New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_021214 = 491988296 (1.030)6 (0.020) 5/434 24.0 1.9% coding (711/936 nt) TMARI_RS02360 RluA family pseudouridine synthase
?NC_021214 = 492118 318 (1.150)coding (581/936 nt) TMARI_RS02360 RluA family pseudouridine synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGGGAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_021214/491742‑491988
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccctgTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCACGCCC  <  NC_021214/492118‑491882
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
AGGGAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTG                                                                                                                                                                                                                                                      <  2:1211945/240‑1
AGGGAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTG                                                                                                                                                                                                                                                      <  2:363865/240‑1
AGGGAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTG                                                                                                                                                                                                                                                      <  2:549713/240‑1
   GAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCA                                                                                                                                                                                                                                                    >  1:449082/1‑239
   GAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGC                                                                                                                                                                                                                                                     <  1:376861/238‑1
   GAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGC                                                                                                                                                                                                                                                     <  2:864610/238‑1
   GAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGC                                                                                                                                                                                                                                                     <  2:1029618/238‑1
   GAGATATCACCCATGGAATCATGATCTTTCCCCCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGC                                                                                                                                                                                                                                                     <  2:813690/238‑1
     GATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCCTTTCATGTGCAC                                                                                                                                                                                                                                                   >  1:768352/1‑238
      ataaccCCCATGGGATCCTGCTCCTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCCTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCC                                                                                                                                                                                                                                                 <  1:149770/233‑1
      ATATCCCCCATGGAATCATGATCTTTCCCTCACGTTTTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCC                                                                                                                                                                                                                                                 <  1:542649/239‑1
      ATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCcc                                                                                                                                                                                                                                                   >  1:348891/1‑235
      ATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCC                                                                                                                                                                                                                                                 <  2:614295/239‑1
      ATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCAC                                                                                                                                                                                                                                                   >  2:28628/1‑237
      ATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCAC                                                                                                                                                                                                                                                   >  2:111381/1‑237
      ATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCAC                                                                                                                                                                                                                                                   >  1:156350/1‑237
      ATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCAC                                                                                                                                                                                                                                                   >  1:1190099/1‑237
       TATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCC                                                                                                                                                                                                                                                 <  2:483566/238‑1
       TATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCC                                                                                                                                                                                                                                                 <  2:1190099/238‑1
       TATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCAC                                                                                                                                                                                                                                                   >  2:126977/1‑236
                                                                                                  CCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTGATCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACT                                                                                                                                                    <  1:416030/240‑1
                                                                                                  CCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTGATCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACT                                                                                                                                                    <  2:82988/240‑1
                                                                                                            GCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGA                                                                                                                                                                                    >  1:79378/1‑198
                                                                                                            GCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGA                                                                                                                                                                                    <  2:79378/198‑1
                                                                                                                                                                                              TTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGT                                                                                                                           <  2:879229/173‑1
                                                                                                                                                                                              TTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCGTTTCATGTGCACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGT                                                                                                                           >  1:879229/1‑173
                                                                                                                                                                                                                                                 ACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCAC      <  2:921971/239‑1
                                                                                                                                                                                                                                                 ACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAAAAGCTTCAC      >  1:729471/1‑239
                                                                                                                                                                                                                                                 ACCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGACGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCAC      >  2:536652/1‑239
                                                                                                                                                                                                                                                  CCCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCACGC    <  2:958840/240‑1
                                                                                                                                                                                                                                                   CCTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCACGC    >  2:821570/1‑239
                                                                                                                                                                                                                                                    CTGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCACGCCC  >  2:529337/1‑240
                                                                                                                                                                                                                                                     TGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAA                                                                                                                                                                           <  2:1200330/70‑1
                                                                                                                                                                                                                                                     TGTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAA                                                                                                                                                                           >  1:1200330/1‑70
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
AGGGAGATATCACCCATGGAATCATGATCTTTCCCTCACGTATTCATGGATCCTTCTGATGGCTTCTTTGAAGTCCTCCGGCAGAGGTGAGACGAACTCCATCCATTCGCCCGTTCGAGGGTGGAAGAAACCGAGTTTCAGGGCGTGAAGCATCTGCCTTTTTATTCCGAAGATCTCATCCTCTTTCGGCTTCCCGTAGATTTTGTCTCCCATAATCGGATGACCGAGGCTTTTCATGTGCACCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_021214/491742‑491988
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccctgTTCTGAGGATAAAAATGGCTGTCGTTGAAACAGGGAAAGAAGCGATCACAGAGTACAGAGTTCTGAAAAGGTTCGATGATGTCGCTACACTCGTTCTCGCCTTTCCCAAAACAGGTAGAACACACCAGATCAGGGTGCACATGAAAAGCCTCGGTCATCCGATTATGGGAGACAAAATCTACGGGAAGCCGAAAGAGGATGAGATCTTCGGAATAAAAAGGCAGATGCTTCACGCCC  <  NC_021214/492118‑491882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.