATCTTCAAAAAAAAAAAAAAAAAAAACCCCAAAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATA                                                               <  2:4765236/126‑1
                                                                    aatatttttaTATTTTTTTTTTTTTTTATTTTAAAAAATAAAAAAAAAAAAATACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCA                                                            <  1:4850936/118‑1
                                                                        tttttaTATTTTTTTATTTTTTTATATTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATT                                                        <  1:919291/122‑1
                                                                        gttATCTATTTTTTTATTTGTTTATCTTAAAAAATAAAAAAAAACAAACCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                       <  1:2343832/125‑1
                                                                         ttataTATTTTTTTATTTTTTAATATTAAAAAATAAAAAAAAAAAAATCACCTTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                       <  1:311333/123‑1
                                                                         ttataTATTTTTTTATTTTATTATATTAAAAAAAAAAAAAAAAACAATCCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                       <  1:4170162/123‑1
                                                                                TTTTTTTATTTTTTTATTTAAAAAAAAAAAAAAAAAAAATCCCCATAAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  2:5245815/128‑1
                                                                                TTTTTTTAATTTTTTAAATAAAAAAAAAAAAAAAAAACAATCCCCTTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  1:3397723/128‑1
                                                                                 TTTTTTATTTTTTTAAAATAACAAATAAAAAAAAAAAAATACACTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  1:1053686/128‑1
                                                                                   ttaTATTTTTTTATATTAAAAAATAAAAAAAAAAAAAATCACATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAA                                             <  1:6352146/125‑1
                                                                                    TTTATTTTTTTATAATAAAAAAAAAAAAAAAAAAAAACCCATTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAA                                            <  1:3817427/128‑1
                                                                                      ttTTTTTTTATATTAAAAAAAAAAAAAAAAAAAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                         <  2:246375/126‑1
                                                                                      TATTTTTTTATATTCAAAAATAAAAAAAAAAAAATCCCCTTAAAAAT‑‑‑‑AAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                       <  1:6863129/128‑1
                                                                                      TATTTTTTTATATTAAAAAAAAAAAAAAAAAACAATACACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATA                                          <  1:6704898/128‑1
                                                                                      TATTTTTTTATAATAAAAAATAAAAAAAAAAAAAAAACCATAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                         <  1:980900/128‑1
                                                                                      TATTTTTTAATATTCACAAAAAAAAAAAAAAAATACACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                         <  1:1780943/128‑1
                                                                                         tttTTTTTCTTTAAAAATAAAAAAAAAAAAAATACCCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                         <  1:6238522/125‑1
                                                                                         tttTTTATCATAAAAAATAAAAAAAAAAAAATCCCTTTTAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTTAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  2:798671/125‑1
                                                                                            ttttataataaaAAAAAAAAAAAAAAAAAAACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  1:1965319/116‑1
                                                                                            tattattaatcaAAAAAAAAAAAAAAAAAACCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCATAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  1:5900952/116‑1
                                                                                             ttaaaTTCACAAAAAAAAAAAAAAAAATACCCTTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  1:4496214/123‑1
                                                                                             atatattaaaaAAAAAAAAAAAAAAAAAACCCATTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATAT                                    <  1:1680075/117‑1
                                                                                               ttaTTCAAAAATAAAAAAAAAAAAAAAAACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTat                                 <  1:4389383/125‑3
                                                                                                tattaACAAAAAAAAAAAAAAAAATACACTTTAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  1:5726635/123‑1
                                                                                                 CTTCACAAAAAAAAAAAAAAAAATCCCAATAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  1:3722188/128‑1
                                                                                                  tattaaAAATAAAAAAATAAAAAAACAATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  2:5206451/122‑1
                                                                                                  atataaAAAAAAAAAAAAAACAATAAACTTAAAAATT‑‑ATAAAAAAAAAAAAAAAAAATCTAAAAACAATCTCTATTTATTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  1:4642317/122‑1
                                                                                                  ataaaaAAAAAAAAAAAAAAAAAAAACCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTACACCACATTTTATTTTTAAAATAAGATATTGACA                               <  2:5771435/122‑1
                                                                                                  TTCAAAAATAAAAAAAAAAAAATAACATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                              <  1:3232493/128‑1
                                                                                                   atataatATAAAAAAAAAAAAATATCCTTTAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                              <  1:4036031/121‑1
                                                                                                    taaaAAAAAAAAAAAAAAAAAACCCTTAAAAAATAAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                              <  2:6020508/124‑1
                                                                                                      aaAAAAAAAAAAAAAAAAAACCACATAAAAAA‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATA                          <  1:662748/126‑1
                                                                                                      CAAATAAAAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                        <  2:6237763/128‑1
                                                                                                       aAAATAAAAAAAAAAAAATCACATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATAT                         <  2:2557572/127‑1
                                                                                                         AATAAAAAAAAAAAAAACACTTAAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                        <  1:3043640/128‑1
                                                                                                             AAAAAAAAAAAAAACCAATAAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATAT                     <  1:807500/128‑1
                                                                                                             AAAAAAAAAAAAAAAACATAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                    <  2:5475576/128‑1
                                                                                                              AAAAAAAAAAAATTACCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                    <  1:2470329/128‑1
                                                                                                              AAAAAAAAAAAATAAACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                    <  1:2690708/128‑1
                                                                                                               AAAAAAAAAAATCACTTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA                  <  1:6123462/128‑1
                                                                                                                  AAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATA               <  1:2234500/128‑1
                                                                                                                  AAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTATTAAAATTACCTATTATACCACATTTAATTTTTAAAAAAAAATAATTAAATAATATATATATAATA               >  1:6154517/1‑128
                                                                                                                  AAAAAAAATACAATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATA               <  2:2883270/128‑1
                                                                                                                  AAAAAAAAACCCCATAAAAAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATA               <  2:2022494/128‑1
                                                                                                                    AAAAAATCACATTAAAAA‑‑ATAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATAT            <  1:6776126/128‑1
                                                                                                                     aaaAATACCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATAT            <  1:2397723/125‑1
                                                                                                                       aaaataccatTTAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATAT            <  1:5304347/118‑1
                                                                                                                       aaaatacactaTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA             <  1:5416347/117‑1
                                                                                                                        aaattcgctTTAAAATT‑‑AAAAAAAATAAAAAATAAAAAACTAAAAAGAAACTGTTTTTCTTAAAATTCCCTATTATAACACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATAT            <  1:2886820/119‑1
                                                                                                                          aatacacaTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT          <  2:6175045/120‑1
                                                                                                                                 TTAAAATT‑‑TAAAAAAAAAAAAAAAAAAAACTAATAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  <  1:6497939/128‑1
                                                                                                                                                                                                                                                                      
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  >  CP016816/202490‑202615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.