New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_021214 | = 1501608 | 304 (1.060) | 5 (0.020) | 4/426 | 24.6 | 1.7% | coding (553/2088 nt) | TMARI_RS07670 | elongation factor G |
? | NC_021214 | = 1501747 | 288 (1.060) | coding (414/2088 nt) | TMARI_RS07670 | elongation factor G | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TGGCTTTTGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_021214/1501359‑1501608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcgctttcatGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAGAGAAGAGA < NC_021214/1501747‑1501509 TGGCTTTTGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCTGCATATCTCTTTCCTCGTAACCAGATCCATCTTCGCTGACCCAGTAGA > 1:749481/1‑240 TGGCTTTTGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGA > 2:763494/1‑240 TGGCTTTTGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGA > 1:556591/1‑240 GGCTTTTGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGAT < 2:232813/240‑1 TGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTT < 1:1175807/240‑1 TGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTT < 2:1211484/240‑1 TGCCGATCCACAGAGAGCGGGAACTGCTTTGTTGTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCCTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTTTACAGATCCATCTTCGCTGGCCCAGTAGATCGCTTT < 1:156978/240‑1 CGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGTCCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCAT < 1:1056481/240‑1 CGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCAT < 1:805939/240‑1 CTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCT > 2:870087/1‑240 AGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGT > 1:991005/1‑240 TTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACC < 2:1042579/240‑1 TTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCT < 2:991005/240‑1 TTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCT < 1:870087/240‑1 GATCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAG > 1:749002/1‑240 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGTAGAAATGAGAA > 1:1122230/1‑240 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAA > 1:331130/1‑240 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAA > 2:540146/1‑240 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGA < 1:793514/239‑1 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGA < 1:60899/239‑1 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGA < 2:729536/239‑1 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGA < 2:235886/239‑1 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACC < 1:720014/141‑1 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACC > 2:720014/1‑141 TCGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCAATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTGCTGGGTCAGCGAAGATGGATCTGTGTACGTGGAAAGAGATATTCCGGAGGAACTCAGAGAAGCAGCAGcagtgggag > 1:1005941/1‑231 CGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAG < 1:293198/240‑1 CGCTTTCATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAG < 2:895802/240‑1 CATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAGAGAAGA > 1:835273/1‑240 CATGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGGGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTGCGGAGGAACTCAGAGAAGAAGACGAAATGAGAAGAGAAGA > 1:227198/1‑240 TGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAGAGAAGAGA < 2:845385/240‑1 TGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTGGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACGTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTGCTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAGAGAAGAGA < 2:1005941/240‑1 TGGCTTTTGCCGCTCCACAGAGAACGGGAACTGCTTTGTTTTCTATGGTGGCTTTTCTCAAGACCCTCTTTATTTCTTCTTCGGAAATTTCCTCGCCTTCGAGGTATTTTTCAAGAATTTCTTCGTCGAGTTCTGCGATTTTTTCAAGCATCTCTTCTCTTCTCATTTCTGCTTCTTCTCTGAGTTCCTCCGGAATATCTCTTTCCTCGTACACAGATCCATCTTCGCTGACCCAGTAGATCGCTTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_021214/1501359‑1501608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcgctttcatGAACAAGATGGACAAAGTGGGAGCAGATTTCTACATGGCCGTTGAAACTCTTGTAACAAAACTCAGGGCAAATCCCATTCCGGTGCAGATGCCGATCGGCAGTGAGAAAGACTTCCAGGGTGTGATTGACCTCATAAAAATGAAAGCGATCTACTGGGTCAGCGAAGATGGATCTGTGTACGAGGAAAGAGATATTCCGGAGGAACTCAGAGAAGAAGCAGAAATGAGAAGAGAAGAGA < NC_021214/1501747‑1501509 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |