New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_021214 = 158156176 (0.780)4 (0.020) 4/438 15.4 2.1% coding (639/648 nt) TMARI_RS00740 lactate utilization protein
?NC_021214 = 158314 198 (0.910)coding (1747/1872 nt) TMARI_RS00745 DUF4914 domain‑containing protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCAAAAAACGTGGTTGTGATAGCGAGTGTGAACAAGGTGGTGAAAGACGTAGAGGAGGCGAGAGAAAGGCTGAGATACATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAGACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_021214/157911‑158156
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagacttcTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAG  <  NC_021214/158314‑158078
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
CCAAAAAACGTGGTTGTGATAGCGAGTTTGAACAAGGTGGTGAAAGACGTAGAGGAGGCGAGAGAAAGGCTGAGATACATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGA                                                                                                                                                                                                                                                      <  2:908677/239‑1
 CAAAAAACGTGGTTGTGATAGCGAGTGTGAACAAGGTGGTGAAAGACGTAGAGGAGGCGAGAGAAAGGCTGAGATACATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAA                                                                                                                                                                                                                                                     <  2:606892/239‑1
   AAAAACGTGGTTGTGATAGCGAGTGTGAACAAGGTGGTGAAAGACGTAGAGGAGGCGAGAGAAAGGCTGAGATACATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAG                                                                                                                                                                                                                                                    >  1:241702/1‑238
    AAAACGTGGTTGTGATAGCGAGTGTGAACAAGGTGGTGAAAGACGTAGAGGAGGCGAGAGAAAGGCTGAGATACATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGTTGATTCTGACGCTGGAAG                                                                                                                                                                                                                                                    >  2:821312/1‑237
                                                                              ATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAGACTTCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGT                                                                                                                                                                            >  2:584511/1‑235
                                                                                                                                          TGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAGACTTCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGG                                                                                                            <  1:584511/239‑1
                                                                                                                                                      TCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAGACTTCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGC                                                                                                              <  1:330011/225‑1
                                                                                                                                                      TCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAGACTTCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGC                                                                                                              >  2:330011/1‑225
                                                                                                                                                                                                                                              AAGACTTCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTA         <  1:815693/238‑1
                                                                                                                                                                                                                                                  CTTCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGCATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGACCCTTCCCGGCTGTCCCACCCCAGATTCCACTACCAGAAAGTAGTCAC    >  2:557008/1‑239
                                                                                                                                                                                                                                                    TCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAG  <  1:152179/239‑1
                                                                                                                                                                                                                                                    TCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAG  >  1:855110/1‑239
                                                                                                                                                                                                                                                    TCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAG  <  2:499356/239‑1
                                                                                                                                                                                                                                                    TCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTAACAG  >  2:252420/1‑239
                                                                                                                                                                                                                                                    TCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAA            <  1:44775/229‑1
                                                                                                                                                                                                                                                    TCTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAA            >  2:44775/1‑229
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
CCAAAAAACGTGGTTGTGATAGCGAGTGTGAACAAGGTGGTGAAAGACGTAGAGGAGGCGAGAGAAAGGCTGAGATACATCTCTCCGATGAATTCGAAACGACTGAATCTGGAAACACCGTGCACAAAAACAGGATTCTGTGCAGACTGTTCTTCTCCTCAGAGGATCTGTGACTACTTTCTGGTAGTGGAATCTGGGGTGAGACAGCCGGGAAGGTTCAAGGTGATTCTGACGCTGGAAGACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_021214/157911‑158156
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagacttcTTCAAGAGAGAACTGAAAAAATTCCTGACCGAAGACCTGAATCCCGTGGGAAGAGAAATCATCCAGTGCTGTCTCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAG  <  NC_021214/158314‑158078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.