New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_021214	1440262 =	285 (1.000)	6 (0.020)	5/430	23.9	1.9%	coding (1298/1881 nt)	TMARI_RS07270	NADH dehydrogenase
	?	NC_021214	1440572 =	331 (1.210)					coding (1608/1881 nt)	TMARI_RS07270	NADH dehydrogenase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAGATCCTCGTATGTGGCTTTTCCGTGGGTGAACTTCTCCAATATGTTGTACGCCTGCATGGTTCCTTCCCTGCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_021214/1440509‑1440262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggaaagacCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTCTCTGTG  >  NC_021214/1440572‑1440807                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAGATCCTCGTATGTGGCTTTTCCGTGGGTGAACTTCTCCAATATGTTGTACGCCTGCATGGTTCCTTCCCTGCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTC                                                                                                                                                                                                                                                      <  2:525161/240‑1    ATCCTCGTATGTGGCTTTTCCGTGGGTGAACTTCTCCAATATGTTGTACGCCTGCATGGTTCCTTCCCTGCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGA                                                                                                                                                                                                                                                   >  1:1134311/1‑240      CCTCGTATGTGGCTTTTCCGTGGGTGAAATTCTCCAATATGTTGTACGCCTGCATGGTTCCTTCCCTGCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGCGGGGCATGTCGATGAAATCTTCGGAAA                                                                                                                                                                                                                                                 >  1:1094143/1‑240        TCGTATGTGGCTTTTCCGTGGGTGAACTTCTCCAATATGTTGTACGCCTGCATGGTTCCTTCCCTGCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAG                                                                                                                                                                                                                                                >  2:1034032/1‑239                         GTGGTTGAACTTCTCCAATATGTTGTACGCTTGCTGTGTTCCTTCCCTTCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTGTTCAGTGGGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGACCGCTCCCAACCCCATT                                                                                                                                                                                                                              <  1:670301/240‑1                                                                                    cCTTTCCACTGGATTCCCTCTTAGACAAATCGAGGAAGAACCTTGCAACCTTTACCTTACTCTTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGACCGCTCCCATCCCCATTCTCAGTACCCTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCC                                                                                                                                                                   <  1:145820/239‑1                                                                                                                                    CCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATAT                                                                                                                   <  2:662367/240‑1                                                                                                                                                                   GACTATTCTACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCAC                                                                                                                                                                                      >  2:866315/1‑142                                                                                                                                                                   GACTATTCTACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCAC                                                                                                                                                                                      <  1:866315/142‑1                                                                                                                                                                   GACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGAT                                                                                      >  2:995765/1‑238                                                                                                                                                                                                                                               TCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTC        <  1:76048/240‑1                                                                                                                                                                                                                                               TCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTC        <  2:945683/240‑1                                                                                                                                                                                                                                               TCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGAT                                                                                                                     <  2:137163/131‑1                                                                                                                                                                                                                                               TCGGAAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGAT                                                                                                                     >  1:137163/1‑131                                                                                                                                                                                                                                                   AAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGA                                  >  1:677498/1‑210                                                                                                                                                                                                                                                   AAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGA                                  <  2:677498/210‑1                                                                                                                                                                                                                                                   AAAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAG‑GGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTCTCTGT   >  1:683471/1‑240                                                                                                                                                                                                                                                    AAGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTCTCTG    <  1:880241/239‑1                                                                                                                                                                                                                                                     AGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAGTACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCGGTCCACAGAACGCCATAGCCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTCTCTGTG  <  2:694762/240‑1                                                                                                                                                                                                                                                     AGACCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTCTCTGTG  <  1:1170689/240‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAGATCCTCGTATGTGGCTTTTCCGTGGGTGAACTTCTCCAATATGTTGTACGCCTGCATGGTTCCTTCCCTGCACGGCACGCACTTTCCACAGGATTCCCTCTTGGTGAAATCGAGGAAGAACCTTGCAACCTCTACCATACACGTTTTCTTTGTAATCACGACTATTCCACCGGATCCTACCATCGCATCAGCTTTTTTCAGTGTGTCGTAATCGAGGGGCATGTCGATGAAATCTTCGGAAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_021214/1440509‑1440262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggaaagacCGCTCCCAACCCCATTCTCAGTACACTGAAGCTCTTCAGAGAGGAGTACATTGCACACATCGAAGGAGAATGTCCAAGCGGAATGTGCACGGCGTTCAAGAAATACGTCATCAATCCAGATATCTGTAAAGGTTGTGGACTCTGTGCCAGATCCTGTCCACAGAACGCCATAACCGGAGAAAGAGGAAAACCGTACACGATAGATCAGGAAAAGTGTGTAAAGTGCGGTCTCTGTG  >  NC_021214/1440572‑1440807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.