New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 165267923 (0.500)540 (0.290) 80/248 27.5 37.2% intergenic (+231/‑311) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 165271 = 905 (0.490)intergenic (+235/‑307) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1390 total aligned reads displayed.

TAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAA  >  CP016816/165140‑165394
                                                                                                                                |                                                                                                                                
      ttttaatttttattaattattaatTAAATAAAAATATTTTATTTTTTTATATTTTTTTTTTTTTAAAATTTTTAAAAAATTAATTTTAAATTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTATAATg                                                                                                                           <  2:580155/118‑1 (MQ=255)
       tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTatatttta                                                                                                                           >  2:1419152/1‑124 (MQ=255)
        cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatgtaa                                                                                                                          >  2:3958527/1‑122 (MQ=255)
          cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttttttttaaatgtaaat                                                                                                                        >  2:1765067/1‑118 (MQ=255)
             ttGTATGAATTAGCAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatttaaataaa                                                                                                                     >  1:454429/1‑117 (MQ=255)
                tATTAATTATTTAGAAAATTAAAATTTTATATTTTTTTATTTTTTTTTTATATGTAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                               <  2:874177/128‑1 (MQ=255)
                   gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTATTTTATAATAGAATTATAAAtttt                                                                                                             >  2:3567009/1‑128 (MQ=255)
                   gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTa                                                                                                            >  1:737509/1‑128 (MQ=255)
                    aaTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTTTAAATATAAATTTTa                                                                                                            >  1:3943074/1‑128 (MQ=255)
                     attttttataaaataaaaataTTATTTTTTTATTTTTTTTTTTTTTATTTAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAAT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                                           <  2:666043/119‑1 (MQ=255)
                      ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTAAgt                                                                                                          >  1:3229730/1‑127 (MQ=255)
                       ttgttataaaataaaaattTTTTTTTTTTTTATTTTTTTTGTATATTCAAATTTTTAAAAAATTAAATTGAAATTGTTAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                                         <  2:712878/121‑1 (MQ=255)
                       tatttataaaataaaaattTTAAGTTTTTTTATTTTTTTTGTTATTGCAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATA‑‑TCGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                                         <  1:2677324/121‑1 (MQ=255)
                       tatttactaaataaaaataTTTTTTTTTTATTTTATTTTTTTTTATTTAAATTTTTTAAAAATTAATTTTTAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                                         <  2:1266696/117‑1 (MQ=255)
                       tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTAAAATAAAAATTTTAgta                                                                                                         >  1:3155713/1‑126 (MQ=255)
                        aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAATGTAAATATAAATTTTattt                                                                                                         >  1:3820550/1‑125 (MQ=255)
                         tttattaaataaaaaaaTTATTTTTTTTTATATTTTTTTTTTTATCAAATTTTTTAAAAATTAATTTTTAATTTTAAAAAAAA‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                                       <  1:1821486/119‑1 (MQ=255)
                          taataaAATAAAAATATTTTTTTTTTATTTTTTTTTTGTAATTTTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATAG‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAtt                                                                                                      <  1:3576810/128‑1 (MQ=255)
                             gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTATTTATAATGGAAATATAAATTTTAGGTATTttg                                                                                                   >  2:3203490/1‑128 (MQ=255)
                               aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAAATTAAAATATAAATTTTATTTAttttt                                                                                                   >  1:2924893/1‑127 (MQ=255)
                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATTTAAATAAAAAtttttttttttttttt                                                                                                 >  2:1038576/1‑116 (MQ=255)
                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATTAAAATTTTattattttttttg                                                                                                >  1:1995204/1‑116 (MQ=255)
                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTtatttattatttttt                                                                                               >  1:674538/1‑121 (MQ=255)
                                 ctaaaactaTTATCTTTTTATATATTTTTTGTATATTCAAATTTTTTAAAAATTAATTTTAACTTGTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTtgttgt                                                                                               <  1:3419670/128‑1 (MQ=255)
                                 ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATttttttttat                                                                                             >  1:37010/1‑124 (MQ=255)
                                 ataaaaattTTATATTTTTTTATTTTTTTTTTATATTAAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgtt                                                                                                 <  2:1854155/127‑1 (MQ=255)
                                    aaattaTTATATTTTTAGTTATTTTTTTTTAATTGAAATTTTTAAAAAATTAAATTGAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                                           <  1:1206521/128‑1 (MQ=255)
                                     aaatattatTTTTTTATATATTTTTTTTTTAATTAAATTTTTAAATAATTAATTTTTAATTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                                           <  1:1514400/125‑1 (MQ=255)
                                      aatattatTTTTTTATTTATTTTTTTTATATTAAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAg                                                                                         <  1:812554/126‑1 (MQ=255)
                                       ctaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAATTGTAAATATAAATTTTTTGTTTTTTTTTTTATaa                                                                                          >  2:191171/1‑128 (MQ=255)
                                        ttttatCTTTTTATATATTTTTTGTATATTAAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTa                                                                                       <  1:3636885/126‑1 (MQ=255)
                                        tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAATGAAAATAAATTTTTTATTTATttttttttaaaatt                                                                                         >  2:2130982/1‑120 (MQ=255)
                                        tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                                      <  1:3011072/128‑1 (MQ=255)
                                          ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTTAAAATATAAATTTTATTTATttttttttaaatttata                                                                                      >  1:1394013/1‑117 (MQ=255)
                                           tatCTTTTTTTTTATTTTTTTTATATTATAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCt                                                                                    <  1:1145793/128‑1 (MQ=255)
                                              cTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTAGTTATTTTTTTTTATaatttaataaa                                                                                 >  1:2101125/1‑119 (MQ=255)
                                               tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTTTGTCTAAGTATATaaaaaa                                                                              >  2:3473156/1‑128 (MQ=255)
                                                ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTATGTTTTTTTTTGTCTAAGTATaaaaaaaa                                                                              >  2:3809658/1‑128 (MQ=255)
                                                 tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATGTAAATATAAATTTTATTTTTTTTTTTTTATAATTTAATaaaaaaa                                                                             >  1:3772887/1‑128 (MQ=255)
                                                  ttttttatTTTTTTAATTTTAAAATTTTAAAAAAATAATTTTTAATTTTTAAAAAAA‑‑TTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAAt                                                                            <  1:584115/123‑1 (MQ=255)
                                                   tatatatTTTTTTTATATTTAAATTTTTTAAAAATTAATTTTTAATTTTAAAAAATTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                                             <  1:1038576/125‑1 (MQ=255)
                                                   tAGTTATTTTTTGTATATTGAAATTTTTAAAAAATTTAATTTAAATTGTAAAAAAATGC‑‑CTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAAt                                                                            <  1:2577967/128‑1 (MQ=255)
                                                    aGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAATTAg                                                                          >  1:2319456/1‑128 (MQ=255)
                                                     ttttttttttGTATTTTAAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                                          <  1:2258090/124‑1 (MQ=255)
                                                     tatatTTTTTGTTTATTTAAATTTTTTAAAAATTATTTTTAAATTTTAAAAAATA‑‑‑TATTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                                         <  1:525741/127‑1 (MQ=255)
                                                      atatTTTTTGTATATGTAAATTTTTAAAATATTAATTTGAATTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                                         <  1:1893910/128‑1 (MQ=255)
                                                       ttttttttttttATTTAAATTTTTAAAAAATTTATTTTAAAATTTAAAAAATTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                                         <  2:2892339/126‑1 (MQ=255)
                                                       tatTTTTTTTTTATTAAAATTTTTTAAAAATTTATTTTTAATTTTAAAAAATTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                                         <  2:2815740/128‑1 (MQ=255)
                                                       atttttttttATATGCAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                                          <  1:872348/126‑1 (MQ=255)
                                                        atTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGGTATTTTTTTTTCTAATTATATAAAAAAATATaaa                                                                       >  2:3740821/1‑128 (MQ=255)
                                                          tttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATGTATTTTTTTGTATAAGTATATAAAAAAATAaaaatta                                                                    >  1:1283845/1‑125 (MQ=255)
                                                           ttttttttattaaaaTTTTTTAAAAATTAATTTTAAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGa                                                                    <  1:1009766/116‑1 (MQ=255)
                                                           ttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTGTTGTATAATTATCTAAAAAAATATAAAGTaa                                                                   >  2:2222182/1‑128 (MQ=255)
                                                             tttttattttaaaTTTTTAAAAAATTAATTTTAAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                                  <  2:1335730/118‑1 (MQ=255)
                                                              tGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGaataa                                                                >  1:2477976/1‑128 (MQ=255)
                                                               ttttattaaatttttATAAAAATTTATTTTAACTTTTAAAAAATATCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaaa                                                                 <  2:2082904/117‑1 (MQ=255)
                                                                tataTGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTGTTGTCTAAGATTCTAAAAAAATACAAATGAAAAAat                                                              >  1:618125/1‑128 (MQ=255)
                                                                 atatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATGTATTTTTTTTTATAAGTATATAAAAAAATAAAAAGTAAAAAat                                                              >  2:3343672/1‑128 (MQ=255)
                                                                   atGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTTGTATTTTTTTGTCTAATTATCTAAAAAAATATAAAGTAAAAAATAtt                                                           >  2:3404863/1‑128 (MQ=255)
                                                                     gCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTTATAATTATCTAAAAAAATATAAAGTAAAAAATAtttt                                                         >  1:1719644/1‑126 (MQ=255)
                                                                      cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAAAATGAAAATTTAAATTTTAGTTATTTTTTTTTAAAATTATATAAAAAAATAAAATGTAAAAATAtttt                                                         >  2:3070623/1‑126 (MQ=255)
                                                                         aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAAATGTAAAAAAAAATTTTAGGTTTTTTTTTTGATAATTTAATAAAAAAATATATAGAAAAAataattttt                                                       >  2:3012264/1‑122 (MQ=255)
                                                                             tttaaaaattaattTTAAATTTTTAAAAAT‑‑‑TTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                                 <  1:2403639/122‑1 (MQ=255)
                                                                              taaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTTTTGTCTAAGTATATAAAAAAATAGAAAGTAAAAAATATTTTAAAAATTaa                                                >  2:3270438/2‑128 (MQ=255)
                                                                               ataaaattaattTTAAATTTTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATa                                              <  1:286094/124‑1 (MQ=255)
                                                                                aaaaattatttTGAACTTGTAAAAAATAG‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAt                                               <  1:1428890/125‑1 (MQ=255)
                                                                                 aaaattaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTTTATAAGTATATAAAAAAATATAAAGTAAAAAATATTTTTAAAATTaaaaa                                             >  2:1212378/3‑125 (MQ=255)
                                                                                  aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTAGTATTTTTTTTTAATAATTAAAAAAAAAAAATAAAAGTAAAAAATATTTTAAAAATaaataa                                            >  2:226796/2‑124 (MQ=255)
                                                                                   aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGTATAATTATCTAAAAAAATATAAAGGAAAAAATATTGTTAAAATAAATACt                                            >  2:3880642/1‑128 (MQ=255)
                                                                                    attaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGTAAAAATAAATTTTTGTTATTTTGTTTTATATTTATATAAAAAATTTGAATTAAAAAAATTTTTTAAAAATTAATaa                                             >  2:414788/1‑127 (MQ=255)
                                                                                    attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTATAATTATAAAAAAAATTATAAATTAAAAAATATTTTTAAATGTAataata                                           >  1:2037699/1‑128 (MQ=255)
                                                                                     ttaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAT‑‑TGTAAATAAAAATTTTAGGTATTTTTTTGTATAATTATCATAAAAAATATAAAGTAAAAAATATTGTTAAAATTAATAATaaa                                         >  2:472281/1‑128 (MQ=255)
                                                                                        attTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATTGAAATATAAATTTTTTTTATTTTTTTTTATAATTTAATAAAAAAAAAGAAATTTAAAAATATTTTTAAAAATaaaaaataaaaa                                      >  1:3359862/1‑118 (MQ=255)
                                                                                         aattttaattttAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTGTTGTCTAATTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAat                                       <  1:937588/117‑1 (MQ=255)
                                                                                          tttGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAATAATTTTTTTGTAAAAGTAAAAAAAAAATTATAAATGAAAAAAATTATTTAAAATTAATACTAAAatt                                      >  2:2647305/1‑128 (MQ=255)
                                                                                           ttGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTTTATAATTATCTAAAAAAATATAAAGTAAAAAATATTTTTAAAAGTAATAATAAAatt                                      >  1:3881259/1‑128 (MQ=255)
                                                                                             gAACTTGTAAAAAATAGC‑‑TTCTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAAAATTTTTAAAAGTAAAAATAAAataatt                                   >  2:2521455/1‑128 (MQ=255)
                                                                                              aaCTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTATTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                                  <  1:3203490/128‑1 (MQ=255)
                                                                                                tattttttaaaTATTTTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                                  <  2:1581908/120‑1 (MQ=255)
                                                                                                    tttttaaaaatattttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg                              <  2:2477976/116‑1 (MQ=255)
                                                                                                    tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTATAAGTATCTAAAAAAATAGAAAGGAAAAAATATTTTATAAAGTATTAATAAAATTATTTattttt                            >  1:4011154/1‑123 (MQ=255)
                                                                                                      ttaaaaatatttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtt                            <  1:3113987/119‑1 (MQ=255)
                                                                                                       tataattatttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtta                           <  2:94732/120‑1 (MQ=255)
                                                                                                         aaTAGCTTTTTTTTTTTTTTTAAAAAAATTAAAATATAAATTTAAGATATTTTTTTAAAAAAAAATAAAAAAAAATAAAAAAAAAAAAATATTTTTAAAATAAAAAATAAAATTATATaaattatata                        >  2:1489187/1‑120 (MQ=255)
                                                                                                          aaatagctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTGTCTAAGTTTATAAAAAAATATAAAGGAAAAAATATTTTTAAAAGTAATAATAAAATTATttaattttaatt                        >  1:3467862/8‑128 (MQ=255)
                                                                                                          aaatagctttttttttttttttttAAAAAGTAAAAAAAAATTTAAAATTTTTTGTTGAAAAAATAAAAAAAAAAATAAAAATAAAAAAATATTTTAAAAAAAAAAAAAAAAATTATTAAATAttaatt                        >  2:2354521/8‑128 (MQ=255)
                                                                                                           tttttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta                       <  1:2183536/124‑1 (MQ=255)
                                                                                                           aaatttcttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta                       <  1:1627921/121‑1 (MQ=255)
                                                                                                             tagctttttttttttttttttATATTTGAAATATAATTTTTTGGTATTTTGTTGGCTTAGTATGTAAAAAAATTGATTGGATAAAATATTGTTTATAGTATAAATAAAATTATTTATAGttatttata                     >  2:2737871/5‑126 (MQ=255)
                                                                                                               gctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTATATTTTTCTAAAAAAATATAAATGAAAAAATATTTTTAAAATTAATTATAAAATTATTTAAATTTAAATaaaaa                   >  1:1583524/3‑127 (MQ=255)
                                                                                                                   tttttttttttttttATAATGGAAATATAAATTTTAGGTTTTTTTTTTTGTATTTTAAAAAAAAAATATAAAGGTAAAAAAATTTTTAAAATTATTAAAAAATATATATAATTTTAATAAAAAATtat               >  2:1113523/1‑127 (MQ=255)
                                                                                                                   tttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaa               <  2:3680488/128‑1 (MQ=255)
                                                                                                                    ttttttttttttttATAATGTAAATATAAATTTTAGTTTTTTTGTTTTATATTTTTATAAAAAAATATAAAGAAAAAAATTTTTTTAAAATTATTAATAAATTTATTTATTTTTAATTAAAAATaaaa              >  1:1347727/1‑128 (MQ=255)
                                                                                                                    ttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTGTATAAGTATCTAAAAAAATATAAAGGAAAAAATATTTTTAAAATTAATACTAAAATTATTAAATTTTaattaaaaattaaa              >  1:3509193/1‑128 (MQ=255)
                                                                                                                     tttttttttttttATAATGGAAATATAAATTTTAGTTTTTTTTTTGTAAAATTATAAAAAAAAATATAAAGGAAAAAATATTTTTAAAATTAAAAATAAAATTTTTTAATTTTAATTAAAATTtaaat             >  2:793527/1‑128 (MQ=255)
                                                                                                                      ttttttttttttATAATGGAAATATAAATTTTAGGTTTTTTGTTGTATAAGTATATAAAAAAATAAAAAGTAAAAAATTATTTTAAAATAAAATCTAAAATTATTTAATTTTaattaaaaattaaaaa            >  1:3306837/1‑126 (MQ=255)
                                                                                                                      ttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaaata            <  1:2733314/128‑1 (MQ=255)
                                                                                                                        ttttttttttATATTTGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaaataaa          <  2:3140227/128‑1 (MQ=255)
                                                                                                                              ttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATaa    <  2:167983/128‑1 (MQ=255)
                                                                                                                              ttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATaa    <  2:2001852/128‑1 (MQ=255)
                                                                                                                                |                                                                                                                                
TAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAA  >  CP016816/165140‑165394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.