New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP016816 | = 203895 | 576 (0.260) | 331 (0.130) +TTT |
96/214 | 17.8 | 34.4% | intergenic (+279/+179) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase |
? | CP016816 | 203896 = | 633 (0.250) | intergenic (+280/+178) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase | |||||
Rejected: Coverage evenness skew score above cutoff. |
Only 100 of 1042 total aligned reads displayed.
TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA > CP016816/203769‑204023 | ttAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTTTACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑t > 2:4981730/1‑128 (MQ=255) tAATTTTTTTTATAAAAAAAAATAAAAATTTTTAATTTAAATCAATTTTTAAAAAATTTTATTTTTTTTGTTTTTTTTTTTAATTTTAAAAATTTAAAATCTTTTAAATTGTTTTTTTTTTGC‑T‑tt‑‑‑‑tt < 2:822003/128‑1 (MQ=255) aatttttttATAAAAAAAAAAAAAAATTTTTAATTTAAATTCTTTTTTAAAAAATCCTTTTTTTTTTGTTTTTTTTTATAATTATAAAAATTAAAACGCTTTAAAATTGTTTTTTTTTGGG‑T‑tt‑‑‑‑tttt < 2:374784/126‑1 (MQ=255) ttttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttt > 1:4504725/1‑128 (MQ=255) ttttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCAATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑AG‑‑‑‑ttttttt > 2:1062159/1‑128 (MQ=255) tatttATAAAAAAAAAAAAAATTTTTTAATTAAAAGCCATTTCTAAAAAACCCTAGGTTCTAGGCTTTTTATTAATATTATCAAAATTACACCGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑tttttttt < 2:2287721/126‑1 (MQ=255) ttttATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACACTTTCAAAGTGTATTTTTTAGTC‑T‑TG‑‑‑‑ttttttttt > 1:4360014/1‑128 (MQ=255) ttataaaaaaaaaaTAAAAATTTTTAATTAAAAGCACTTTGTAAAAATCCCTATTTTAAATGATTTTTATTAAAATTTTCAAAATTACAACGCTTTAAAATTTTTTTTTTTTGGC‑T‑TG‑‑‑‑tttttttttt < 2:1927751/123‑1 (MQ=255) tataAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATGACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑tttttttttat‑t > 2:3570606/1‑128 (MQ=255) taAAAAAAAATAAAAATTTTTAATTTAAACCCCTATTTAAAAAATCCTATGTTCTAGGCTTTTTATTATAATTATCAACATTACAACGCTTTCAAATTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttttttt‑tt‑t < 1:5279683/128‑1 (MQ=255) aaaaaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATTCTTATCAACAGTACAAAGCTTTCAAAGTGTATTTATTAGGC‑t‑tg‑‑‑‑ttttttttgtt‑tt‑tt > 1:821649/1‑128 (MQ=255) aaaaaaaaaTAAAAATTTTTAATTTAAATCCATTTTTAAAAAACCATATTTTCTAGGCTTTTTATTATACTTATCAAAAATACAACGCTTTTAAATTTTATTTTTTATGG‑T‑TG‑‑‑‑ttttttttttt‑tt‑tt < 2:4369423/128‑1 (MQ=255) aaaaaaaaaaaaaaTTTTTTATTTAAATCCATTTTTAAAAAATCCAATGTTGAATTCTTTTTATTTTAATTATAAAAATTAAAACGCTTTAAAAGTTTATTTTTTTGGG‑T‑tt‑‑‑‑ttttttttttt‑tt‑ttt < 2:4705139/128‑1 (MQ=255) aaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑tttttttattt‑tt‑ttttt > 2:2639004/1‑126 (MQ=255) aaaaaaTAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑ctttttttttt‑tt‑ttttt > 1:4436819/1‑126 (MQ=255) aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttttttt‑tt‑tttttt > 2:1448121/1‑125 (MQ=255) aaaaataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttttttt‑tt‑ttttgt > 1:3072583/1‑125 (MQ=255) aaataaaaatTTTTTTTTTAATTCAATTTGTAAAAAATCCTATTTTTTAGGTTTTTTTTTATACTTATAAAATTTACAACGCTTTAAAATTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttttttt‑tt‑ttttgtaa < 2:246134/128‑6 (MQ=255) aaataaaaatTTTTAAATTAAACACATTTTTAAAAAACCATTTTTTTTTTGCTTTTTATTTTAATTATCAAAATTACAACGCTTTAAAATTGTATTTTTTAGGC‑T‑tt‑‑‑‑ttttttttttt‑tt‑ttttgtaa < 1:3325789/128‑6 (MQ=255) aataaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑aaaa > 1:3413739/1‑128 (MQ=255) aaaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttttttt‑tt‑tttttttaaaat > 1:4145683/1‑119 (MQ=255) aaaatTTTTTATTTAAATCCATTTGTAAAAAATCCTATGTTTAATGCTTTTTATTATAATTATAAACATTACAACGCTTTCAAATTTTTTTTTTTTGGCTT‑TT‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATa < 2:3141403/128‑1 (MQ=255) aaaatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTAAAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑ttttttttttt‑tt‑ttttttataaata > 2:5289991/1‑118 (MQ=255) aaaatTTTTAATTTTAATACATTTGTAAAAAATTCTATTTTTTAGTGTTTTTATTTTAATTATAAACAATACAACGCTTTAAAAGTGTTTTTTTTTTGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATa < 2:559969/128‑1 (MQ=255) aaaatTTTTAAATTTAACCCATTTGATAAAAAGCATATTTTCTAGGGTTTTTATTATTATTATAAACAATACAACGCTTTTAAAGTGTTTTTTTTTGGC‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAAt < 1:4901671/128‑1 (MQ=255) aatTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATaaa > 1:4218469/1‑128 (MQ=255) tttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑‑T‑AAAAAAAAAATTa > 1:1674811/1‑128 (MQ=255) ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑TAAAATtaaaatt > 2:4779911/1‑125 (MQ=255) ttttCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TA‑AAAAATAAAAGTa > 1:1109290/1‑128 (MQ=255) ttttATTTAAATAAATTTGTAAAAAATGTTATGTTCTATTCTTTTTATTATACTTATAAACATAACAACTCTTTCAAATTGTATTTTTTATGCTT‑TT‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTa < 1:2647773/128‑1 (MQ=255) tttCATTTATATCCATTTTTAAAAAAGCGTTTGTTCTAGTGTTTTTATTTTACTTTTCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTa < 1:5040340/128‑1 (MQ=255) attaaTTTAAATCCATTTGTAAAAAAGCCTATGTTCTAGTCTTTTTATTATAATTATCAACATTACAACGCTTTAAAATTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTa < 1:658037/124‑1 (MQ=255) taTTTAAATCCATTTTTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGAt < 2:4427142/127‑1 (MQ=255) aTTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑‑T‑TATAATAAATGTAAAAttt > 2:1589612/1‑128 (MQ=255) tttAAATACATTTTTAAAAAATCATATTTTTTATTTTTTTTATTATAATTATAAAAATTAAAAAGCTTTCAAATTTTATTTTTTTGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGAtt < 1:5186771/128‑1 (MQ=255) ttAAATTCATTTTTAAAAAATTATATTTTTTATTATTTTTATTATAATTATCAAAATTAAAAAGATTTAAAAGTTTTTTTTTTAGGC‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGAtt < 1:1785063/128‑1 (MQ=255) tAAATCCATATTTAAAAAATCCTATGTTCTATGTTTTTTATTATACTTATAAAAATTACAACGCTTTCAAAGTGTATTTTTTTGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTg < 2:4537869/128‑1 (MQ=255) tAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAATTTATATTTgg > 1:1883312/1‑128 (MQ=255) aaGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAATTAATATTTTGAt > 1:2861709/1‑128 (MQ=255) acATTTTTTAAAAATCATATTTTTAATGTTTTTTATTAAAATTATAAAAATTTAAACCCTTTAAAATTTTTTTTTTTTTGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCa < 2:522292/127‑1 (MQ=255) aTTTTTTAAAAACCATATTTTTTATGTTTTTTTTTTTTATTATAAACTTTAAAACGTTTTTAAATGTTTTTTTTTTTGA‑T‑TT‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAAcc < 1:1294563/128‑1 (MQ=255) tttAAAAAAGCCTATTTTATTTGTTTTTTATTATACTTATAAACATTAAAATTCTTTCAAATTGTTTTTTTTTGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCaaa < 2:2713973/126‑1 (MQ=255) gTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑‑TTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGGAAGATTTGGTTCAACCaaata > 1:1190257/1‑126 (MQ=255) aaaaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAATATTTGGAACAAACaaaa > 2:2005389/1‑128 (MQ=255) aaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAATTAAAAGTAAGATTTGGAAAAAACaaaaaat > 1:5225661/1‑125 (MQ=255) aaGCCTATGTTTTAGGCTTTTTTTTATAATTATAAAAATTACAACGCTTTAAAATTTTATTTTTTAGGT‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACtata < 2:5447827/128‑1 (MQ=255) gCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAATAAGATTTTGATAAACCaaaaatttttc > 1:353167/1‑121 (MQ=255) atttttttagttttttttttATAATTATAAACATTAAAAAGTTTTTAAATTGTATTTTTTTGGG‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCaaa < 2:3393109/116‑1 (MQ=255) tGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAAATTTTTGAAAAAACAAAAATATATAaaaaaa > 1:5332028/1‑128 (MQ=255) ttCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGTTT‑TTTTTTTTTTT‑TT‑TTT‑TT‑TTAAATAAAAGTAATATTTGGAACAACAAAAAATATAACaaaaa > 1:5406323/1‑128 (MQ=255) ttCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AATAATAAAATTAATATTTTGAATAAACAAAAATATATCaaaaaa > 2:1296390/1‑128 (MQ=255) acatAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAAGATTTGGTTCAACCAAAACTATataaaataaa > 1:4634988/4‑128 (MQ=255) tCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAAGATTTGTATCAACAAAAAatattaaaaataaat > 1:3873994/1‑117 (MQ=255) atAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TTATTT‑TT‑AAAAAAAAAATATATATTTTGATAAAAAAAAAAATTATAAAAAAAAtt > 1:4042672/2‑128 (MQ=255) tAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAAGTAATATTTGGATAAACAAAAAGTAATTAAAAAAAATTaa > 1:2434320/1‑128 (MQ=255) tttattatttttatAATTATCATAATTACTAAGTTTTATAATTTTATTTTTTTGGT‑T‑TG‑‑‑‑‑TTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaaa < 2:2158208/118‑1 (MQ=255) aGGATTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGTC‑TATT‑‑‑‑ATTTTTTATTT‑TT‑TTT‑AT‑AAAAATAAAATTAAAAATTGTAAAAACAAAAACTAAATAAAAAAAATaaa > 1:2393571/1‑128 (MQ=255) ggCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAAAAATTGGAAAAACaaaaaaattaaaaaaaaaattaaa > 1:754177/1‑128 (MQ=255) ttattaAACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TTAAAAAATAAAATTAAGATTTTGAAAAACTAAAAATATATAAAAAAATATaaaaaaaaa > 1:5532058/1‑127 (MQ=255) ttatACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTTATT‑TTT‑TT‑AAAAAAAAAAATAA‑ATATGTATCAAAAAATCATAAATAACAAAAATTaaaaaaaaataat > 2:5089632/1‑123 (MQ=255) ttaCTTATTAAAATTAAAATGGTTTTAATTTGTTTTTTTTTGGT‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagttt < 1:5464896/127‑1 (MQ=255) ataCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGTTT‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAATATTTTGATAAACAAAAAGTATTAaaaaaaaataaaaaaaaatatt > 1:3176297/1‑126 (MQ=255) ataCTTATCAACATTACAACGCTTTCAAAGTGTAGTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAAGTAACATTTGTATCAAACCAAACATTAAAAAAAAAATTAAAAAAATaagttt > 1:3751080/1‑128 (MQ=255) aCTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGTTT‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAAAATTTTGATCAACAAAAAAAATATAAAAAAAATTAAAAAAAAtattta > 1:1580541/1‑127 (MQ=255) ttATAAACATTAAAACTTTTTCAATGTTTTTTTTTTATGT‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagtttagt < 1:4561526/128‑1 (MQ=255) tATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAATTAAAATTAATATTTTTTACAAACAAAAAAATATCAATAAAATTAAAAAAAAttttttatttat > 2:3868211/1‑126 (MQ=255) aTCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAAAAAATATTTGAAAAAACCAAAAAAAAATAAAAAAAATAAAAAAAAAaatttttattta > 2:1351548/1‑122 (MQ=255) tCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAATATTTTTAAAAACAAAAAATATATAAAAAAAATTTAAAAAAATATTTTAATTTAg > 1:902318/1‑128 (MQ=255) tCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAATATTTTGATAAACCAAAAATATTTAAAAAAATTTTAAATAAAatgtttattttatt > 1:3640902/1‑124 (MQ=255) cAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAAATAATATTTGGATAAAACAAAACTATATAAAAAAAATTAAAAAAAAtattttatttttat > 1:581477/1‑124 (MQ=255) cATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGTTTTTTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAA‑ATTTTTATAAACCAAAAAAATAAAAAAAAAATAAAAAAAAAaattttttttttttt > 2:4626127/1‑119 (MQ=255) aaTTACAACGATTTAAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCa < 2:4190903/127‑1 (MQ=255) ttACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAATTAAGATTTTGATCAACCAAAACTATATAAAAAAAAATAAAAAAAATAGTTTATTTGTATTTCaa > 1:1006379/1‑128 (MQ=255) tACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTTAGT‑AAAAAAAAAATAAAGATTTGAATAAACCAAAAATATATAAAAAAATTTAAAAAAAATAATTtagtttagttaaaaa > 1:1438345/1‑123 (MQ=255) aCGTTTTAAAAGTGTTTTTTTTAGGC‑T‑TT‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGc < 2:4923391/128‑1 (MQ=255) aCGCTTTCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAAATTAAATTTTGATCAACAAAAAATATATAAAAAAAATTAAAAAAAATATTTTATTTTAGTTTAAAAtatt > 1:2956864/1‑125 (MQ=255) aCGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAATTAATATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAAAATTTTATTTTAGTTTCaaaaatga > 1:4283769/1‑123 (MQ=255) gattttAAATTGTATTTTTTAGGCTT‑TT‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCa < 2:4285798/126‑1 (MQ=255) ttCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAAAATTTGGAAACACCCAAACTTTATCAAAAAAATATAAAAAAATAGTTTTATTTTTTTTGAAATGTGCattt > 2:349246/1‑126 (MQ=255) ttCAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAATTAAATTTTGGATAAACAAAAACTAAAAAAAAAAAATAAAAAAAAAAAGTTTAATTAAATTTaaaaatataaata > 2:2936482/1‑119 (MQ=255) tCAAAGTGTATTTTTTAGGC‑T‑TGTTT‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAATATAATATTTTGATAAACAAAAAATTTTAAAAAAAAATTAAAAAAATTTTTTTATTTATGTATAAAATATGCaaa > 1:2716965/1‑126 (MQ=255) cAAAGTGTATTTTTTAGGC‑T‑TGT‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAATATTTTGATCAACAAAAAATATATTAAAAAAATTAAAAAAAATATTTTATTTTAGTTTAAAAAATGAatatat > 1:3978639/1‑128 (MQ=255) aGTGTATTTTTTAGGC‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAATTATGATTTGGATCAACCAAAACAATTTAAAAAAAATTAAAAAAAATTATTTAGTTGAGTTTAAAAACTTAAtatttat > 1:4114600/1‑127 (MQ=255) gtgtATTTTTTAGGC‑T‑TGTTTTTTTTTTTTTTT‑TT‑TTT‑TT‑AAAAAAAAAATTTATATTTGGAAAAACCAAAAATATATAAAAAAAATTAAAAAAAATAATTTATTTTATTTTAAAAtaatcaaatata > 1:1353435/1‑117 (MQ=255) ttttAGGC‑T‑TGTT‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAAGTAAGATTTGGATAAACCAAAAGTATTTAAAAAAAATTAAAAAAAATATTTATTTTTATTTTAAAATCTGCATATATATTAAAAAgg > 1:2544524/1‑128 (MQ=255) ggC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑TT‑AAAAATAAAATTAATATTTGGAAAAACCAAAAATAAATAAAAAAAATTAAAAAAAAAATTTTATTTTTTTTACAAAAATGAATAATTATTAAAAAGTAATTTAt > 2:4497212/1‑128 (MQ=255) tttttttttttttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGaa < 1:4827959/117‑1 (MQ=255) ttttttttttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt < 1:204748/120‑1 (MQ=255) ttgtttttttttttttttt‑tt‑ttt‑GT‑TAAAATAATATTAAGATTTGGATCAACAAAAACTATATTAAAAAAATTAAAAAAAATTGTTTAGTTTATTTTCAAATCTTCATATATAGTACAAAGGAAttt < 1:4724828/120‑1 (MQ=255) ttgtttttttttttttttt‑tt‑ttt‑GT‑TAAAATAAAAGTAAGATTTTGATCAAACAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt < 2:6473/120‑1 (MQ=255) tgttttttttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt < 1:5133680/120‑1 (MQ=255) ttttgtttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAt < 1:4985772/122‑1 (MQ=255) gtttttttttttttttt‑tt‑ttt‑GT‑AAATATAAAAGTAAGATTTGGATCAACAAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAt < 2:2836838/122‑1 (MQ=255) tttttttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATg < 2:1685719/123‑1 (MQ=255) gtttttttttttttt‑tt‑ttt‑tt‑AAAAAAAAAATTAAGATTTTGAAAAACCAAAAAAATAAAAAAAAAATTAAAAAAAATATTTTTGTTTATTTAAAAAAATGCAAATATATTAAAAAGTAAttattaa > 2:1805993/5‑123 (MQ=255) tttttttttttttt‑tt‑ttt‑GT‑AAATATAAAAGTTAGATTTTGATAAAAAAAATCTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAt < 2:1191230/125‑1 (MQ=255) tttttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAt < 2:5365297/125‑1 (MQ=255) tttttttttttt‑tt‑ttt‑GT‑TAAAATATAATTTATTTTTTTATGAACATAAAATATATTAAAAAAATTAAAAAAAATATTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg < 2:4093433/127‑1 (MQ=255) tttttttttttt‑tt‑ttt‑GT‑AAAAATAAAAGTAATATTTTGATCAAAAAAAAATATATAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg < 1:2257650/127‑1 (MQ=255) ttttttttttt‑tt‑ttt‑tt‑AAAAATAAAATTAATATTTGGATCAACCAAAAAAATATAAAAAAAATTAAAAAAAATATTTTATTTGATTTTAAAATAAGAATATTTATTAAAAAAAAATTTTTtataaa > 2:4851124/1‑126 (MQ=255) | TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGC‑T‑TG‑‑‑‑TTTTTTTTTTT‑TT‑TTT‑GT‑AAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGA > CP016816/203769‑204023 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |