BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 437880	748 (0.380)	572 (0.230) +ATAT	104/188	13.5	36.7%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	437881 =	1076 (0.420)	572 (0.230) +ATAT	104/188	13.5	36.7%	intergenic (‑185/+237)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1696 total aligned reads displayed.

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑a                                                                                                                                 >  2:219706/1‑128 (MQ=255)

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑a                                                                                                                                 >  1:4148869/1‑128 (MQ=255)

 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACATCCATATTAACTATAGATTTAAT‑‑‑‑‑‑G‑‑‑‑at                                                                                                                                >  1:2235203/1‑128 (MQ=255)

 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑at                                                                                                                                >  2:3470718/1‑128 (MQ=255)

 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑at                                                                                                                                >  2:700319/1‑128 (MQ=255)

      tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatata                                                                                                                           >  2:3910256/1‑128 (MQ=255)

       aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatat                                                                                                                          >  1:3121857/1‑128 (MQ=255)

         ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatat                                                                                                                        >  2:5356419/1‑128 (MQ=255)

         ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatat                                                                                                                        <  2:1538814/128‑1 (MQ=255)

          tttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCTAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatata                                                                                                                       >  1:1638795/1‑128 (MQ=255)

          tttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatata                                                                                                                       >  1:1370663/1‑128 (MQ=255)

           ctacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatat                                                                                                                      >  2:2979204/10‑128 (MQ=255)

            tacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAC‑‑‑‑‑‑G‑‑‑‑atatatatatata                                                                                                                     >  2:105534/9‑128 (MQ=255)

             gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatat                                                                                                                    <  2:2870294/128‑1 (MQ=255)

             gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatat                                                                                                                    <  1:3569173/128‑1 (MQ=255)

               aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatat                                                                                                                  <  1:4808761/128‑1 (MQ=255)

               aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatat                                                                                                                  >  1:2479225/1‑128 (MQ=255)

                gTTTTAAGTTAAATTTTTAATAAATATTAGAAATAAAAAATGTATTTTTAAAATAAATAATTTAGGAAATGAAGAAAAGAAAAAACCTCCATATTACCAATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatata                                                                                                                 <  1:1462550/128‑1 (MQ=255)

                gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatata                                                                                                                 >  2:4030137/1‑128 (MQ=255)

                 ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatat                                                                                                                >  1:1084964/1‑128 (MQ=255)

                  tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATAAAATAAAAAACCTCCATATTAAATATAGAGATAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatata                                                                                                               <  1:768697/128‑1 (MQ=255)

                   tttaGTTTCATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAAGCAAATAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatat                                                                                                              <  1:2989242/125‑1 (MQ=255)

                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatat                                                                                                              >  2:5136501/1‑128 (MQ=255)

                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatat                                                                                                              >  1:4515493/1‑128 (MQ=255)

                     aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                            >  1:2634697/1‑128 (MQ=255)

                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                           <  1:2035602/128‑1 (MQ=255)

                       gTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                          <  1:1548939/128‑1 (MQ=255)

                        tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatattca                                                                                                         >  2:1954623/1‑125 (MQ=255)

                        tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatata                                                                                                         >  1:2772553/1‑128 (MQ=255)

                         ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                        <  2:4999145/128‑1 (MQ=255)

                          tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatata                                                                                                       >  1:2894759/1‑128 (MQ=255)

                           aaTTTTTAATAAATATTATATAAATAAATTGTATTTTTATAATAAATATTTTTTTATATTTATAAAATAAAAAACCTACATATTTCATATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                      <  1:1951063/127‑1 (MQ=255)

                            aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatgcaag                                                                                                     >  1:3403563/1‑123 (MQ=255)

                              ttttATTAAATATAATATATAAAAATAGTATTTTTAAAATAAATATATTAGGAAATGAAGCCAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCa                                                                                                   <  2:4515639/128‑1 (MQ=255)

                              ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatgtatgcaag                                                                                                   <  1:3220728/128‑6 (MQ=255)

                              ttttAATAAATATTAGAAATAAAAAATTTATTTTTAAAATAAATATTTTAGGAAATCAAGCAAATCAAAAAAATCCATATTACATATAGAGTTATT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatgcaag                                                                                                   <  2:4133247/128‑6 (MQ=255)

                               tttAATATATATTAGATATAAAAATTGTATTTTTAAAATATATATTTTATGAAATTAAGCAAATAAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatcattaact                                                                                                  <  2:883495/128‑9 (MQ=37)

                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatattaaa                                                                                                  >  2:492930/1‑124 (MQ=255)

                                  tatatataatttaaaTAAAAATTTTTTTTTTAAAATAAATATTTTATTTTATATATATAATAAAAAAAATCTATATAATATATATAGTTAAT‑‑‑‑‑‑T‑‑‑‑TTATATATATATATATATATATATATATGCAAGCg                                                                                               <  2:5441527/116‑1 (MQ=255)

                                  ataaaataTTATATATAAAAATTGTTTTTTTAATATAAATATTTTATTAAATTAATCTAATCAAAAAAAACTATATTTAATATAGAGATAAT‑‑‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatatatatatc                                                                                               <  2:5243815/125‑8 (MQ=255)

                                       atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAATTGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCTATAAg                                                                                          >  1:646644/1‑128 (MQ=255)

                                       atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCa                                                                                        >  1:2137138/1‑128 (MQ=255)

                                        tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑GTATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                     >  2:27054/1‑128 (MQ=255)

                                         atTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGAGAtcatca                                                                                        >  2:1340858/1‑128 (MQ=255)

                                           tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGAGATAAGCATa                                                                                      >  1:4998590/1‑128 (MQ=255)

                                                   aaaaTTGTATTTTTAAAATAAATATTTTATTAAATTAAGCAAAGAAAAAACCTCCATAATACCTATAGAGTTAAT‑‑‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATgg                                                                                <  1:3854374/128‑1 (MQ=255)

                                                   aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCATCAT‑ATATGGTGaaa                                                                           >  1:2556227/1‑128 (MQ=255)

                                                   aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGAAATAGATCATAATAAAATTGTGaa                                                                            >  2:189453/1‑128 (MQ=255)

                                                    aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCTGCATAAAATGgaga                                                                             >  1:2412394/1‑128 (MQ=255)

                                                       ttttATTTTTTAAATAAATATTTTATTAAATTAATCTAAGCAAAAAACTCTATATTAACTATAGAGATAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                          <  2:2293873/125‑1 (MQ=255)

                                                       ttGTTTTTTTAAAATAAATATTATATTAATTTAATAAAAGAAAAAATCTAAATATTATCTATAGATTTATTTA‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGaa                                                                            <  1:4897846/128‑1 (MQ=255)

                                                          tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCCATAGAGTTAAT‑‑‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGAAAGATATCACAATAAAATTGTGAAAtt                                                                         >  2:1243937/1‑128 (MQ=255)

                                                           aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATAAATGCAAGATAACATAATAAAATGGTTATATTTAg                                                                      >  1:3756038/1‑128 (MQ=255)

                                                           aTTTTTAAAATAAATATTTTAGCAATATATGCAAAGAAAAAACATCAATATTATCTATATAGTTAAT‑‑‑‑‑‑T‑‑‑‑ATATATATAAATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAg                                                                      <  2:1743793/128‑1 (MQ=255)

                                                            tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATAAATGCAAGCGATCAGCTTAATATGGTGATATTTAGa                                                                     >  1:4064287/1‑128 (MQ=255)

                                                            tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                 <  2:206904/128‑1 (MQ=255)

                                                             ttttAAAATATATATTTTAGTAAATTAAGCATATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATGTATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                  <  1:3500234/128‑1 (MQ=255)

                                                              tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATATAATGTTGAAAATTATATc                                                                   >  2:113022/1‑128 (MQ=255)

                                                                 aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCTATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                >  2:3211502/1‑128 (MQ=255)

                                                                  aaatatatATTTTATGAAATGAAGAATATCAAAAACATCCATATTAACTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               <  1:876547/128‑1 (MQ=255)

                                                                  aaataaatATTTTATGAAATTAAGATAAGCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  2:3093414/128‑1 (MQ=255)

                                                                  aaataaatATTTTATCAAAATAAGAAAAGAAAAAACCACAATATTAAATATAGAGATAATTATATAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGa                                                                     <  2:1421086/128‑1 (MQ=255)

                                                                      aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                       <  1:1789364/128‑1 (MQ=255)

                                                                         tatTTTAGGAAATGAAGCAAAGCAAAAACCTCTATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                    <  2:3403563/128‑1 (MQ=255)

                                                                         tatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                <  1:4590817/128‑1 (MQ=255)

                                                                             ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCTAGCGATCAGAATAAAATGGTGAAATATAGATATGAGTTTATCTTa                                                      >  1:4702247/1‑128 (MQ=255)

                                                                             ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGATATCAAAATAAAATTGTTATATTTAGATGAGATTTTGTATTaat                                                    >  2:3304542/1‑127 (MQ=255)

                                                                               agtaaaTGAAGAAAAGAAAAAACCTCAATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                              <  1:5109972/125‑1 (MQ=255)

                                                                                ggAAATGAAGCAAAGAAAAAACCTCAATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                               <  1:4286398/128‑1 (MQ=255)

                                                                                 ttaaagaataaaagaaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAtt                                                  <  2:4426346/118‑1 (MQ=255)

                                                                                   aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGAGAAATTTAGATCTGAGATGCTCTAAAATTAGTa                                              >  2:1636896/1‑128 (MQ=255)

                                                                                     tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGAGATCATCAAAAAATGGAGAATTATATATATGAGTAAGTTATATATTTATAGt                                            >  1:232936/1‑128 (MQ=255)

                                                                                     tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATCCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTAATATTTGTAGtgt                                          >  2:4586003/1‑126 (MQ=255)

                                                                                      gAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt                                           <  2:4226855/128‑1 (MQ=255)

                                                                                        agcaaagcaaAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATTGTGAAATATATATCTGAGTTTGTCTTATATTTTTAGtt                                           >  1:1260193/1‑128 (MQ=255)

                                                                                            aagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATTCAAGCGATCAGCATAAAATGGTGAAATTTAGATATGAGTTGGTATTAAATTTGTAGTTttta                                       >  1:3311940/1‑128 (MQ=255)

                                                                                                aaaaaCCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                     >  2:432525/1‑124 (MQ=255)

                                                                                                aaaaaCCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTtata                                 >  1:3909124/1‑128 (MQ=255)

                                                                                                 cttccgatcttatTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                <  1:1013660/118‑1 (MQ=255)

                                                                                                 aaaaCATCCATATTAACTATAGAGTTAAT‑‑‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                <  2:2622340/128‑1 (MQ=255)

                                                                                                   aaCGTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                          <  2:4805806/128‑1 (MQ=255)

                                                                                                   aaCCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAttt                              >  1:1875757/1‑128 (MQ=255)

                                                                                                    aCCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATATAg                       >  1:5369644/1‑128 (MQ=255)

                                                                                                        ccATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATACACGCGCACCGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTAGTTTTTTTTTATAGtatatat                         >  2:3785355/1‑127 (MQ=255)

                                                                                                           tatTACCTATAGAGTTAAT‑‑‑‑‑‑GATATATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTATAGTTTTTATTTATAGTTtata                          >  2:2417569/1‑128 (MQ=255)

                                                                                                             ttACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTATAGGTATCAGAATAAAATTGTTATATTTAGATATGAGTTGGTGTTAATTTTGTATTTGTTATTTATAGTTtatatatttt                    >  2:3513763/1‑122 (MQ=255)

                                                                                                              tACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                   >  1:1164100/1‑128 (MQ=255)

                                                                                                              tACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                 <  1:5222401/128‑1 (MQ=255)

                                                                                                              tACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTAGGTCTTAAATTTTTATTTTTTATTTATAGATTATATATttatta                 >  2:77623/1‑128 (MQ=255)

                                                                                                                ccTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATATTTTATAAAGTtaata                 >  1:562767/1‑128 (MQ=255)

                                                                                                                   ataGAGTTAAT‑‑‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  1:4431227/128‑1 (MQ=255)

                                                                                                                    taGAGTTATT‑‑‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt             <  1:434734/128‑1 (MQ=255)

                                                                                                                    taGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAAttt             >  2:4697891/1‑128 (MQ=255)

                                                                                                                     agagTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATATATATATTATAAAGTTAATAATTTa            >  2:560279/1‑128 (MQ=255)

                                                                                                                       agTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATTTATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCCGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa          <  1:3672957/128‑1 (MQ=255)

                                                                                                                       agTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa          <  2:3685158/128‑1 (MQ=255)

                                                                                                                           aaT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGTTCTTAAATTTTTAGTTTTTATTTATATTTTATAAATTTAATAATTTATAtttt      >  2:2537233/1‑128 (MQ=255)

                                                                                                                                 ttaatgatatatatatatatatatatatatatatatGCAAGAGATCAGGATAAAATGGAGAAATATATATATGAGTTTGTCTTAAATTTATTTTTTTTTTTTATATTTTATAAATTTAATAATTTAGa          >  1:5434068/9‑128 (MQ=21)

                                                                                                                                   aatgatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGTGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAAGTTAATAATTTAGAtt        >  1:1715815/7‑128 (MQ=39)

                                                                                                                                      tatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTTAAATTTAGATCAGAGTTTGTAATATATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAATATATAtttta     >  2:2773973/4‑127 (MQ=255)

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.