| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_021214 | 1732299 = | 215 (0.960) | 4 (0.020) | 4/434 | 15.3 | 1.7% | coding (201/1128 nt) | TMARI_RS08985 | butyrate kinase |
| ? | NC_021214 | 1733235 = | 247 (1.150) | coding (41/657 nt) | TMARI_RS08990 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCTCTGATAGTTTGGATGTCCGCTGACACGTGCAACATCTTCCATTTCATCGACAACGACGGGATCCACCACGTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/1732546‑1732299‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggaaaaaCAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG > NC_021214/1733235‑1733465 TTCTCTGATAGTTTGGATGTCCGCTGACACGTGCAACATCTTCCATTTCATCGACAACGACGGGATCCACCACGTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATCCACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAA > 2:747613/1‑239TTCTCTGATAGTTTGGATGTCCGCTGACACGTGCAACATCTTCCATTTCATCGACAACGACGGGATCCACCACGTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGCATGGGATCGAGGAGTACTCCTCGGCTGACAAAA > 1:813585/1‑239 CTGATAGTTTGGATGTCCGCTGACACGTGCAACATCTTCCATTTCATCGACAACGACGGGATCCACCACGTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGG < 1:840176/239‑1 ATAGTTTGGATGTCCGCTGACACGTGCAACATCTTCCATTTCATCGACAACGACGGGATCCACCACGTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGGATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAA > 1:715139/1‑239 ACGTGCAACATCGTCCATTTCAGCGACAACGACGGGATCCACCACGTAGGCTGGAACCTCCGTTTCAGACGAGAATCTGTGGGCTATGATCGGTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAAAACAGAAATATCGATCAATCT < 2:749103/239‑1 GTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGA > 2:339111/1‑239 atgTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACACCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAG < 1:843689/234‑1 TATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAAAACAGAAATATCGATCAATCGGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACC < 1:339111/238‑1 AGCGTAAAATAAGAAATGTCGATGAAGCTGGACTTAAAACTGAAGAGTTCAGGGAAGGACGTATCACTGGTCGATCAGGATGTGGTAACACATTATTTCAGATTTAGAGACCTGAAGAAAAAGTTAAAAGAACTCGGAATCCACCTTGTGACATTGGGACACTACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGGCA < 2:480821/238‑1 AGCGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACA < 2:399745/238‑1 GCGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACG > 2:848784/1‑239 GCGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACG > 2:188332/1‑239 CGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG > 1:147579/1‑239 CGGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG > 2:575009/1‑239 GGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG < 2:943143/238‑1 GGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG < 1:839818/238‑1 GGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG < 1:248842/238‑1 GGAAAAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG < 1:232581/238‑1 AAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCA < 2:674257/210‑1 AAACAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCA > 1:674257/1‑210 TTCTCTGATAGTTTGGATGTCCGCTGACACGTGCAACATCTTCCATTTCATCGACAACGACGGGATCCACCACGTAGGCTGGAACACCCGTTTCAGACGAGAATCTGTGGGCTATGATCGCTCCCAGATTCGAAGCGTGTTCTCCGTTTTTTCCTGATTTCAGGGTTTTTATCATTAGGCCGTCCACCAGATACACTCCCCCGGGTATGGGATCGAGGAGTCCTCCTCGGCTGACAAAAGCGGAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/1732546‑1732299‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggaaaaaCAGAAATATCGATCAATCTGGCCTTAAAACTGAAGAGTTCGGGGAAGGACGTATCACTGGTCGATCTGGATGTGGTAACACCTTATTTCAGATTGAGAGACCTGAAGAAAAAGTTAGAAGAACTCGGAATCCACGTTGTGACAGTGGGAGACAACCTCAGATACAGCGACTTGCCGATCATACCAAAGAACACAGACTGGCTGTCCAGTGAAGAAGCCGTCATCGACACGG > NC_021214/1733235‑1733465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |