New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =2525 (0.810)277 (0.100) 114/224 36.3 11.2% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 2131 (0.760)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2608 total aligned reads displayed.

AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGAT  >  CP016816/76764‑77016
                                                                                                                                   |                                                                                                                               
aaaaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAAT‑ACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑c                                                                                                                                 >  1:4422294/1‑128 (MQ=255)
  aaattaataaaatTTGTGAACTTAAGGATGTATAATAAAAATTAATAATAACTGTAAAACCCAAATTCCCCTTTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTAA‑AA‑‑C‑t                                                                                                                               <  2:866280/117‑1 (MQ=255)
  aaattATAAATATTAGTGAAATTTATGTTTTATAATAAAAATTTATAAAAACTGTTAAACCCAAATTACCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑t                                                                                                                               <  2:2377064/125‑1 (MQ=255)
  aaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑t                                                                                                                               >  2:3253033/1‑128 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑tttttttttt                                                                                                                      >  1:5968325/1‑128 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑tttttttttt                                                                                                                      >  1:4555788/1‑128 (MQ=255)
             atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCATTTAAATTAAAATAACATTATATAAATATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑A‑tttttattattt                                                                                                                    >  2:4572837/1‑128 (MQ=255)
               tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTCTTTAAAGAAAAATATTAC‑AA‑‑C‑tttttttttttttt                                                                                                                  >  1:6346274/1‑128 (MQ=255)
                 gTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑tttttttttttttttt                                                                                                                >  1:573117/1‑128 (MQ=255)
                 gTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑tttttttttttttttt                                                                                                                >  1:805175/1‑128 (MQ=255)
                  tttaataatgtttGTATAATACAAATTAATTAAAAATGTACAAACCAAATTCCCCATTAAATTAAAATAAATTTATATAAATAAAAATTTTTTTAATTAAAATTTTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTg                                                                                                               <  2:3892006/116‑1 (MQ=255)
                  tGAACTTAAGTAATTATAATACAAATTAATAATAAATGTACAAACCAAAATCACCTTTAAATTAAAATAACAATATAAAAATATAAAATTTTTAAATAAAAATATTAC‑AA‑‑C‑tttttttttttttttgg                                                                                                               <  2:776213/128‑3 (MQ=255)
                     aattAATGATTTATAATAAAAATTAATAATAACTTTACAACCCAAATTAACCTTTAAATTAAAAAAACATTTTATAAATTTAAATTTTTTAAATTAAAATATTAA‑AA‑‑C‑ttttttttttttttggaact                                                                                                            <  2:1007696/126‑7 (MQ=255)
                      cTTAATGATGTATAATACAAATTAATAATAACTGAACAACCCAAAATACCCTTTAAATTAAAATAACATTATATAAAGAAAAATTTTTTAAATAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACt                                                                                                          <  1:1968821/128‑1 (MQ=255)
                      atttattttttataATAAAAATTAATAATAAATTTTAAAAACAAATTTCACTTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAA‑AA‑‑A‑TTTTTTTTTTTTTTTTGGAAc                                                                                                           <  2:6277137/118‑1 (MQ=255)
                       ttAAGGAAGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAAGAAAAATAATAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACt                                                                                                          <  1:3463145/128‑1 (MQ=255)
                        tAAGTATTTAAAATAAAAATAAAAAAAAAATGTACAAACAAAATACCCATTTAAATTAAAATAAAATTATAAAAATATAAATTTTTTAAAAAAAAATATTAA‑AA‑‑‑‑‑ATTTTTTTTTTTTTTGGAACTAAc                                                                                                       <  1:1000203/128‑1 (MQ=255)
                          aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑A‑atttttttttttttttaaaataaaa                                                                                                       >  2:4172470/1‑119 (MQ=255)
                           ggATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑CTTTTTTTTTTTTTTTTTGtaactaac                                                                                                       >  1:6090771/1‑128 (MQ=255)
                           ggATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGCAACTAAC‑a                                                                                                     >  2:2107954/1‑128 (MQ=255)
                            gATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑ttttttttttttttttttaaaaaaaat                                                                                                     >  1:3553156/1‑117 (MQ=255)
                             atttataAAACAAATTTATAAAAACTTTAAAAACCAAATTACCCTTTAAATTAAAATAAAAATATATAAATATAAAATTTTTAAATAAAAATATTAC‑AA‑‑‑‑AATTTTTTTTTTTTTTGGAACTAAC‑atat                                                                                                  <  1:5545794/125‑1 (MQ=255)
                             aTGTATAATAAAAATTAAAAATAACTGTAAAACCCAAAATACCCTTTAAAATAAAAAAACATTATATAAAGATAAAATTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACTAAC‑ata                                                                                                   <  1:3253241/128‑1 (MQ=255)
                               ttaaaataCAAATTAAAAAAAACATTAAAAACAAAATTCACCTTTAAATTAAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTAC‑AA‑‑‑‑AATTTTTTTTTTTTTTGGAACTAAC‑ATATaa                                                                                                <  1:1374721/124‑1 (MQ=255)
                                tataATACAAAATAAAAAAAACTGTACAACCCAAATACCACTTTAAATTAAAATAACATTAAAAAAAGATAAATTTTTTAAACAAAAATATTAA‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑t                                                                                              <  2:1805220/128‑1 (MQ=255)
                                 aaaaaaCAAATTAAAAATAACTTTTCAACCAAAATTCCCCTTTAAATTTAAATAAAATTATATAAAAATAAATTTTTTAAATAAAAATATTAA‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑tt                                                                                             <  2:6489051/123‑1 (MQ=255)
                                    aaaCAAATAAATAAAAACAGTAAAACACAAATTACCCTTTAAATTAAAAAAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAA‑AAATT‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑tt                                                                                             <  2:3007672/126‑1 (MQ=255)
                                     taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGAAAAAAAA‑ATATAA‑TTTTAc                                                                                         >  2:5068230/1‑128 (MQ=255)
                                       cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTT‑TAACTAAA‑ATTTAA‑TTTTAcaa                                                                                       >  1:2796212/1‑126 (MQ=255)
                                       cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTT‑TAAATAAA‑ATATAA‑TTTTaaaa                                                                                       >  1:3154682/1‑125 (MQ=255)
                                        aaaTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCaa                                                                                      <  1:36870/128‑1 (MQ=255)
                                         aaTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGTAAATAAC‑‑TATAATTTTTACCAat                                                                                     >  2:2684718/1‑128 (MQ=255)
                                         aaTTAATAAAAACTCTACAACCCAAATTCCCCTTTAAAATCAAATAACATTATATAAACTAAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAat                                                                                     <  1:2106603/128‑1 (MQ=255)
                                            taaaaataaCTGTAAAACCCAAATACCCCTTTAAATTCAAATAACATTATATAAACATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAattat                                                                                  <  1:3829043/128‑1 (MQ=255)
                                              ataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑CTTTTTTTTTTTTTTTTTTTAAATAAA‑ATATAA‑TTTTAAAAattat                                                                                  >  1:117310/1‑128 (MQ=255)
                                              ataataaCTGTACAACCCAAAATACCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAAttatta                                                                                <  1:663515/128‑1 (MQ=255)
                                              ataataaATGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAAttatta                                                                                <  1:5214982/128‑1 (MQ=255)
                                              ataataaATGTAAAAACCAAAATACAATTTAAATTAAAAAAAAATTTAAAAAATATAAATTTTTTAAATAAAAATATTACAAA‑‑T‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAattat                                                                                  <  2:3615300/128‑1 (MQ=255)
                                                 ataaCTGTACAACCCAAATTCCCCTTTAATTTCAAATAACATTTTATAAAGATAAATTTTTTAAATAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGa                                                                              <  2:5171170/128‑1 (MQ=255)
                                                  taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑CTTTTTTTTTTTTTTTTTTGAAATAAA‑ATATAA‑TTTTACCAAatattaaa                                                                              >  1:2989276/1‑126 (MQ=255)
                                                  taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTATaat                                                                            >  1:268125/1‑128 (MQ=255)
                                                      tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTAGAAATAAC‑AAATAA‑TATTACAAAATTTTATaattaca                                                                        >  1:6203480/1‑128 (MQ=255)
                                                      tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATATTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTATTTTTTTTTTT‑TAAATAAA‑ATATAA‑TTTAAAAAattataaaattttaa                                                                        >  2:4434370/1‑118 (MQ=255)
                                                       gTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAAATAAA‑ATATAA‑TTTTACCAATTATTAGaatttca                                                                        >  1:2436944/1‑128 (MQ=255)
                                                        tACAACCCAAATTCCCCTTTAAATTAAAATAACATTATTTAAAGATAAATTTTTTTAAGATAAATATTAA‑AA‑‑C‑TTTTTTTTTTTTTATT‑GATCTAAA‑ATATAA‑TTTTAACAATTTTTAGaatttaaat                                                                      >  2:6147838/1‑128 (MQ=255)
                                                        tACAACCCAAATTCACCTTTAAATTCAAAAAACATTATATAAATCTAAAATTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGaatttcaat                                                                      <  1:3358935/128‑1 (MQ=255)
                                                          cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTTGAAATAAA‑ATATAA‑TTTTACAAATTTATAGaatttaaatt                                                                     >  1:1304671/1‑128 (MQ=255)
                                                          cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGaatttcaattt                                                                    >  1:2202750/1‑128 (MQ=255)
                                                            aCCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTT‑GAAAAAAC‑ATATAA‑TTTTACCAAATATTTAaaattaaattaaa                                                                  >  1:709488/1‑125 (MQ=255)
                                                             cccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTAATATAATTTCAAATTaac                                                                 >  1:2311998/1‑128 (MQ=255)
                                                             cccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAAATAAC‑ATATAA‑TTTTACCAATTATTAGAatttcaatttcaa                                                                 >  2:3133648/1‑127 (MQ=255)
                                                              ccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGG‑ACAAACAATTTAA‑TTTTACAAATTATTAGattttcaatttacaa                                                                >  2:5389332/1‑124 (MQ=255)
                                                               cAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACAACC‑ATATAA‑TTTTACAAATTATTAAAATTTCAATTACAAAg                                                               >  2:1481058/1‑128 (MQ=255)
                                                               aatattcaaaattaaattaaaATATCATTATTTAATTATAAATTTTTTAAATAATAATTATAC‑AA‑‑‑‑ATTTTTTTTTTTTTTAGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAg                                                               <  1:431195/117‑1 (MQ=255)
                                                                 aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑‑‑TTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTATTAGAATTTCAATATCTCAGAtta                                                           >  2:1570474/1‑126 (MQ=255)
                                                                   ttCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTT‑TAAATAAA‑ATATAA‑TTTTAACAATTTTTATAATTTAAATTTCACAGCTGa                                                           >  2:6722026/1‑128 (MQ=255)
                                                                      cccTTTAAATTCAAATAACATTATATAAAGATACATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTATAAATAAA‑ATATAA‑TTATACAAATTAAAAAAAATACAATTTAACAAATTAAt                                                         >  2:6597807/1‑128 (MQ=255)
                                                                      cccTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAAATAAA‑ATATAA‑TTTTACAAATTTTTAAAATTTAAATTTAAAATATAAAtt                                                        >  1:4062917/1‑128 (MQ=255)
                                                                       ccTTTAAATTAAAATAACATTATAAAAATTTAAATTTTTTAAATAAAAATATTAA‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTg                                                       <  2:5659667/128‑1 (MQ=255)
                                                                        cTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAA‑AA‑‑C‑‑TTTTTTTTTTTATTTGTAACTAAC‑ATAAAT‑ATTTACCAATTATTAGAATTTCAATTTAAAAGAGGAAtttc                                                      >  2:4305180/1‑126 (MQ=255)
                                                                        atttAAATTCAAATAAAATTATAAAAAGATAAATTTTTTAAATAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                      <  1:5617257/127‑1 (MQ=255)
                                                                           tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAAATAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                   >  1:487322/1‑128 (MQ=255)
                                                                           tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAAATAAC‑ATATAA‑TTTTAACAATTATTTGAATTTCAATTTAACATATGAATTGAttt                                                   >  2:5920174/1‑128 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGATttc                                                  >  1:5086022/1‑128 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAAATAAC‑ATATAA‑TTTTACCAATTATTATAATTTCAATTTCACAGATGAATTGAttta                                                  >  2:2223758/1‑127 (MQ=255)
                                                                            aaaTTAAAAAAAAATTATATAAATATAAATTTTTTAAATAAAAAAATTAA‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                  <  1:1494122/128‑1 (MQ=255)
                                                                              aTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAA‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCAAAAATGAATTGATttatt                                                >  1:1685599/1‑128 (MQ=255)
                                                                                      aaCATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGTAAATAAA‑ATAAAA‑TTTTAAAAATTATTATAATTAAAATTTAAAATATAAATTAATTTATTAtaataa                                         >  2:2533517/1‑128 (MQ=255)
                                                                                       aCATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGTAGAAAAA‑TTTAAA‑TTTAACAAAATATTTGAATTTAAATTGAACTAATTAatttattttgagtaataat                                        >  2:3378568/1‑117 (MQ=255)
                                                                                         aTTAAATAAATATAAATTTTTTAAATAAAAATATTA‑‑AA‑‑A‑AATTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTg                                     <  2:1693953/128‑1 (MQ=255)
                                                                                           ttttttaatttAAATTTTTTAAATAAAAAT‑TTTT‑AA‑‑A‑ATTTTTTTTTTTTTTTGTAACTAAA‑ATATAA‑TTTTACAAATTATTAGAATTTCAATTTAAAAGATGAATTTATTTCTTCTAATAATTTGTc                                   <  1:3992417/118‑1 (MQ=255)
                                                                                           ttaaaatataTAAATTTTTTATATAAAAATTATAC‑AA‑‑‑‑ATTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTc                                   <  1:2881516/119‑1 (MQ=255)
                                                                                             taataataTAAATTTTTTAAACTAAAATATT‑T‑AA‑‑A‑ATTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                 <  1:5839112/121‑1 (MQ=255)
                                                                                              ataaatataaatTTTTTAAATAAAAATTTTAA‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                <  2:6412824/128‑1 (MQ=255)
                                                                                              ataAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGCAA‑TAAA‑AATTAA‑ATTTACCAATTTTTTTAATTTAAAATTTAAATTTTAATTTAATTAATCTTATAAtttttaaatt                               >  2:491109/1‑121 (MQ=255)
                                                                                               aaaaGAAAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑ATTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtata                               <  1:902040/127‑1 (MQ=255)
                                                                                                 aaGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACATATGAATTGATTTCTTATAATAATTTGTAtaaatt                             >  2:5285734/1‑127 (MQ=255)
                                                                                                 aaGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAAAGAAC‑AAATAA‑TTTTACCAATTTTTATAATTTAAAATTAAAAAATGAATTAATTTATTATAAAAATTTTTatattat                             >  2:1192263/1‑125 (MQ=255)
                                                                                                  atttAAAATTTTTAAATAAAAATATT‑T‑AA‑‑A‑ATTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAg                            <  2:5519078/125‑1 (MQ=255)
                                                                                                     tataTTTTTTATAGAAAAATATTAT‑AA‑‑‑‑GTTTTTTTTTTTTTTTGGAAATAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                         <  2:6059081/125‑1 (MQ=255)
                                                                                                     tAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑‑TTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTATTAGAATTTAAATTTAACATATTAATTGATTTCTTCTAATAATTTGTATATATAGAtat                        >  1:6544538/1‑126 (MQ=255)
                                                                                                       aaTTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTATAATTTCAATTTCACAGATGAATTGATTTCTTCAAATAATTTTTCTATAAACATGt                        >  2:6854738/1‑128 (MQ=255)
                                                                                                        aTTTTTTAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATTAATTGATTTGTTATAATAATTTGTGTATTTAGATGttt                      >  1:6438254/1‑128 (MQ=255)
                                                                                                         ttttttAAATAAAAATATTAA‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttt                     <  1:4984942/128‑1 (MQ=255)
                                                                                                         ttttttAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGCAAGTTAC‑ATATTA‑TTTTAAAATTAATTTTAATTTGAATTTCACAGTTGAATGGAGTTCTGCTTATAATTTGTCTATTGAGAtttttt                     >  2:4020874/1‑128 (MQ=255)
                                                                                                          tttttAAATAAATATATTA‑‑AT‑‑A‑ATTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGttttt                    <  1:4194935/128‑1 (MQ=255)
                                                                                                           ttttAAATAAAAAAATT‑T‑AA‑‑A‑ATTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                   <  2:1348513/128‑1 (MQ=255)
                                                                                                            tttAAATAAAAATTTTAA‑AT‑‑A‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                   <  1:1821280/128‑1 (MQ=255)
                                                                                                            tttAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTTTTAGTATTTCAATTTCACAGTAGATTTGATTTATTCTAATTATTTGTCTATATAGATGGTATTta                  >  2:3743375/1‑128 (MQ=255)
                                                                                                            tttAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCATTTTCACAGATGAATTGATTTCTTCTAATAATTTTTAAATATAGATGTTTTTta                  >  1:2564039/1‑128 (MQ=255)
                                                                                                              taaataaaAATATTAT‑AA‑‑‑‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTatat               <  1:4726876/128‑1 (MQ=255)
                                                                                                              tAAAGAAAAATATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTATTAGAATTTAAATTTCAAATATTAATTGATTTATTATATTAATTTTTATATATATATTTTTTTtata                >  2:1964239/1‑128 (MQ=255)
                                                                                                               aaaGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTATTATAATTTAAATTTAAAATATGAATTGATTTTTTCTAATATTTTTTATATTTATATTTTTTTtatt                >  1:6756594/1‑127 (MQ=255)
                                                                                                               aaaGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAAATAAA‑ATAAAA‑TTTTACAAATTTTTAGAATTTCAATTTAACAAATTAATTGATTTCTTAAAAAAATTTGTATATATAAATTTTTTTtata                >  1:5346408/1‑128 (MQ=255)
                                                                                                                 aGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTTTAAAAAAA‑ATATAA‑TTTTACCAATTATTAAAATTAAAATTTAACAAATTAATTTATTTATAAAAATAATTTTTATATATAAATTTTTTTtattta              >  2:2844138/1‑125 (MQ=255)
                                                                                                                     aaaTATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGTAAATAAC‑ATATAA‑TTTTACCAATTATTAAAATTTAAATTTCACAGATGAATTGATTTCTTATAATAATTTGTCTATATATATGTTTTTTATATATAAAt         >  2:4710874/1‑128 (MQ=255)
                                                                                                                      aaTATTAC‑AA‑‑C‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACAAATTATTAGAATTTCAATTTAACATATGAAATTATTTATTATAAAAAATTATATATATATATTTTTTTTATATATAAAta        >  1:1601702/1‑127 (MQ=255)
                                                                                                                      aaTATTAC‑AA‑‑C‑‑‑TTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTATTATAATAATTTGTATATATAGATGTTTTTTATATCTAAAtaa       >  1:5437154/1‑126 (MQ=255)
                                                                                                                      aaTATTAA‑AA‑‑A‑‑TTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc        <  2:5796835/128‑1 (MQ=255)
                                                                                                                       atatTAC‑AA‑‑C‑‑‑TTTTTTTTTTTTTTGGAACTAAC‑ATTTAT‑TTTTACCAATTATTACATTTTCATTTACACAGTTTATTTGATTTATTCAAATAATTTTTCTATATATATGTTTTTTTTATATAAAACat      >  2:3500172/1‑127 (MQ=255)
                                                                                                                                   |                                                                                                                               
AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTAC‑AA‑‑C‑TTTTTTTTTTTTTTTTGGAACTAAC‑ATATAA‑TTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGAT  >  CP016816/76764‑77016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.