New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 203895576 (0.260)331 (0.130)
+TTT
96/214 17.8 34.4% intergenic (+279/+179) JCVSYN2_00845/JCVSYN2_00850 lipoprotein/inorganic diphosphatase
?CP016816 203896 = 633 (0.250)intergenic (+280/+178) JCVSYN2_00845/JCVSYN2_00850 lipoprotein/inorganic diphosphatase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1042 total aligned reads displayed.

TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA  >  CP016816/203769‑204023
                                                                                                                                     |                                                                                                                                   
ttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTTTACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑t                                                                                                                                     >  2:4981730/1‑128 (MQ=255)
 tAATTTTTTTTATAAAAAAAAATAAAAATTTTTAATTTAAATCAATTTTTAAAAAATTTTATTTTTTTTGTTTTTTTTTTTAATTTTAAAAATTTAAAATCTTTTAAATTGTTTTTTTTTTGCTtt‑‑‑‑tt                                                                                                                                    <  2:822003/128‑1 (MQ=255)
   aatttttttATAAAAAAAAAAAAAAATTTTTAATTTAAATTCTTTTTTAAAAAATCCTTTTTTTTTTGTTTTTTTTTATAATTATAAAAATTAAAACGCTTTAAAATTGTTTTTTTTTGGGTtt‑‑‑‑tttt                                                                                                                                  <  2:374784/126‑1 (MQ=255)
      ttttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑ttttttt                                                                                                                               >  1:4504725/1‑128 (MQ=255)
      ttttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCAATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTAG‑‑‑‑ttttttt                                                                                                                               >  2:1062159/1‑128 (MQ=255)
       tatttATAAAAAAAAAAAAAATTTTTTAATTAAAAGCCATTTCTAAAAAACCCTAGGTTCTAGGCTTTTTATTAATATTATCAAAATTACACCGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑tttttttt                                                                                                                              <  2:2287721/126‑1 (MQ=255)
        ttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACACTTTCAAAGTGTATTTTTTAGTCTTG‑‑‑‑ttttttttt                                                                                                                             >  1:4360014/1‑128 (MQ=255)
         ttataaaaaaaaaaTAAAAATTTTTAATTAAAAGCACTTTGTAAAAATCCCTATTTTAAATGATTTTTATTAAAATTTTCAAAATTACAACGCTTTAAAATTTTTTTTTTTTGGCTTG‑‑‑‑tttttttttt                                                                                                                            <  2:1927751/123‑1 (MQ=255)
           tataAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATGACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑tttttttttatt                                                                                                                         >  2:3570606/1‑128 (MQ=255)
             taAAAAAAAATAAAAATTTTTAATTTAAACCCCTATTTAAAAAATCCTATGTTCTAGGCTTTTTATTATAATTATCAACATTACAACGCTTTCAAATTGTATTTTTTAGGCTTG‑‑‑‑tttttttttttttt                                                                                                                      <  1:5279683/128‑1 (MQ=255)
              aaaaaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATTCTTATCAACAGTACAAAGCTTTCAAAGTGTATTTATTAGGCttg‑‑‑‑ttttttttgtttttt                                                                                                                     >  1:821649/1‑128 (MQ=255)
              aaaaaaaaaTAAAAATTTTTAATTTAAATCCATTTTTAAAAAACCATATTTTCTAGGCTTTTTATTATACTTATCAAAAATACAACGCTTTTAAATTTTATTTTTTATGGTTG‑‑‑‑ttttttttttttttt                                                                                                                     <  2:4369423/128‑1 (MQ=255)
               aaaaaaaaaaaaaaTTTTTTATTTAAATCCATTTTTAAAAAATCCAATGTTGAATTCTTTTTATTTTAATTATAAAAATTAAAACGCTTTAAAAGTTTATTTTTTTGGGTtt‑‑‑‑tttttttttttttttt                                                                                                                    <  2:4705139/128‑1 (MQ=255)
                 aaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑tttttttatttttttttt                                                                                                                  >  2:2639004/1‑126 (MQ=255)
                 aaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑cttttttttttttttttt                                                                                                                  >  1:4436819/1‑126 (MQ=255)
                  aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑ttttttttttttttttttt                                                                                                                 >  2:1448121/1‑125 (MQ=255)
                  aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑tttttttttttttttttgt                                                                                                                 >  1:3072583/1‑125 (MQ=255)
                    aaataaaaatTTTTTTTTTAATTCAATTTGTAAAAAATCCTATTTTTTAGGTTTTTTTTTATACTTATAAAATTTACAACGCTTTAAAATTGTATTTTTTAGGCTTG‑‑‑‑tttttttttttttttttgtaa                                                                                                               <  2:246134/128‑6 (MQ=255)
                    aaataaaaatTTTTAAATTAAACACATTTTTAAAAAACCATTTTTTTTTTGCTTTTTATTTTAATTATCAAAATTACAACGCTTTAAAATTGTATTTTTTAGGCTtt‑‑‑‑tttttttttttttttttgtaa                                                                                                               <  1:3325789/128‑6 (MQ=255)
                     aataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTaaaa                                                                                                            >  1:3413739/1‑128 (MQ=255)
                        aaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑ttttttttttttttttttttaaaat                                                                                                           >  1:4145683/1‑119 (MQ=255)
                         aaaatTTTTTATTTAAATCCATTTGTAAAAAATCCTATGTTTAATGCTTTTTATTATAATTATAAACATTACAACGCTTTCAAATTTTTTTTTTTTGGCTTTT‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                         <  2:3141403/128‑1 (MQ=255)
                         aaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTAAAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑tttttttttttttttttttataaata                                                                                                          >  2:5289991/1‑118 (MQ=255)
                         aaaatTTTTAATTTTAATACATTTGTAAAAAATTCTATTTTTTAGTGTTTTTATTTTAATTATAAACAATACAACGCTTTAAAAGTGTTTTTTTTTTGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATa                                                                                                         <  2:559969/128‑1 (MQ=255)
                         aaaatTTTTAAATTTAACCCATTTGATAAAAAGCATATTTTCTAGGGTTTTTATTATTATTATAAACAATACAACGCTTTTAAAGTGTTTTTTTTTGGCTTGTT‑‑TTTTTTTTTTTTTTTTGTAAAAAt                                                                                                          <  1:4901671/128‑1 (MQ=255)
                           aatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATaaa                                                                                                       >  1:4218469/1‑128 (MQ=255)
                             tttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTAAAAAAAAAATTa                                                                                                   >  1:1674811/1‑128 (MQ=255)
                              ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTTAAAATtaaaatt                                                                                                   >  2:4779911/1‑125 (MQ=255)
                              ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTAAAAAATAAAAGTa                                                                                                   >  1:1109290/1‑128 (MQ=255)
                               ttttATTTAAATAAATTTGTAAAAAATGTTATGTTCTATTCTTTTTATTATACTTATAAACATAACAACTCTTTCAAATTGTATTTTTTATGCTTTT‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTa                                                                                                   <  1:2647773/128‑1 (MQ=255)
                               tttCATTTATATCCATTTTTAAAAAAGCGTTTGTTCTAGTGTTTTTATTTTACTTTTCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTa                                                                                                   <  1:5040340/128‑1 (MQ=255)
                               attaaTTTAAATCCATTTGTAAAAAAGCCTATGTTCTAGTCTTTTTATTATAATTATCAACATTACAACGCTTTAAAATTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTa                                                                                                   <  1:658037/124‑1 (MQ=255)
                                  taTTTAAATCCATTTTTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGAt                                                                                               <  2:4427142/127‑1 (MQ=255)
                                   aTTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTATAATAAATGTAAAAttt                                                                                             >  2:1589612/1‑128 (MQ=255)
                                    tttAAATACATTTTTAAAAAATCATATTTTTTATTTTTTTTATTATAATTATAAAAATTAAAAAGCTTTCAAATTTTATTTTTTTGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGAtt                                                                                              <  1:5186771/128‑1 (MQ=255)
                                     ttAAATTCATTTTTAAAAAATTATATTTTTTATTATTTTTATTATAATTATCAAAATTAAAAAGATTTAAAAGTTTTTTTTTTAGGCTTGTT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGAtt                                                                                              <  1:1785063/128‑1 (MQ=255)
                                      tAAATCCATATTTAAAAAATCCTATGTTCTATGTTTTTTATTATACTTATAAAAATTACAACGCTTTCAAAGTGTATTTTTTTGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTg                                                                                            <  2:4537869/128‑1 (MQ=255)
                                      tAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTTATATTTgg                                                                                           >  1:1883312/1‑128 (MQ=255)
                                        aaGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTAATATTTTGAt                                                                                         >  1:2861709/1‑128 (MQ=255)
                                           acATTTTTTAAAAATCATATTTTTAATGTTTTTTATTAAAATTATAAAAATTTAAACCCTTTAAAATTTTTTTTTTTTTGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCa                                                                                       <  2:522292/127‑1 (MQ=255)
                                             aTTTTTTAAAAACCATATTTTTTATGTTTTTTTTTTTTATTATAAACTTTAAAACGTTTTTAAATGTTTTTTTTTTTGATTT‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAAcc                                                                                    <  1:1294563/128‑1 (MQ=255)
                                                tttAAAAAAGCCTATTTTATTTGTTTTTTATTATACTTATAAACATTAAAATTCTTTCAAATTGTTTTTTTTTGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCaaa                                                                                 <  2:2713973/126‑1 (MQ=255)
                                                 gTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTGTAAAAATAAAAGGAAGATTTGGTTCAACCaaata                                                                               >  1:1190257/1‑126 (MQ=255)
                                                   aaaaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGGAACAAACaaaa                                                                                >  2:2005389/1‑128 (MQ=255)
                                                     aaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAATTAAAAGTAAGATTTGGAAAAAACaaaaaat                                                                             >  1:5225661/1‑125 (MQ=255)
                                                       aaGCCTATGTTTTAGGCTTTTTTTTATAATTATAAAAATTACAACGCTTTAAAATTTTATTTTTTAGGTTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACtata                                                                           <  2:5447827/128‑1 (MQ=255)
                                                         gCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAATAAGATTTTGATAAACCaaaaatttttc                                                                         >  1:353167/1‑121 (MQ=255)
                                                            atttttttagttttttttttATAATTATAAACATTAAAAAGTTTTTAAATTGTATTTTTTTGGGTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCaaa                                                                      <  2:3393109/116‑1 (MQ=255)
                                                              tGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAATTTTTGAAAAAACAAAAATATATAaaaaaa                                                                   >  1:5332028/1‑128 (MQ=255)
                                                                ttCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTTTTTTTTTTTTTTTTTTTTTTAAATAAAAGTAATATTTGGAACAACAAAAAATATAACaaaaa                                                                    >  1:5406323/1‑128 (MQ=255)
                                                                ttCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTT‑‑TTTTTTTTTTTTTTTTTTAATAATAAAATTAATATTTTGAATAAACAAAAATATATCaaaaaa                                                                   >  2:1296390/1‑128 (MQ=255)
                                                                acatAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAGATTTGGTTCAACCAAAACTATataaaataaa                                                                  >  1:4634988/4‑128 (MQ=255)
                                                                 tCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAGATTTGTATCAACAAAAAatattaaaaataaat                                                                 >  1:3873994/1‑117 (MQ=255)
                                                                  atAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTATTTTTAAAAAAAAAATATATATTTTGATAAAAAAAAAAATTATAAAAAAAAtt                                                                >  1:4042672/2‑128 (MQ=255)
                                                                   tAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAAGTAATATTTGGATAAACAAAAAGTAATTAAAAAAAATTaa                                                              >  1:2434320/1‑128 (MQ=255)
                                                                    tttattatttttatAATTATCATAATTACTAAGTTTTATAATTTTATTTTTTTGGTTTG‑‑‑‑TTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaaa                                                            <  2:2158208/118‑1 (MQ=255)
                                                                    aGGATTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGTCTATT‑‑‑‑ATTTTTTATTTTTTTTATAAAAATAAAATTAAAAATTGTAAAAACAAAAACTAAATAAAAAAAATaaa                                                              >  1:2393571/1‑128 (MQ=255)
                                                                     ggCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAAAATTGGAAAAACaaaaaaattaaaaaaaaaattaaa                                                             >  1:754177/1‑128 (MQ=255)
                                                                           ttattaAACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAAAATAAAATTAAGATTTTGAAAAACTAAAAATATATAAAAAAATATaaaaaaaaa                                                       >  1:5532058/1‑127 (MQ=255)
                                                                              ttatACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTATTTTTTTAAAAAAAAAAATAAATATGTATCAAAAAATCATAAATAACAAAAATTaaaaaaaaataat                                                   >  2:5089632/1‑123 (MQ=255)
                                                                                ttaCTTATTAAAATTAAAATGGTTTTAATTTGTTTTTTTTTGGTTTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagttt                                                  <  1:5464896/127‑1 (MQ=255)
                                                                                ataCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTTTTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTGATAAACAAAAAGTATTAaaaaaaaataaaaaaaaatatt                                                    >  1:3176297/1‑126 (MQ=255)
                                                                                ataCTTATCAACATTACAACGCTTTCAAAGTGTAGTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAAGTAACATTTGTATCAAACCAAACATTAAAAAAAAAATTAAAAAAATaagttt                                                  >  1:3751080/1‑128 (MQ=255)
                                                                                  aCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTTTTTTTTTTTTTTTTTTTTAAAAATAAAATTAAAATTTTGATCAACAAAAAAAATATAAAAAAAATTAAAAAAAAtattta                                                  >  1:1580541/1‑127 (MQ=255)
                                                                                    ttATAAACATTAAAACTTTTTCAATGTTTTTTTTTTATGTTTGTT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagtttagt                                               <  1:4561526/128‑1 (MQ=255)
                                                                                     tATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAATTAAAATTAATATTTTTTACAAACAAAAAAATATCAATAAAATTAAAAAAAAttttttatttat                                            >  2:3868211/1‑126 (MQ=255)
                                                                                      aTCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAATATTTGAAAAAACCAAAAAAAAATAAAAAAAATAAAAAAAAAaatttttattta                                            >  2:1351548/1‑122 (MQ=255)
                                                                                       tCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTTAAAAACAAAAAATATATAAAAAAAATTTAAAAAAATATTTTAATTTAg                                           >  1:902318/1‑128 (MQ=255)
                                                                                       tCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTGATAAACCAAAAATATTTAAAAAAATTTTAAATAAAatgtttattttatt                                          >  1:3640902/1‑124 (MQ=255)
                                                                                        cAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAATAATATTTGGATAAAACAAAACTATATAAAAAAAATTAAAAAAAAtattttatttttat                                          >  1:581477/1‑124 (MQ=255)
                                                                                           cATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTTTTTTTTTTTTTTTTTTTTTAAAAATAAAATTAAATTTTTATAAACCAAAAAAATAAAAAAAAAATAAAAAAAAAaattttttttttttt                                         >  2:4626127/1‑119 (MQ=255)
                                                                                           aaTTACAACGATTTAAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCa                                      <  2:4190903/127‑1 (MQ=255)
                                                                                             ttACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAAGATTTTGATCAACCAAAACTATATAAAAAAAAATAAAAAAAATAGTTTATTTGTATTTCaa                                     >  1:1006379/1‑128 (MQ=255)
                                                                                              tACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTAGTAAAAAAAAAATAAAGATTTGAATAAACCAAAAATATATAAAAAAATTTAAAAAAAATAATTtagtttagttaaaaa                                    >  1:1438345/1‑123 (MQ=255)
                                                                                                  aCGTTTTAAAAGTGTTTTTTTTAGGCTTT‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGc                               <  2:4923391/128‑1 (MQ=255)
                                                                                                  aCGCTTTCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAAATTAAATTTTGATCAACAAAAAATATATAAAAAAAATTAAAAAAAATATTTTATTTTAGTTTAAAAtatt                                >  1:2956864/1‑125 (MQ=255)
                                                                                                  aCGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAAAATTTTATTTTAGTTTCaaaaatga                               >  1:4283769/1‑123 (MQ=255)
                                                                                                    gattttAAATTGTATTTTTTAGGCTTTT‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCa                              <  2:4285798/126‑1 (MQ=255)
                                                                                                       ttCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAAATTTGGAAACACCCAAACTTTATCAAAAAAATATAAAAAAATAGTTTTATTTTTTTTGAAATGTGCattt                           >  2:349246/1‑126 (MQ=255)
                                                                                                       ttCAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAAATTTTGGATAAACAAAAACTAAAAAAAAAAAATAAAAAAAAAAAGTTTAATTAAATTTaaaaatataaata                           >  2:2936482/1‑119 (MQ=255)
                                                                                                        tCAAAGTGTATTTTTTAGGCTTGTTTTTTTTTTTTTTTTTTTTTAAAAAAAAATATAATATTTTGATAAACAAAAAATTTTAAAAAAAAATTAAAAAAATTTTTTTATTTATGTATAAAATATGCaaa                            >  1:2716965/1‑126 (MQ=255)
                                                                                                         cAAAGTGTATTTTTTAGGCTTGT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTGATCAACAAAAAATATATTAAAAAAATTAAAAAAAATATTTTATTTTAGTTTAAAAAATGAatatat                         >  1:3978639/1‑128 (MQ=255)
                                                                                                            aGTGTATTTTTTAGGCTTGTT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTATGATTTGGATCAACCAAAACAATTTAAAAAAAATTAAAAAAAATTATTTAGTTGAGTTTAAAAACTTAAtatttat                       >  1:4114600/1‑127 (MQ=255)
                                                                                                             gtgtATTTTTTAGGCTTGTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAATTTATATTTGGAAAAACCAAAAATATATAAAAAAAATTAAAAAAAATAATTTATTTTATTTTAAAAtaatcaaatata                        >  1:1353435/1‑117 (MQ=255)
                                                                                                                    ttttAGGCTTGTT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAGATTTGGATAAACCAAAAGTATTTAAAAAAAATTAAAAAAAATATTTATTTTTATTTTAAAATCTGCATATATATTAAAAAgg               >  1:2544524/1‑128 (MQ=255)
                                                                                                                         ggCTTG‑‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGGAAAAACCAAAAATAAATAAAAAAAATTAAAAAAAAAATTTTATTTTTTTTACAAAAATGAATAATTATTAAAAAGTAATTTAt        >  2:4497212/1‑128 (MQ=255)
                                                                                                                          tttttttttttttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGaa             <  1:4827959/117‑1 (MQ=255)
                                                                                                                             ttttttttttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt          <  1:204748/120‑1 (MQ=255)
                                                                                                                             ttgtttttttttttttttttttttGTTAAAATAATATTAAGATTTGGATCAACAAAAACTATATTAAAAAAATTAAAAAAAATTGTTTAGTTTATTTTCAAATCTTCATATATAGTACAAAGGAAttt          <  1:4724828/120‑1 (MQ=255)
                                                                                                                             ttgtttttttttttttttttttttGTTAAAATAAAAGTAAGATTTTGATCAAACAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt          <  2:6473/120‑1 (MQ=255)
                                                                                                                             tgttttttttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt          <  1:5133680/120‑1 (MQ=255)
                                                                                                                               ttttgtttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAt        <  1:4985772/122‑1 (MQ=255)
                                                                                                                               gtttttttttttttttttttttGTAAATATAAAAGTAAGATTTGGATCAACAAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAt        <  2:2836838/122‑1 (MQ=255)
                                                                                                                                tttttttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATg       <  2:1685719/123‑1 (MQ=255)
                                                                                                                                 gtttttttttttttttttttttAAAAAAAAAATTAAGATTTTGAAAAACCAAAAAAATAAAAAAAAAATTAAAAAAAATATTTTTGTTTATTTAAAAAAATGCAAATATATTAAAAAGTAAttattaa      >  2:1805993/5‑123 (MQ=255)
                                                                                                                                  tttttttttttttttttttGTAAATATAAAAGTTAGATTTTGATAAAAAAAATCTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAt     <  2:1191230/125‑1 (MQ=255)
                                                                                                                                  tttttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAt     <  2:5365297/125‑1 (MQ=255)
                                                                                                                                    tttttttttttttttttGTTAAAATATAATTTATTTTTTTATGAACATAAAATATATTAAAAAAATTAAAAAAAATATTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg   <  2:4093433/127‑1 (MQ=255)
                                                                                                                                    tttttttttttttttttGTAAAAATAAAAGTAATATTTTGATCAAAAAAAAATATATAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg   <  1:2257650/127‑1 (MQ=255)
                                                                                                                                     ttttttttttttttttttAAAAATAAAATTAATATTTGGATCAACCAAAAAAATATAAAAAAAATTAAAAAAAATATTTTATTTGATTTTAAAATAAGAATATTTATTAAAAAAAAATTTTTtataaa  >  2:4851124/1‑126 (MQ=255)
                                                                                                                                     |                                                                                                                                   
TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA  >  CP016816/203769‑204023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.