New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =359 (0.140)1169 (0.550) 197/208 0.9 79.7% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 298 (0.140)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

Only 100 of 1883 total aligned reads displayed.

GTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311028‑311280
                                                                                                                             |                                                                                                                               
accagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattat                                                                                                                               <  1:293758‑M1/3‑1 (MQ=255)
accagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattat                                                                                                                               <  1:2139764‑M1/3‑1 (MQ=255)
accagttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattatacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacaaatatatcatacattcattaa                                                                                                                               <  2:4637629‑M1/3‑2 (MQ=255)
  tGTAATAAATAATATAAATTTAATTAAAAATTTTTATAACTTTTTCATTTTAGACACCCCTTATTAAAAAATAAAATACTTGTTTTATACGATTCAAAACATATATAACATACATTAATtatatatat                                                                                                                             <  2:1949425/128‑1 (MQ=255)
    tttgtaataaataatacaattgatattaaaattgtaattaactttttcattttacacaccactttttaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatat                                                                                                                           >  2:1887560‑M1/122‑128 (MQ=255)
    taataaCTAATCCAAATGATATTAAAATTTTAATTAACTTTTTCATTTTACACACCACTTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAAAATATATAACATACATTCATtatatatatat                                                                                                                           <  2:2891764/128‑1 (MQ=255)
     ttgtaataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaacacatatataacatacattcattatatata                                                                                                                          <  2:4535522‑M1/8‑1 (MQ=255)
          ataactaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatat                                                                                                                     <  2:1185682‑M1/13‑1 (MQ=255)
           taactaataaaaatttacttaaaattgtaattatatttttcattttacacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatata                                                                                                                    >  2:535702‑M1/115‑128 (MQ=255)
           aaatttatcaaaattaacttaaaattgtaattatattttttattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatata                                                                                                                    >  2:2360678‑M1/115‑128 (MQ=255)
              ctaatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatat                                                                                                                 <  1:858001‑M1/17‑1 (MQ=255)
               taatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatata                                                                                                                <  1:3630092‑M1/18‑1 (MQ=255)
               taatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatata                                                                                                                <  2:1750105‑M1/18‑1 (MQ=255)
                 atccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatata                                                                                                              <  1:1848663‑M1/20‑1 (MQ=255)
                 atccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatata                                                                                                              <  2:5541093‑M1/20‑1 (MQ=255)
                  tccaaattaacttaaaattgtaattaactttatcattttacacacaccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                             >  1:3159635‑M1/108‑128 (MQ=255)
                  tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                             >  1:4132394‑M1/108‑128 (MQ=255)
                     gAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatataatta                                                                                                          >  1:3842050/1‑124 (MQ=255)
                      aatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatataatgaa                                                                                                         <  2:1661806‑M1/25‑6 (MQ=255)
                      aatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATg                                                                                                         <  2:5252068‑M1/25‑1 (MQ=255)
                             ttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatactattcaaaacatatataacatacattcatTATATATATATATATATATATAATACaatata                                                                                                  <  1:3240211‑M1/32‑2 (MQ=255)
                             ttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTa                                                                                                <  2:2288712‑M1/32‑1 (MQ=255)
                             aaTTTTAATTAAATTTTTAATATTTCACACACCATATTAAAAAATAAAATATTTGTTATATATTATTAAAAAAATATATATCATATATTCATTATATATATATATATATATATATATAATGCAATATg                                                                                                  <  2:514170/128‑1 (MQ=25)
                                aaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGAAATATTTAAAt                                                                                             <  2:2532503‑M1/35‑1 (MQ=255)
                                aaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcaaTATATATATATATATATATATAAATCAATATGTaa                                                                                               <  1:3057037‑M1/35‑1 (MQ=255)
                                aaattgtaaataactttttcattatacacaacccttattaaaaaataaaatacttgttacatactattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTaa                                                                                               >  1:1112582‑M1/94‑128 (MQ=255)
                                  attgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATTTAAAt                                                                                             <  2:3720270‑M1/37‑1 (MQ=255)
                                   ttgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATAATTATAATGCAATATATAAATg                                                                                            <  2:4250403‑M1/38‑1 (MQ=255)
                                     gtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATGTAAATGaa                                                                                          <  1:1636076‑M1/40‑1 (MQ=255)
                                         atttttAATTTTAAAAACCAATTATTAAAATAAAAAATATTTTTTATATACTATTCAAAATATATATAACATAAATTCTT‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGt                                                                                  <  2:4858547/127‑1 (MQ=255)
                                          taactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAatat                                                                                     <  1:948232‑M1/45‑1 (MQ=255)
                                           aactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATGTAAATGAAAATATg                                                                                    <  1:5124116‑M1/46‑1 (MQ=255)
                                           aactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATAAAATATTTAAATTaaaatatatt                                                                                  <  1:2042556‑M1/46‑4 (MQ=255)
                                            actttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAAATAAATATATAAATTAaaatatta                                                                                   <  1:1934864‑M1/47‑3 (MQ=255)
                                                tttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATATTAAAATATGTATAAGAAAATATGGtata                                                                               <  2:3615545‑M1/51‑1 (MQ=255)
                                                tttaattttaaacatcacttattaaaaaataaaataatttttatatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtata                                                                               >  1:4491315‑M1/78‑128 (MQ=255)
                                                aTTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATAAAAATATGGTataat                                                                             >  2:1430380/1‑128 (MQ=255)
                                                 ttttACACACAAATTATTAAAAAATAAAATTCTTTTTATATACGATTCAAAAAATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataata                                                                            <  2:3842050/128‑1 (MQ=255)
                                                   ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATAAAAATAAATATATAAATTAAAATATTTTataatatc                                                                          >  1:654496/1‑126 (MQ=255)
                                                    attttacacacccattattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAg                                                                           >  1:3501052‑M1/74‑128 (MQ=255)
                                                       ttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCaa                                                                        <  1:3109409‑M1/58‑1 (MQ=255)
                                                       ttacacaccacttattaaaaaataaaatacttgttaaataagattaaaaaaatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCaa                                                                        >  1:2853910‑M1/71‑128 (MQ=255)
                                                       ttaaacacaccttattaaaaaataaaataatttttacatactattaaaaaaatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCaa                                                                        >  2:811901‑M1/71‑128 (MQ=255)
                                                         acacacaaattattaaaaaataaaatacttgttaaataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAAcc                                                                      >  1:2492820‑M1/69‑128 (MQ=255)
                                                         aaaacTTATTAAAAAATAAAATAATTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                                    <  2:2595431/124‑1 (MQ=255)
                                                          aacaaacataattaaaaaataaaatacttgttacataagattaataacatatataacatacattcatTATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                 >  1:2304433‑M1/68‑128 (MQ=255)
                                                           caaatttaaaaaaaTAAAATATATTTTTTATAATATTATAAACATATATAAAATACAT‑‑‑TTATTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                <  1:4274902/120‑1 (MQ=255)
                                                             cTTATTAAAAAATAAAATAATTGTTAGATAATATTCAAAACATATATAAAATAAATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                <  2:646773/128‑1 (MQ=255)
                                                             accccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                >  2:105140‑M1/65‑128 (MQ=255)
                                                              caacttatttaataatataataatttttacatactattcaaaaaatatataaaatacattcatTATATATATATATATATATATAATGCAATATGTATATGAAAATATGGTATAATAGCAACCGTTta                                                                 >  1:2589200‑M1/64‑128 (MQ=255)
                                                                ccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTAAATATTTAAATTAAAATATGATATaatatcaacatattata                                                               <  2:2197450‑M1/67‑9 (MQ=255)
                                                                  ttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATAAAAATATGGTATAATAGCAACCATATATaaa                                                             <  2:2444268‑M1/69‑1 (MQ=255)
                                                                  ttattaaaaaataaaataattgttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                             >  1:459799‑M1/60‑128 (MQ=255)
                                                                   tattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAAGCGTTTATAAAg                                                            <  2:3372045‑M1/70‑1 (MQ=255)
                                                                   tattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                            <  1:4364794‑M1/70‑1 (MQ=255)
                                                                    attaaaaaataaaatatttgttacataagattcaaaacatatatatcatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                           >  2:1550245‑M1/58‑128 (MQ=255)
                                                                    attaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATTCAATATTTAAATAAAAATATGTTATTATAGCAACAGTTTATAAAGt                                                           <  2:907014‑M1/71‑1 (MQ=255)
                                                                    attaaaaaataaaataattgttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                           >  2:328181‑M1/58‑128 (MQ=255)
                                                                       aataaaataaTTGATAAATAAGATTCTATACATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATAATTCAATATGTAAATGAAAATATTGTATAATAGCAACCTTTTATAAAGTaaaaaaa                                                    <  1:172745/128‑1 (MQ=255)
                                                                       aaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATGTAAATGAAAATATTTTATAATAGCAACAGTTTATAATGTaaa                                                        <  2:2110516‑M1/74‑1 (MQ=255)
                                                                         aaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATGTAAATGAAAAAATGGTATTATATCAAAATTTTATATATTaaaaa                                                      <  2:1123094‑M1/76‑1 (MQ=255)
                                                                           aaataATTTTTATATAAGATTATAAAAATATATAAAATATATTCA‑‑ATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                                  <  1:5343054/128‑1 (MQ=255)
                                                                             taaaatatttgttaaataagattaaaaatatatataacatagattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                                  >  2:3177864‑M1/49‑128 (MQ=255)
                                                                                 ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACAGTATATAAAGTAAAAAAATAGTAAat                                            >  2:3509671/1‑128 (MQ=255)
                                                                                  tacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                             >  1:1311452‑M1/44‑128 (MQ=255)
                                                                                  tGTTACATAATATTAAAAACATATATAACAAACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  2:5449383/128‑1 (MQ=255)
                                                                                   aattgttacataatattaaaaaaatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                            >  2:4756762‑M1/43‑128 (MQ=255)
                                                                                    ttACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATTAAATATGTAAATTAAAATATTTTATAATAGAAACATTTTATAAAATAAAaaaatataaaatatt                                         >  1:1009183/1‑127 (MQ=255)
                                                                                    cttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAata                                           <  2:2664172‑M1/87‑1 (MQ=255)
                                                                                     ttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATTAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAAAAGTAAatat                                          <  1:1239081‑M1/88‑1 (MQ=255)
                                                                                      tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGAAATATATAAATTAAAATATGTTATAATACAAACCTTATATAAATTAAAAAAAAATTAAAtata                                         <  1:5513402‑M1/89‑1 (MQ=255)
                                                                                          acatacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAATTAAAAAAATAGtaaatataataa                                     <  1:4002760‑M1/93‑5 (MQ=255)
                                                                                          acataatattcaaaacatatataacataaaaagatTATAAATTTATATATATATATAATGAAATATTTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtactac                                     >  2:4345786‑M1/36‑128 (MQ=255)
                                                                                            atacgattcaaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATCAAAATATGGTATAATAGCAACCGATTAAATAGTAAATAAATACTAAATATACAACtt                                   <  1:4831461‑M1/95‑1 (MQ=255)
                                                                                             taatattcaaaaaatatataaaataatttattTATATATATATATATATATATAATGAAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                                  >  2:4434251‑M1/33‑128 (MQ=255)
                                                                                              aatattcaaaaaatatataacataaattaatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                                 >  1:4719744‑M1/32‑128 (MQ=255)
                                                                                               cgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATACTATATATACTACAtattaa                              <  1:2769555‑M1/98‑3 (MQ=255)
                                                                                                gattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGATTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAc                             <  1:3739621‑M1/99‑1 (MQ=255)
                                                                                                   tttaaaaatatatataatatatttatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACt                            >  2:4089769‑M1/27‑128 (MQ=255)
                                                                                                    caaaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGATTATAAAGTAAAAAAATAGTAAATATAAATCTTATATACta                           <  1:1556579‑M1/103‑1 (MQ=255)
                                                                                                    caaaacatatataaaataaattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGATTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                         >  1:2208583‑M1/26‑128 (MQ=255)
                                                                                                    aCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATTCAATATATATATTAAAATATTTTATAATAACAACCTTTTATAAATTAAAAAAATATTAAATATAATACTTATTTTCtaaaaa                       >  2:310311/1‑128 (MQ=255)
                                                                                                     aaaatatatataataaatttttttTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                          >  2:2781648‑M1/25‑128 (MQ=255)
                                                                                                     aaaacatatataacatacattcatTATATATATATATATATATATAAAGAAATATTTAAATGAAAATATGGAATAATATCAAAAGTATATAAAGTAAAAAAATAGTAAATATACTACATATatacaaa                          <  2:4193649‑M1/104‑4 (MQ=255)
                                                                                                      aaacatatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATATACTAATTATTTACtaat                         <  1:748020‑M1/105‑1 (MQ=255)
                                                                                                       tacataACATACATTCATTATA‑‑‑AATATATATATAAATATAATCAAATATATAAAATAAAATATTTTATAATAGCAAACGTATATAAAGTAAAAAAATATTAAATATAGTAATTATTTACTAATAAAAt                    >  1:5012225/4‑128 (MQ=255)
                                                                                                         catatataacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAATAAAAAAATATAAAATATAATaattatttaaaaaaaaa                      <  2:396846‑M1/108‑9 (MQ=255)
                                                                                                           tatataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                  >  2:725518‑M1/19‑128 (MQ=255)
                                                                                                            atataacatacattcatTATATATATATATATATATATAAAGCAATATGTAAATGAAAATATTGTATAATAGAAACAGTATATAAAGTAAAAAAATATAAAATATACTAATTATATACTAATAAAATc                   <  1:5244791‑M1/111‑1 (MQ=255)
                                                                                                             tataacatacattcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                >  1:2690603‑M1/17‑128 (MQ=255)
                                                                                                               taacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                <  2:4943668‑M1/114‑1 (MQ=255)
                                                                                                               taacatacattcatTATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt            >  1:1408149‑M1/15‑128 (MQ=255)
                                                                                                                aacatacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtt               <  2:2984505‑M1/115‑1 (MQ=255)
                                                                                                                  catacattcatTATATATATATATATATATATAATGCAATATGTAAATTAAAATATGTTATAATATAAAAAGTTTATAAATTAAAAAAATATTAAATATAATAATTATTTACTAATAAAATATAtttt             <  1:2384790‑M1/117‑1 (MQ=255)
                                                                                                                   atacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt            <  1:494752‑M1/118‑1 (MQ=255)
                                                                                                                    tacattcatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTttta           <  1:3381537‑M1/119‑1 (MQ=255)
                                                                                                                         attatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATATAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa      >  2:2036759/3‑128 (MQ=255)
                                                                                                                         acatTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATATAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa      >  2:3453076‑M1/5‑128 (MQ=255)
                                                                                                                          catTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAAACGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAATAAAATCTATATTTATTTaaa     <  2:5007237‑M1/125‑1 (MQ=255)
                                                                                                                           atTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTATTAAAATCTATTTTTATTTaaaa    <  2:1284936‑M1/126‑1 (MQ=255)
                                                                                                                             |                                                                                                                               
GTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311028‑311280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.