| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_021214 | = 360433 | 334 (1.170) | 6 (0.020) | 5/428 | 23.8 | 1.9% | coding (756/1242 nt) | TMARI_RS01750 | MFS transporter |
| ? | NC_021214 | = 360642 | 317 (1.160) | coding (965/1242 nt) | TMARI_RS01750 | MFS transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTGTTTCTTGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_021214/360184‑360433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtgatgaaaAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGTAAGGA < NC_021214/360642‑360406 CGTGTTTCTTGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGA < 2:46338/240‑1CGTGTTTCTTGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGA > 1:416957/1‑240CGTGTTTCTTGGGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTACGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGA < 1:946544/240‑1 TGTTTCTTGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAG > 1:915728/1‑240 GTTTCTTGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGT > 2:637121/1‑240 GTTTCTTGTGAATGGAGTGCCTTTTGTCCGCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGTCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCAGTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAG < 1:520709/239‑1 TGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAA > 2:139607/1‑240 CATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAA > 2:956112/1‑240 AACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGT > 2:1149437/1‑239 CTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTG > 1:934636/1‑239 ATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGG < 2:934636/240‑1 CTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAA < 1:1149437/240‑1 CTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAA < 1:956112/240‑1 AAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCG < 2:762396/240‑1 AAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATC < 1:720543/239‑1 AAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATC < 1:877282/239‑1 AAGTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATC < 1:977045/239‑1 AAGGGATGAAACACAACGAGAAGAGGAACAGACTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCACAAAAAGAAAGATAGAGATCTTCATGGCCTGCCACATGTTCTTCTTCGACAGGTACGATGCACTCAAAAAGTGCCCAAGGAGTGCCCCTAAGTAGAAGGAGGTGTCTAGGAAACCAAATTCCTCAGCCGGAAATATATTCCCTTCCCTcaccg > 1:662317/1‑235 GTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTG > 1:366772/1‑240 GTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGT > 2:814884/1‑168 GTGATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGT < 1:814884/168‑1 GATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGT < 2:1016657/239‑1 GATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGT < 2:1069274/239‑1 GATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGT < 1:1149857/239‑1 GATGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGT < 1:628687/239‑1 TGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGGAAATTTCATCACTTCCCTGATCGTGTAAG < 1:559047/240‑1 TGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGTAAG < 1:464717/240‑1 TGAAAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGTAAG < 2:603567/240‑1 AAAAACAACGAGAAGAGGACCAGTCTGTGCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCGAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGTAAGGA < 2:364113/240‑1 AAAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGTAAGGA < 1:352173/239‑1 CGTGTTTCTTGTGAATGGAGTGTCTTTTGTCCTCTCTGCCATCAGTGAGATCTTCATCGTTTACAGCCGAAAGGTGGAGAAAAAGCCAGCAAAATTCTCTCAGATCCTTGAAGATCTCAAAGAAGGATTTCTCTTCATCTGGAACCACGAGCTCATACGAACCATTCTGATCTTCGCACTTTTTCTGAATCTGCTCATCTCTCCGCTGTTCATGGTGGTGTATCCTTACACGATCAGGGAAGTGATGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_021214/360184‑360433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtgatgaaaAACAACGAGAAGAGGACCAGTCTGTTCAAGGAAAAATCAGGCATAACGAGAAAGCCAAGGAAGACGATGGGAAGCTCAAAAAGAAAGATAGAGATCTTCATGGCCTTCCACATGTTCTTCTTCGACAGGTACGATGCAATCAAAAAGTTCCCAAGGAGTGCCCCTAAAGTGAAGGAGGTCTCCAGGAAACCAAATTCCTGAGCCGAAAATTTCATCACTTCCCTGATCGTGTAAGGA < NC_021214/360642‑360406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |