| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_021214 | 1674032 = | 286 (1.270) | 4 (0.020) | 4/438 | 15.4 | 1.5% | coding (737/1074 nt) | TMARI_RS08680 | tetratricopeptide repeat protein |
| ? | NC_021214 | 1674159 = | 247 (1.140) | coding (864/1074 nt) | TMARI_RS08680 | tetratricopeptide repeat protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAATATCATCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/1674277‑1674032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgccgaAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAACGGGCTTGTGGTATC‑TCCTGACGTTCGCAATAGGCACCATAGTT > NC_021214/1674159‑1674392 CAATATCATCGAGGATTTCTCTTGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCG < 1:657413/239‑1CAATATCATCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCG < 2:633519/239‑1 TATCATCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATGCTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTT > 1:43290/1‑238 TCATCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCC < 2:585032/239‑1 TCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGtg > 1:477968/1‑237 TCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGGTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGTGCTTCCCTTCCATTTCCCGTGCCTTTTCTTCTTTGCCtag > 2:256718/1‑236 CTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGAAAGGGTAAT > 2:908229/1‑239 TGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGA < 1:649982/187‑1 TGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGA > 2:649982/1‑187 TCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAAC < 1:908229/236‑1 GTTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAACGGGCTTGTGGTATC‑TCCTGACGTTCGCAATAGGCACCATA > 1:569899/1‑239 GTTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAACGGGCTTGTGGTATC‑TCCTGACGTTCGCAATAGGCACCATA > 2:677645/1‑239 TTGCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAACGGGCTTGTGGTATC‑TCCTGACGTTCGCAATAGGCACCATAG > 2:443585/1‑239 TTGCCGAAGAGCTTGAAAAGATCGCTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAACGGAGCTATTGGACGAACTTCTCACGTGGGAGGGAAAACTGGCTTGTGG‑ATCTTCCTGACGTTCGCAATTGGCACCATAG > 2:571332/1‑239 GCCGAAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAACGGGCTTGTGGTATC‑TCCTGACGTTCGCAATAGGCACCATAGTT > 1:637750/1‑239 CAATATCATCGAGGATTTCTCTCGCCTTATCGATTTGACCGAGTTTCACATAGGGAACCACGAGGAGCAGCCGTGCCAGGGTGTTCAGCGGAGAAGATTCAACGATCTTTTCAAGCTCTTCGGCAACTTCTTTGTATCTTCCGTGTTTCAGCATCACGCGAGCCCATGGTTCTAATTCTGTGGGATACTTGGGTTTACAGTTCATGATCTTCTCTTCCATTTCCCGTGCCTTTTCTTCGTTGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/1674277‑1674032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgccgaAGAGCTTGAAAAGATCGTTGAATCTTCTCCGCTGAACACCCTGGCACGGCTGCTCCTCGTGGTTCCCTATGTGAAACTCGGTCAAATCGATAAGGCGAGAGAAATCCTCGATGATATTGGACAGAGCAATTTCTGGTATTATTATGGAAAAAAGGAGATACTGGACGAACTTCTCACGGAGGAGGAAAAACGGGCTTGTGGTATC‑TCCTGACGTTCGCAATAGGCACCATAGTT > NC_021214/1674159‑1674392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |