Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_021214 | 622,272 | 0 | A | C | 25.4% | 428.9 / 11.6 | 190 | T55P (ACT→CCT) | TMARI_RS03015 | rod shape‑determining protein |
Reads supporting (aligned to +/- strand): ref base A (112/29); new base C (2/46); total (114/76) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.54e-21 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 194 total aligned reads displayed.
TTCACCTCCGCTACTAAAAAAATTCTATCAGATGATATAATCCTTATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCATAGAAGAGCCCATGGCG > NC_021214/622033‑622511 | ttCACCTCCGCTACTAAAAAAATTCTATCAGATGATATAATCCTTATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGC‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGAAAGGaaaa‑a > 1:180729/1‑240 (MQ=255) cTCCGCTACTAAAAAAATTCTATCAGATGATATAATCCTTATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGCGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGACGGGCGGGC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTccc > 1:354430/1‑240 (MQ=255) ccGCTACTAAAAAAATTCTATCAGATGATATAATCCTTATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCg > 2:862288/1‑239 (MQ=255) cgatctgagtatatAATCCTTAT‑GAGATACGGGCGCATGGGGGGA‑G‑GAATACGGTGTTGAAAAAAATA‑AAAGGAAAAGGGGTCGGGTCGGAAACCCCCCTGGTT‑TTTGTAGGGGGAAAAGGCATCGTGGAGAAGGA‑GACAG‑GGGTCAAGGG‑GTTTGATCCGACCAGAGGG‑GAGATACTGAAGGGCGGTC‑GAGAAAGA‑AAAAAAATGATAAAAAAA‑A‑CTCCCGCCACGATCAAGGCCATaa < 1:594314/230‑1 (MQ=255) tgatATAATCCTTAACGAGA‑ACGTGACCATGGGAGGA‑G‑GAATGCGGTGTGGAAAAAAAAC‑ATAGGAATAGATCTCGGTACGGAAAACCCCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATAA‑CCCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TGGAAGCA‑AAAAACATGATAGAAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCa < 2:123155/238‑1 (MQ=255) atatAATCCTTATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAAAATGATAGGAAAA‑A‑ATCCCGCCACGAACAAGGCCATAAGGCCCATGAg > 1:1225/1‑240 (MQ=255) taTCTTTACCGAAA‑ACGTGACAATGGGAGGA‑G‑GAATACGGTGTGGAAAAAAGAC‑ATAGTAAAAGATCTCGGTACGGCAACCCCCCTCGTT‑TTTCTGAGAGAGAAAGTGATGGTGTTGAATGA‑ACAGG‑GGGTGAGAGC‑AAAAGATCCGACCACAGGG‑GAAATACTGAAGGCCGTTC‑CCAAAGAA‑AAAAACATGAGAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGAt < 1:153381/239‑1 (MQ=255) ttATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGACGCG‑AAAAACATGATAGGAAAA‑A‑ATCCAGCCACGATCAAGGCCATAAGGACCATGAGGGATGGCGt > 1:366918/1‑240 (MQ=255) tATCGAGA‑ACGTGACCCTGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAACAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 2:416879/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACCGGT‑GCGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 1:688396/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 2:678706/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 1:1158979/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 2:717371/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 1:1145840/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 1:213618/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 2:769164/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGtt > 2:956840/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGAGCAAGGCCATAAGGCCCATAAGGGATGGCGtt > 1:1054661/1‑240 (MQ=255) tATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGAGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGAGATAGC‑AATAGATTCGACCACAGGT‑GAGATACTGAAGGCCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCAATAAGGCCCATGAGGGATGGCGtt > 2:88237/1‑240 (MQ=255) tcaaaa‑aCGTGACCAGGGGAGGA‑G‑AAATCGGGTGTGAAAAAAAGAC‑ATAGAAATAGTTCTCGGTACGGCAACCCCCCTCGTC‑TTTCTAAGAGGGAAAGGCAGCGTGGTGAATGA‑CCCAT‑GGGTGATAGC‑GAAAGATCCACCCACAGGG‑GAGATCCAGAAGGTCGGTC‑TGGAAGAA‑AAAAACATGAGAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTtat < 1:873115/235‑1 (MQ=255) gaga‑ACGCGACGAGGGGGTGA‑G‑GAATACGGTTGTAAGAAAAAAC‑ATAGGAATAGATCGCGGATCGACAACCCCCCTCTTC‑TTTCTAAGGGGAAAGGGCATGGTGGTGAATAA‑CCCAG‑CGGTGATAGC‑GATAGATCCGACCACGGGT‑GAGATACGAAAGGTGGGTC‑ACGAAGAA‑AAAAAAATGAGAGAAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAg < 1:233359/240‑1 (MQ=255) ga‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCg > 1:336800/1‑240 (MQ=255) aa‑aCGTGGCAATGGAAGAG‑G‑AAATACGGTTTGAAAAAAAAAA‑AAAGGAATGGACCGAGTGACGAAAAACCCCCTCTTC‑TTTCTCAGAGGAAAAGGCATGGGGGTGAATGA‑ACCAT‑GGGTATAAGC‑AATAGATTCCACAACAGGT‑GAGATACTGAAGGTCGTCC‑CCGAAGCA‑AAAAACATGATAGGAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGc < 1:131918/238‑1 (MQ=255) aagTGACCGTGGGAAGA‑GAGAATGGGGTG‑TGAAAAAAAACAAGAGGAATGGATGTGAGTACGAAAACCCCCCCCGTT‑TTCCAAAGGGGGAAAGGCATGGGGGTGAA‑GG‑ACCATGGGGTGATAGC‑GAAAGATCCGAACCAGGGT‑AAGATACGGAGGGCGGGTG‑GCGAAGAA‑AAAAAAAGAAGGGAAAAA‑A‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAg < 1:649508/235‑1 (MQ=255) cgtgccAAGGGGGGAGG‑GAATCGGGTGTGGAAAAAAAAC‑ATAGAAAAAGTTCT‑GGGACGGGCAACCCCCTGCTCTTTTCCAAGGGGGAAAGGCATGGGGGGGAATGA‑ACCGG‑CGGTGAAGGG‑GAAAGATTCGACCACAGGG‑GAGATCCGGAAGGTGGGTC‑GCGAAGCG‑AAAAAAATGATGGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGAc < 1:547125/236‑1 (MQ=255) ccccAGGGGGGGA‑G‑AAATACGTTGTAGAAAAAAGAG‑ATAGAAATAGGTCCGGGTACGCCAACCCCCCTCTTT‑TTTCCAAGAGGAAAAGCCATCTTGGGAAATGA‑ACCAT‑GGGTGA‑AGCGGATAATTTCGACCACGGGT‑GAGATCTTGAAGTCGGGTC‑TGGAGGCA‑AAAACAATAATAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTa < 1:467296/237‑1 (MQ=255) aTGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTta > 2:673039/1‑225 (MQ=255) aTGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCg > 2:1162815/1‑240 (MQ=255) ggggga‑g‑aaATAGGGGGTTGAAAAAAGAA‑AAGGGAAAAGTTCTGGGTCCGGAAACCCCCCTCGTC‑TTTCCAAGGGGGAAAGGCAGCGGGGTAAATGA‑CCCAG‑CGGTGATAGC‑GATAGATTCGACCAGGGGT‑GAGATACGGAAGGTCGGTC‑TGGAAGCA‑AAAAAAAGGAGAGAAAAA‑A‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTg < 1:561203/236‑1 (MQ=255) g‑gaATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTtg > 2:1026210/1‑240 (MQ=255) gtgtTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTc > 2:955173/1‑240 (MQ=255) gtgtTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTc > 2:473227/1‑240 (MQ=255) gtgtTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGACCATGAGGGATGGCGTTATAGCGGACTACCACGCGGCGCTTGTGATggcc > 1:622256/1‑237 (MQ=255) ttGAGAAGAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCACAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGAGATAGC‑GATAGATTCGACAACAGGT‑GAGATCTTGAAGGACGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCAACGATCAGGGCCAAAAAGCCCAGTAGGAACGGTGAAAGAGCGGACTAAACCCTGTCCCTTCTGATGGTCAgg > 1:488876/1‑240 (MQ=255) ttGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATAAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAgg > 1:319084/1‑240 (MQ=255) aaGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCa > 2:153313/1‑240 (MQ=255) gAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATa > 2:757001/1‑240 (MQ=255) gAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATa > 2:354593/1‑240 (MQ=255) aTAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGcc > 2:1194785/1‑240 (MQ=255) cGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCACGGGCgg > 2:92903/1‑240 (MQ=255) cGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGAgg > 2:97231/1‑240 (MQ=255) ccGGCAAACCCCCTCTTC‑TTCCACAGGGGGAAAGGAGTCGTGGTGAAGGA‑ACCAG‑CGGTGATAGC‑GATAATTTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑ACGAAGCA‑AAAAACATGAAAGGAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGgaatg < 2:159305/239‑1 (MQ=255) cacCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGgaa > 2:618916/1‑230 (MQ=255) cacCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGt > 2:308321/1‑239 (MQ=255) cacCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCCCAGGTATTTCATAAACAAAGCAAAGGGCGgaaggaattggt > 1:1132452/1‑235 (MQ=255) ctctcacAGAGGAAAAGGCATGGGGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCAAAGGT‑GAGAAACTGAGGGTGGGTC‑ACGAAGCA‑AAAAACATGATAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTc < 2:802287/233‑1 (MQ=255) tgcagagggggAAAGCCAGGGGGGTGAATGA‑CCCAT‑CGGTGAGAGC‑GATAGTTTCGACCACAGGT‑GAGATAGGGAAGGTCGTTC‑ACGAAGAG‑AAAAACATGATGGGAAAA‑A‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCgtg < 2:1151087/232‑1 (MQ=255) ctccaagagGAAAAGCCATCGGGGTG‑ATGACACCAG‑GGGTGAGAGC‑GAAGGTTTCCCCCAGAGGG‑GAGTTACAGAGGGGCGGTC‑CCG‑AGCGAAAAAACAGAATAGGAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCgtg < 2:761226/235‑1 (MQ=255) agagGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGtt > 1:710246/1‑240 (MQ=255) gagGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAg > 2:1105112/1‑130 (MQ=255) gagGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGC‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGAGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAAGGGATATGTTCAAACCTCGTGTGGTta > 1:244830/1‑240 (MQ=255) aaagggtatggtggtgAAAGA‑CCCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGCC‑TCGAGGAA‑AAAAACATGATAGGAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAg < 2:723709/229‑1 (MQ=255) ctaggtggtaAATGA‑ACCAG‑CGGTGATGGA‑GATAGATTCGACCACGGGT‑GAGATACGGAAGGTCGGTC‑TGGAAGCA‑AAAAACATGAAGGGAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTc < 2:569506/235‑1 (MQ=255) cATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTc > 2:832334/1‑239 (MQ=255) cGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGAt > 2:293892/1‑130 (MQ=255) cGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCAt > 1:15830/1‑240 (MQ=255) tgaatga‑aCCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGATGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGaa > 1:852373/1‑240 (MQ=255) tgaatga‑aCCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGaa > 2:1112331/1‑240 (MQ=255) tgaatga‑aCCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGaa > 1:781729/1‑240 (MQ=255) tgaatga‑aCCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGaa > 2:229890/1‑240 (MQ=255) tgaatga‑aCCAT‑CGGCGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGGCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGa > 2:779292/1‑239 (MQ=255) cAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGAtg > 1:515744/1‑240 (MQ=255) aaT‑CGGTGATAGA‑GATAATTTCAACAACGGGG‑AAGAGAC‑GGAGGGCGGTCATCGAAGCA‑AAAAACATAAAAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGAtg < 1:1194785/239‑1 (MQ=255) ggaatggC‑GATAGACTCGACCACGGGG‑GAAATACCGAAGGGCGGTA‑TCGAAGAA‑AAAACCAGGAGAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGa < 1:377486/233‑1 (MQ=255) tGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGa > 2:1211847/1‑212 (MQ=255) aaTAGC‑AATGGATTCCA‑CAGAGGTGGAAATACGGAAGGTGGGTC‑ACGAAGAA‑AAAAACATGA‑AGGAAAA‑ACCCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGaaa < 2:10897/238‑1 (MQ=255) gC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATg > 2:573403/1‑141 (MQ=255) tAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCa > 1:462470/1‑240 (MQ=255) tAGATGCCACCACGGGG‑AAGAAACTGAGGGGGTGTC‑TCGAGGAA‑AAAAACAAGAAAAGAAAC‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCa < 1:105675/240‑1 (MQ=255) gATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCCTAGGAAAAACGGATGTGGAAAGGAGAGCAAt > 1:1135474/1‑239 (MQ=255) cacaGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGAt > 2:549451/1‑238 (MQ=255) caGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTg > 1:291506/1‑240 (MQ=255) gggagaTACTGAAGGTCGTTC‑CAGAAGCA‑AAAAACATGAGAGGAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTgg < 1:906668/236‑1 (MQ=255) tgatatccggAAGGCCGGTC‑TGGAAACA‑AAAAAAAGAAAAAAAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGc < 2:1145840/230‑1 (MQ=255) agttatggagggtgggtc‑TCGAAGAA‑AAAAACAGGATGGAAAAC‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTc < 1:107989/229‑1 (MQ=255) aaTACTGAAGGTCGGTC‑CCGAAGCA‑AAAAACATGAGAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGa < 2:807678/239‑1 (MQ=255) aaTACGGAAGGTCGGTC‑ACGAAGAG‑AAAAACATGAGAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGa < 1:308321/239‑1 (MQ=255) tGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGCATAACGGATGTGGAAAGGAGCGCCATTCTCGATGGTGGGCTCGTGGAgg > 1:358882/1‑240 (MQ=255) tGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCgg > 2:149248/1‑240 (MQ=255) tGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCgg > 1:478470/1‑240 (MQ=255) tGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCgg > 1:938127/1‑240 (MQ=255) gAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAAAAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCggg > 1:278436/1‑240 (MQ=255) aGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCgggg > 2:45804/1‑238 (MQ=255) aGGCCGGTC‑AGGAAGCA‑AAAAACATGAAAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTg < 2:279720/240‑1 (MQ=255) gtcggtc‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGGGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGcc > 2:977786/1‑240 (MQ=255) gctggctgcGAAGCA‑AAAAACATAAAGGGAAAA‑A‑CTCCCGCCACGGTCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACGCCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAGCCTCGTGTGGTTATAGGAGGTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTg < 1:92903/230‑1 (MQ=255) cggtc‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCggggggcgg > 2:1167885/1‑234 (MQ=255) cggtc‑GCGAAGAA‑AAAAACAAGAGAGAAAAC‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCa < 1:678706/239‑1 (MQ=255) gtc‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGGGccgcta > 2:711341/1‑236 (MQ=255) cgcaaaGCA‑AAAAAAATGAAAGAAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTaa < 1:977786/235‑1 (MQ=255) cccgagagaaaaaaCATGAAAGAAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTaa < 1:769164/230‑1 (MQ=255) cGAAGAA‑AAAAAAATGAAAAGAAAACC‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAgg < 1:862288/240‑1 (MQ=255) aaaaaaCATGATAAAAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCttt < 2:342572/237‑1 (MQ=255) aaaaaaCATGAAAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTTAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCttt < 2:537834/237‑1 (MQ=255) aaaaaGTTGAGAGAAAAA‑C‑CCCCCGCCCCGTTCAAGGCCATTAGGCCGATGAGGGATGGCGTTATAGCGGACTACACCGTGTCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTTTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGCGCCATTCTCGATGCTGGGCTCGGGGCGGGTGCCAGTAAGGTCTTtctc < 1:88237/240‑1 (MQ=255) aaaaCATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCa < 2:515744/240‑1 (MQ=255) aacagtGATAGGAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCAt < 2:180729/235‑1 (MQ=255) aaaCATGAAAGAAAAA‑C‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCAt < 1:832334/240‑1 (MQ=255) aaaCAGGATAGAAAAA‑C‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCAt < 2:366918/240‑1 (MQ=255) aagaaaaa‑c‑CCCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCATAGAAGAGc < 2:242543/236‑1 (MQ=255) | TTCACCTCCGCTACTAAAAAAATTCTATCAGATGATATAATCCTTATCGAGA‑ACGTGACCATGGGAGGA‑G‑GAATACGGTGTTGAGAAAAGAC‑ATAGGAATAGATCTCGGTACGGCAAACACCCTCGTC‑TTTCTCAGAGGGAAAGGCATCGTGGTGAATGA‑ACCAT‑CGGTGATAGC‑GATAGATTCGACCACAGGT‑GAGATACTGAAGGTCGGTC‑TCGAAGCG‑AAAAACATGATAGGAAAA‑A‑CTCCCGCCACGATCAAGGCCATAAGGCCCATGAGGGATGGCGTTATAGCGGACTACACCGTGGCCCTTGTGATGCTCAGGTATTTCATAAACAAAGCCAAGGGCGGAATGAATCTGTTCAAACCTCGTGTGGTTATAGGAGTTCCCATAGGAATAACGGATGTGGAAAGGAGAGCCATTCTCGATGCTGGGCTCGAGGCGGGTGCCAGTAAGGTCTTTCTCATAGAAGAGCCCATGGCG > NC_021214/622033‑622511 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |