New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =1460 (0.570)852 (0.380) 170/220 6.3 41.9% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 1083 (0.480)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 2234 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                 |                                                                                                                                  
atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttt                                                                                                                                    >  2:3912684/1‑128 (MQ=255)
  atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGAAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATATC‑tttttt                                                                                                                                  >  1:3228822/1‑128 (MQ=255)
      attttAATTTATTTATCTAAAATGTATTAATTATTAATAAAATAAAACTTTTATATTTTTAGATATTTTTTGTATATTTAAA‑TTTTTAAAAAATTTATTTTAAATTTTAAAAAATATC‑tttttttttt                                                                                                                              <  2:5429439/126‑1 (MQ=255)
         ttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttt                                                                                                                           >  2:5534970/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttt                                                                                                                          >  2:5208012/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttt                                                                                                                          >  1:3892295/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttt                                                                                                                        >  1:1767538/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttt                                                                                                                        >  1:5028424/1‑128 (MQ=255)
             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTATTTTTAACTTGTAAAAAATATA‑ttttttttttttttttt                                                                                                                       >  2:1121618/1‑128 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttttaata                                                                                                                   >  1:3053883/1‑124 (MQ=255)
                  ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTtata                                                                                                                  >  1:4435588/1‑128 (MQ=255)
                     tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATATTTTTAGATATTTTTTATATAAGCAAA‑TTTTTAAAAAATTAATTAGAAATTGTAAAAAAAAG‑‑ATTTTTTTTTATATTTTTTATAAtaa                                                                                                              >  2:4064050/1‑126 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTTATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttttatatatta                                                                                                              >  2:3808806/1‑120 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttatattggaaa                                                                                                              >  1:686480/1‑118 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTtataatttaa                                                                                                              >  1:3782613/1‑122 (MQ=255)
                       tcACTTTTAATAATTAGAAATTAAAAAAAAATATTATATTTTTATAAATTTTTTTTTATTGTAAA‑TTTTTAAAAAATTAATTTTAAAATGTAAAAAA‑AAC‑CTTTTTTTTTTTTTTTTTTATAATGGaa                                                                                                            <  1:5537398/127‑1 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTtaatgtaaatat                                                                                                          >  2:268309/1‑118 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAatat                                                                                                        >  2:4494094/1‑128 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAttaaa                                                                                                       >  2:3415668/1‑126 (MQ=255)
                            tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATa‑a                                                                                                     >  2:192619/1‑128 (MQ=255)
                              tatttattattAATAAAATAAAAATTTTATTTTTTTATATATTTTTTTTTTATTAAAA‑TTTTTAAAAAATTTATTTTTAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTTATAATGGAAAtata                                                                                                       <  2:1435609/123‑1 (MQ=255)
                              tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑TTTTTTTTTTTTTTTTTTTATAATTTAAATaaa‑a                                                                                                     >  1:1985534/1‑128 (MQ=255)
                                 ttattattTAGTAAATAAAAATATTATCTTTTTTTATTTTTTTTTTATATTCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAg                                                                                              <  1:483472/126‑1 (MQ=255)
                                  tattattAATAAACTTAAAATATTATTTTTTTATAAATTTTTTTTATATTGAAA‑TTTTTTAAAAATTAATTTTAACTTGTAAAAAATTGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AAtttt                                                                                                <  1:4085993/127‑1 (MQ=255)
                                   attattAAGAACATAAAACTATTATGTTTTTAGTTATTTTTTTTTTATGCATA‑TTTTTAAAAAATTAATTTGAAATTTTAAAAAAATGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAg                                                                                              <  1:1820355/128‑1 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTA‑AATGTAAATATA‑ATTTTTAgtt                                                                                            >  2:4270772/1‑126 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTATTATAAAATTAAAATATA‑AAtttaact                                                                                             >  1:5441003/1‑124 (MQ=255)
                                     tAGTAAAAAACTAAAACTAATATCTTTTTAGATATTTTTTGTATATTCAAA‑ATTTTAAAAAATTAAATTGAACTTGTTAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGt                                                                                            <  1:1525335/128‑1 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATTTT‑AATTTTATGTa                                                                                           >  2:5312863/1‑128 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTAAAATGTAATAATA‑AATTTTAGTTAtttttt                                                                                     >  1:2943245/1‑126 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑ATGTAAATATA‑AATTTTATTTTTTtttttg                                                                                   >  2:784436/1‑128 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATTATTTAAATATA‑AATTTTAGTTATtttttt                                                                                    >  2:3542043/1‑128 (MQ=255)
                                              aataataatattatCTTTTTATATATTTTTTTTATATTGAAA‑TTTTTAAAAAATTAATTTTTAATTTTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTc                                                                                 <  2:2001316/120‑1 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAA‑AATTTTAGTTATtttttttt                                                                                  >  2:315091/1‑126 (MQ=255)
                                               ctaaaactaTTATCTTTGTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTATTTTTTTTTAAATTGTAAATATA‑AATTTAAGTAATTtttttgga                                                                                 >  1:2568231/1‑126 (MQ=255)
                                                taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TATTGAAAAAATA‑AATTTTATTTATtttttttt                                                                                  >  1:5213274/1‑126 (MQ=255)
                                                 taaaattttttttttttATATTATTTTTGTATATTCAAA‑TTTTTAAAAAATTAAATTTAAATTTTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAAAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTa                                                                               <  1:1105790/116‑1 (MQ=255)
                                                 aaaattaTTTTTTTTTTAGATATTTTTTGTAATTTTAAA‑TTTTTAAAAAATTAATTTGTACTT‑TTTAAAAT‑‑‑‑TTCTTTTTTTTTTTTTTTTATAATGGAAATATA‑ATTTTTAGGTATTTTGTTGTCTaa                                                                              <  2:1520091/128‑1 (MQ=255)
                                                 aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAAAAAA‑AATTTTAGGTATTTtgttgta                                                                                 >  1:4610362/1‑127 (MQ=255)
                                                 aaaaaaattattTTTTTTTATATTTTTTTTTTATTAAAA‑ATTTAAAAAATAAAATTTTTAATTTTTAAAAA‑AAT‑ATTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTc                                                                                 <  2:1032519/122‑1 (MQ=255)
                                                  taaattttatTTTTTTTGTTTTTTTTTTTTTATTCAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAAT‑‑‑‑TTCTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTaa                                                                              <  2:1724391/122‑1 (MQ=255)
                                                   aactaTTATCTTTCTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATTTAAATATA‑AATTTTATTTATTTTGTTGTCTAAGt                                                                            >  1:1193003/1‑128 (MQ=255)
                                                    aattttatatttttttatatttttTGTTTATTTAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAg                                                                             <  1:266236/124‑1 (MQ=255)
                                                      ttttatATTTTTATTAATTTTTTTATTATTAAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATc                                                                         <  2:2122891/126‑1 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTATTTTATTATGTAAATAAA‑AATTTAATTTATTTTTTTGTATaaa                                                                             >  2:3258376/1‑127 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTA‑AATGGAAATTTA‑AATTTTTTGTTTTgtgtttaataagtt                                                                           >  2:2466288/1‑119 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATATTGAAAAAATA‑AATTTTATTTATTTTTTTTTATAATTa                                                                           >  2:1617089/1‑128 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATA‑AATTTTATGTATTTTTTTTTATAATTa                                                                           >  1:4944327/1‑128 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATA‑AATTTTATTTATTTTGTTTTCTAATTAt                                                                          >  1:5098620/1‑128 (MQ=255)
                                                       attttttttttATATATTTTTTTTTTATTAAAATTTTTAAAAAAATAAATTTAAATTTTTAAAAAAT‑‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTa                                                                           <  1:2089694/122‑1 (MQ=255)
                                                       attattTTTTTATATATTTTTTGTATTTTTAAA‑TTTTTAAAAAATTAATTTGAAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTa                                                                           <  1:5271655/128‑1 (MQ=255)
                                                       attatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATAAA‑AATTTTAGGTATTTTGTTTTATAATTaaa                                                                         >  2:3047494/1‑126 (MQ=255)
                                                       attatAATTTTATAAATTTTTTTTATATTAAAT‑TTTTTAAAAATTAAATTTTAATTTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTAt                                                                          <  1:1914535/128‑1 (MQ=255)
                                                            atttttATATATTTTTTGTTTATGAAAA‑TTTTTAAAAAATTAATTTTTACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTaaaa                                                                    <  2:4712052/127‑1 (MQ=255)
                                                               tttttatatTTTTTTTATATTCAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                                 <  1:5351281/123‑1 (MQ=255)
                                                                tttttttttttttttATATTTATA‑TATTTAAAAAATTATTTTTATATTTTTAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGTAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                                 <  2:625289/121‑1 (MQ=255)
                                                                 tttatatTTTTTTTATTTTTAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATTGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                                 <  1:4679550/125‑1 (MQ=255)
                                                                 tatatatTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑‑‑‑‑TTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGaa                                                            <  2:5078595/125‑1 (MQ=255)
                                                                  aGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATAAA‑ATTTTTTGGTATTTTTTTTTATAATTATATAAAAAAATa                                                               >  2:2337969/1‑128 (MQ=255)
                                                                     tatTTTTTTTTTATCCAAA‑TTTTTAAAAAATTAATTTTAACTTTTTAAAAAT‑‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGaaa                                                           <  2:2831197/128‑1 (MQ=255)
                                                                            tttataTTCAAA‑TTTTTAAAAAATTAATTTTAAATTGTAAAAAATTGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaaa                                                     <  2:4413363/126‑1 (MQ=255)
                                                                            tGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTTATTGTAAATATA‑AATTTTAGGTATTTTTTTGTATATGTTTATAAAAAATTAaaaataaa                                                       >  1:2770643/1‑124 (MQ=255)
                                                                            tGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAA‑AATTTTATTTATTTTTTTTTATAATTTTAAAAAAAAATATaatttaaa                                                      >  1:3515354/1‑122 (MQ=255)
                                                                              tataTTAAAA‑TTTTTTAAAAATTAATTTGAAATTGTAAAAAATA‑‑‑‑TATTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑at                                                 <  2:869806/128‑1 (MQ=255)
                                                                               tttttataa‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAAT‑‑T‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑at                                                 <  1:3330528/121‑1 (MQ=255)
                                                                               atatGTAAA‑TTTTTAAAAAATTAATTTTTACTTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ata                                                <  1:1291834/128‑1 (MQ=255)
                                                                                  tGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATA‑AATTTTTTGTATTTTTTTGTATAATTATAAAAAAAAATATAAATTAAAAA‑Atttt                                              >  2:3693211/1‑128 (MQ=255)
                                                                                         ttttttaaaaattaattTGAACATGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTaaaa                                       <  1:4539038/119‑1 (MQ=255)
                                                                                                 aaattaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATA‑AATTTTAGGTATTTTGTTGTATAAGATTATAAAAAAATAAAAAGTAAAAA‑ATTTTTTTAAAATTATTAc                                >  1:2290114/2‑128 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTATATTTTAAATAAA‑ATTTTTTGGTATTTTGTTGTATTATTATATAAAAAATTATAATTTATAAA‑ATTTTTTTAAAATTAAt                                  >  1:2468299/1‑128 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTAAGGTATTTTGTTGTCTAATTTTATAAAAAAATAGAAAGAAAAAA‑ATATTGTTAAAAGTAATaat                               >  2:4173341/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑AATGGAAATATA‑AATTTTTGTTAATTTTTTGTATATTTATCTAAAAAAATATAATTTAAAAATATATT‑TTAAATTTAATaat                               >  1:3723854/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTTTTTTATAATTATATAAAAAAATATAATGGAAAAA‑ATATTTTTAAAAataataat                               >  2:4897950/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAAGGGAAA‑ATATAATTTTAGGTTTTTTTTTGGATTATTATCAAAAAAAAAAGAAAGTAAAAA‑ATATTGTAAAAAttattaaaa                              >  2:4987719/1‑125 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑ATTGAATAT‑TA‑AATTTTTTGTATTTTTTTTTATAAGTATAAAAAAAAATTTAAAGTAAAAA‑ATTTTTTTAAAAGTAATaaaaa                             >  2:2225130/1‑124 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATATTTAAAATATA‑ATTTTTATTTTTTTTGTTGTATATTTATATAAAAAAATATAAATTAAAAT‑ATTTTTTTaaaatataataaa                              >  1:4748046/1‑119 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATA‑ATTTTTAGGTATTTTTTTTTATAATTATATAAAAAAATATAAAGGAAAAA‑ATATTGTTAAAAGtaataat‑aa                            >  1:1379792/1‑128 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAATTATA‑AATTTTATGTTTTTTGTTGTAAAATTTTATAAAAAAATATAAAGAAAAAA‑AAATTTTTAAAATTAAAAAT‑aa                            >  1:4003404/1‑128 (MQ=255)
                                                                                                     taattTTTACTTGTAAAAAAAA‑‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑aaa                           <  1:2175945/128‑1 (MQ=255)
                                                                                                       attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑ATTTTTAGGTTTTTTTTTGTATAAGTTTCTAAAAAATTATAAAGTAAAAA‑TTTTTTTTAAAATTAATAAA‑AAAat                         >  1:4161060/1‑128 (MQ=255)
                                                                                                          tGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTAttt                    <  2:4574285/128‑1 (MQ=255)
                                                                                                             aCTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTTTTTTTTTGTAAAATAAACAAAAAAAAAAAAAAGTAAAAA‑TTATTTTTAAATTTAAAAAA‑AAATTTATTTaa                  >  2:1828254/1‑128 (MQ=255)
                                                                                                              cTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑TGGATATATA‑AATTTTTGGTTTTTTTTTTTATAAGTATAAAAAAAATTAAAATGTAAAAA‑AAAATTTTATAATTAATAAT‑AAAatttaatat                  >  2:1253612/1‑122 (MQ=255)
                                                                                                              cTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAATTTTA‑ATTTTTAGTTATTTTTTTGTCTAATTATATAAAAAATTATAATGTAAAAA‑AATTTTTTAATATTAATAAT‑AAAATTATTTa                   >  1:2856865/1‑128 (MQ=255)
                                                                                                                tGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑TGTAAAT‑TA‑AATTTTTTGTTTTTTTTTTTTTTAATTTTTTAAAAAAAATAAAATAAAAA‑ATTTTTTTTAAAATAATAATAAAAATTATTTAAtt                >  1:3147357/1‑127 (MQ=255)
                                                                                                                tGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TATTGTAAATAAA‑AATTTTTGGTTTTTTTTTGTATAATTAAATAAAAAAATAAAAAGAAAAAA‑ATATTTTTAAAATAAATAAA‑AAAATTATTTAAt                 >  2:1339717/1‑128 (MQ=255)
                                                                                                                 gTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTTTATAAAAAAATAGAAATAAAAAA‑ATATTTTTAAAATTAATAAT‑AAAATTATTTAAAGt               >  1:4248208/1‑128 (MQ=255)
                                                                                                                  tAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAATTATA‑AATTTTAGGTTTTTTGTTTTATAATTTTATAAAAAATTATAAATTAAAAA‑ATATTTTTAAAATTAATAAT‑AAAATTATTTAAtttt              >  1:101061/1‑128 (MQ=255)
                                                                                                                      taaatttttttttttttttttttttttATAATGGAAATATA‑AATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAATGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGtta             <  1:341773/120‑1 (MQ=255)
                                                                                                                         tAGC‑TTTTTTTTTTTTTTTTTTTTAAATTTAAATAAA‑AATTTTAGTTTTTTTTTTTTATAATTAAAAAAAAAAATAAAAAGAAAAAA‑AATTTTTAAAAATTAATAAA‑AAAATTATTTAATtttattta         >  2:2539277/1‑128 (MQ=255)
                                                                                                                          tttttttttttttttttttttttATAATTTAAATATA‑AATTTTATGTATTTTGTTGTATAAGTATCTAAAAAAATAGAAATTAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGttaatta         <  1:86084/124‑1 (MQ=255)
                                                                                                                          tatatttttttttttttttttttATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGttaatta         <  1:1629777/124‑1 (MQ=255)
                                                                                                                          aatagctttttttttttttttttATAATGGAAATATA‑AATTTTATTTATTTTTTTGTATAAGTATATAAAAAAAATGAATAGAAATA‑AAATTGTTAAAAGTATTAAT‑AAAATTATTTAATGttattta         >  1:4336053/7‑128 (MQ=255)
                                                                                                                          aaatatgttttttttttttttttATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGttaatta         <  1:2362493/121‑1 (MQ=255)
                                                                                                                           atagctttttttttttttttttATATTAGAAAAAAA‑AATTTTATTTATTTTTTTGTCAAATTAAAAAAAAAAAAAAAAAATAAAAA‑ATTATTTTAAAATTAAAAAA‑AAAATTTTTTATTGttaattaa        >  2:294762/6‑128 (MQ=255)
                                                                                                                            tagctttttttttttttttttATAATTTAAATATA‑AATTTTTTGTTTTTTTTTTTATATTTATATAAAAAAATATAAAGTAAAAA‑AAATTTTTAAAAGTAATAAT‑AAAAATATTAAATTttaaaagat       >  1:620314/5‑123 (MQ=255)
                                                                                                                             gcttttttttttttttttttATAATGGAAATAAA‑AATTTTAGGTATTTTGTTGTAAAATTATATAAAAAAATAGAAAGGAAAAA‑ATATTTTTAAAAGAAATAAA‑AAAATTATTTAATGTTAATTaaaa      >  2:4800989/3‑128 (MQ=255)
                                                                                                                               ttttttttttttttttttATAATTGAAATATA‑AATTTTATGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGTTAATTAAAACt    <  1:784256/128‑1 (MQ=255)
                                                                                                                               ttttttttttttttttttA‑AATGGAAAATTA‑AATTTTATGTATTTTTTTTTATAATTAAATAAAAAAATAAAAAGGAAAAA‑ATATTTTTAAAATTAAAAAA‑AAAATTATTTAATTTTTATTAAAAAtt   >  1:3636764/1‑128 (MQ=255)
                                                                                                                                tttttttttttttttttATTATGGAAATATA‑AATTTTAGGTATTTTGTTGTATAAGTATATAAAAAAATAGAAATGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGTTAATTAAAACtt   <  1:953040/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                  
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATA‑AATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAA‑ATATTGTTAAAAGTAATACT‑AAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.