| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_021214 | = 591522 | 246 (0.860) | 6 (0.020) | 6/434 | 23.2 | 2.5% | coding (471/549 nt) | TMARI_RS02865 | DNA polymerase |
| ? | NC_021214 | = 591525 | 234 (0.850) | coding (474/549 nt) | TMARI_RS02865 | DNA polymerase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_021214/591276‑591522‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctccgagGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAGTTTT < NC_021214/591525‑591288 CGAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTT < 1:7215/240‑1CGAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTT < 1:200602/240‑1CGAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTT < 2:547677/240‑1 GAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTC < 2:153802/240‑1 GAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTC < 2:1002665/240‑1 GCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCT > 2:162539/1‑239 GCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCT > 1:397797/1‑239 CGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGCTCGAACACGAATCCTGGGTCTCCGA > 1:524141/1‑240 GGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTCTTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGcg > 2:633215/1‑238 GGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAG < 1:1182496/240‑1 TGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAG < 1:1196434/192‑1 TGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAG > 2:1196434/1‑192 AACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAAAGATCGAACACGAATCCCTGTCCTCCCAGGAACTCGGAAAACCAGGATTCGGGTACGATCTCTTCGTTCAGAATAGCCAGAGAACGTTCGAAGGTCCTGTGA > 1:978837/1‑240 ATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGATCTCCGAGGAACTCGGAGAACCAGGATTCGTGGTCGATCTCTTCGTTCAGAATAGAAAGAGACAGATAGTAGGTCTTGTGAGCTTTACCCGCGGTCATGTGGCATATC‑CTGTGATACCCTTTaccc > 1:509832/1‑235 ACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCCTGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCc > 2:957628/1‑239 ACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGGG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCcccgc > 1:788193/1‑235 ACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCCTTCAGCGGCAACGAGCACCCTCAACATCTCCTGCACTGTTGGTTTG > 1:856226/1‑240 CTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGA < 2:788193/240‑1 CTCCGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAA > 2:266640/1‑240 TCCGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCGTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAG < 1:1066677/240‑1 CGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAGTT > 1:175061/1‑240 CGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACA > 2:345122/1‑199 CGAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACA < 1:345122/199‑1 GAGGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAGTTT > 1:1064868/1‑240 GGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAGTTTT < 1:852303/239‑1 GGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAGTTTT < 1:217976/239‑1 CGAGCTCGGTGGAAAACTTCCAGATTGCATGAAGGAGTTCCACGATCTCTCTGCATGTCCACCAGCAAGACTTCCGGACAAACCAACTGTTCAGGAGATTCTGAGGGTGCTCGTTGCCGCTGAAAGATGTGCGGTGAAAGGGTACACCGAGATATGCAACATGACCGCGGGTAAAGATCACAGGACCTACGAACTGTCTCTTGCTATTCTGAACGAAGAGATCGAACACGAATCCTGGTTCTCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_021214/591276‑591522‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctccgagGAACTCGGAGAACCAGGATTCGTGTTCGATCTCTTCGTTCAGAATAGCAAGAGACAGTTCGTAGGTCCTGTGATCTTTACCCGCGGTCATGTTGCATATCTCGGTG‑TACCCTTTCACCGCACATCTTTCAGCGGCAACGAGCACCCTCAGAATCTCCTGAACAGTTGGTTTGTCCGGAAGTCTTGCTGGTGGACATGCAGAGAGATCGTGGAACTCCTTCATGCAATCTGGAAGTTTT < NC_021214/591525‑591288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |