Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_021214358,5110GA30.2% 292.1 / 75.1 173intergenic (‑93/‑92)TMARI_RS01730/TMARI_RS01735hypothetical protein/DUF2089 domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (11/109);  new base A (52/0);  total (64/109)
Fisher's exact test for biased strand distribution p-value = 1.56e-33
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 178 total aligned reads displayed.

AGCATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCG  >  NC_021214/358274‑358738
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               
aGCATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAgg                                                                                                                                                                                                                                                >  2:972116/1‑239 (MQ=255)
aGCATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAgg                                                                                                                                                                                                                                                >  2:222686/1‑239 (MQ=255)
   aTCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAgggg                                                                                                                                                                                                                                              <  1:1009519/238‑1 (MQ=255)
   aTCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGc                                                                                                                                                                                                                                             <  2:531010/239‑1 (MQ=255)
   aTCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGCTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGTG‑AAAAaggg                                                                                                                                                                                                                                              >  2:285475/1‑239 (MQ=255)
               aGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGCAACG‑AAAAACCt                                                                                                                                                                                                                                >  1:444783/1‑239 (MQ=255)
               aGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAAGGGAAAG‑aaaaat                                                                                                                                                                                                                                  >  1:811427/1‑235 (MQ=255)
                 cacaAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGAGGGAACG‑AAAAAACT‑Ta                                                                                                                                                                                                                             >  2:1144999/1‑239 (MQ=255)
                  acaAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAAGGGGAAAG‑AAAAACAT‑TAc                                                                                                                                                                                                                            >  2:54133/1‑239 (MQ=255)
                  acaAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑Ta                                                                                                                                                                                                                             <  2:526025/238‑1 (MQ=255)
                              ttAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGCGGG‑G‑AAAAAGGGC‑ACG‑AAAAATCA‑TAC‑AA‑AAAAAatttt                                                                                                                                                                                                              >  1:624933/1‑239 (MQ=255)
                                aataatTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAAGGGCAAAG‑AAAATACTCTAC‑TA‑AAAAAattttt                                                                                                                                                                                                             >  1:466124/1‑239 (MQ=255)
                                aataatTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAAGGGAAAAA‑TAAATCAT‑TAC‑AG‑AAAAAatttttt                                                                                                                                                                                                            >  1:1023074/1‑239 (MQ=255)
                                aataatTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAAGGCAAAGAAAAAAAAT‑AAC‑AA‑AAAAAtttttt                                                                                                                                                                                                             >  1:567506/1‑239 (MQ=255)
                                 ataatTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑CAAAAGGGGAAAG‑AAAAAACT‑TAA‑AGCAAAAAttttttt                                                                                                                                                                                                            >  1:1443233/1‑239 (MQ=255)
                                  taatTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTgg                                                                                                                                                                                                          <  2:367621/239‑1 (MQ=255)
                                       aTCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGCAACG‑AAAAACCT‑TTC‑AG‑AAAAAttttttttgggaat                                                                                                                                                                                                     >  2:564360/1‑232 (MQ=255)
                                            ttCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCGATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑GG‑AAAAATTTTTTTGGAGACt                                                                                                                                                                                                     <  2:1342880/234‑1 (MQ=255)
                                              ccTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑aaa                                                                                                                                                                                             <  2:811427/239‑1 (MQ=255)
                                                ttttCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGGAAAG‑AAAAAACC‑TAC‑AG‑AAAAATTTTTTTGGGGACTTGAC‑aaaaa                                                                                                                                                                                           >  2:26524/1‑238 (MQ=255)
                                                   tCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATAtt                                                                                                                                                                                        <  2:358655/239‑1 (MQ=255)
                                                      gTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGCATAATTCTCATCTTTCCCATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCTATACTATTTATATGTAAAGCAAATCTCGTTTCACGGC‑GGCG‑AAAAAGTG‑AAAA‑AACAACAT‑TACAAA‑AAAAATTTTTTTGGATA‑TTCACAAAAATATTTg                                                                                                                                                                                      >  1:1340574/1‑239 (MQ=255)
                                                      gTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGGAAAG‑AAAAACAT‑TAA‑AG‑AAAAAAATTTTTTGGTACTTTGC‑aaaaaaatttt                                                                                                                                                                                     >  1:1409998/1‑232 (MQ=255)
                                                        ccTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTa                                                                                                                                                                                   <  2:627881/239‑1 (MQ=255)
                                                           atattatcGCTGTGAATGGATATCAACACATCTACCGGTATCAACACAAACATTTGCCTCACCACCTTTTGGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATGCTAATTAGATGTAAGGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAAATTTTTTGGAGACTTGCC‑AACATATTTGGTAata                                                                                                                                                                                <  1:409626/233‑1 (MQ=255)
                                                           aTCTTCTCGCTGTTAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAata                                                                                                                                                                                <  2:413592/239‑1 (MQ=255)
                                                            tcttctCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATACT‑TAC‑AG‑AAAAATTTTTTTGGGGACTTGAC‑AAAAAATTTGGTAata‑t                                                                                                                                                                              >  1:29099/1‑239 (MQ=255)
                                                            tcttctCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTAGATGTATAGAAAATCTCGTTTCACGGA‑GG‑G‑ACAAAGACGAAGC‑AAAAACAC‑AAC‑AG‑AAAAAATTTTTTTGAGTCGCGAC‑AAAAAATATgggacaaa                                                                                                                                                                               >  1:916576/1‑233 (MQ=255)
                                                              ttctCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTc                                                                                                                                                                            <  2:1338080/239‑1 (MQ=255)
                                                                 tcGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGCGGG‑G‑AAAAGGGGCAAAA‑AAAAACTT‑AAA‑AA‑AAAAATTTTTTTGAGGCTTTGAA‑AAAAAATTTgtataaatttta                                                                                                                                                                           >  1:899192/1‑228 (MQ=255)
                                                                 tcGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAAGGCTACA‑AAAAACTT‑TTC‑AA‑AAAAACTTTTTTTTAGACTTGTC‑AAAAAACTTTGTAAAA‑TTTTaa                                                                                                                                                                         >  2:1380176/1‑239 (MQ=255)
                                                                      gtgAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAAGGGGAACG‑AAAAACCT‑TAT‑AA‑AAAAAATTTTTTTGGTACATGTG‑AAAATATTTGTGTATA‑TTCTAAAaaat                                                                                                                                                                    >  2:749831/1‑239 (MQ=255)
                                                                      gtgAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGGAACG‑AAAAAACT‑TAC‑AA‑AAAAAATTTTTTTGTGAATTGAC‑AAAAAAATTTTTAATA‑TTTTTAAatat                                                                                                                                                                    >  1:357757/1‑239 (MQ=255)
                                                                        gAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGGAAAG‑AAAAAACT‑TTA‑AG‑AAAAAATTTTTTTGGGAATTTAC‑AAAAAATTTTGGAAAA‑TTTTAAAAAAttt                                                                                                                                                                  >  2:51767/1‑239 (MQ=255)
                                                                            ggCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCa                                                                                                                                                              <  2:427176/239‑1 (MQ=255)
                                                                            ggCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCa                                                                                                                                                              <  2:403029/239‑1 (MQ=255)
                                                                               tATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCagga                                                                                                                                                           <  1:339870/239‑1 (MQ=255)
                                                                                aTCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCagga‑g                                                                                                                                                         <  2:652645/239‑1 (MQ=255)
                                                                                 tCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAGAGGACACG‑AAAAAACA‑TAC‑AA‑AAAAAATTTTTTTGCGAGATTAC‑AACAGAATTTGTAGTA‑TTTTTAAAAAttttttacgggg                                                                                                                                                         >  1:1445770/1‑231 (MQ=255)
                                                                                 tCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCagga‑gg                                                                                                                                                        <  2:1454155/239‑1 (MQ=255)
                                                                                  caccccaacTACCGGTATCAACAAAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCGCGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGt                                                                                                                                                       <  1:66500/231‑1 (MQ=255)
                                                                                  cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGt                                                                                                                                                       <  2:1204491/239‑1 (MQ=255)
                                                                                   aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGCGGG‑G‑AAAAGGGGC‑ACA‑AAAATACA‑TAA‑AG‑AAAAAATTTTTTTGGGAATTGAC‑AAAATATTTTGTAATA‑ATTTAAAATAttttttaagaagtg                                                                                                                                                       >  2:666912/1‑229 (MQ=255)
                                                                                   aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGCGGG‑G‑AAAAGGGCAAAAG‑AAAACACT‑T‑C‑AGAAAAAATTTTTTTTGA‑AATTGAA‑AAAAAAATTGGGAAAATTTTTAAAAAAttttttgaagggg                                                                                                                                                        >  1:1204491/1‑230 (MQ=255)
                                                                                   aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTg                                                                                                                                                      <  1:972116/239‑1 (MQ=255)
                                                                                        aTCTACCGGAATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGTC‑AAAAGAGGAAAGC‑AAAAACTT‑AAA‑AC‑GAAAAGTTTTTT‑GAGAATTTAT‑AAAATATATTGTAAAC‑TTCTAAAAAAATTTTTAGGC‑GGTG‑agaca                                                                                                                                                >  1:453940/1‑235 (MQ=255)
                                                                                             ccGGTATCAACCCAAACATTTGCCTCACCTCCTTTTTTATAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGTCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAGAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATg                                                                                                                                           <  1:501150/239‑1 (MQ=255)
                                                                                                 tATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAata                                                                                                                                                                                <  2:184519/201‑1 (MQ=255)
                                                                                                 tATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTg                                                                                                                                        <  2:128052/238‑1 (MQ=255)
                                                                                                  aTCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGc                                                                                                                                       <  2:799033/238‑1 (MQ=255)
                                                                                                         caAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGc                                                                                                                              <  2:19187/239‑1 (MQ=255)
                                                                                                          acaCATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGcc                                                                                                                             <  1:370127/237‑1 (MQ=255)
                                                                                                           aaCATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGGAACG‑AAAAAACT‑TTC‑AA‑AAAAAATATTTTGGAGGCTTGTA‑AAAAAAATTTGTAATA‑ATTTAAAATATTTTGTTGGA‑GGTG‑GAAAAATATAATGCCCa‑aaatacc                                                                                                                            >  2:291358/1‑233 (MQ=255)
                                                                                                                 ttCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCtg                                                                                                                     <  2:824969/239‑1 (MQ=255)
                                                                                                                 ttCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCtg                                                                                                                     <  2:125342/239‑1 (MQ=255)
                                                                                                                   tctaccctcctTTGTTAGAATAATTCTCATACTTCACAGAAGAGTGTACCACCGGTGTATTAAAAATCAAATAACACGATACTAAATATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AGAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TACTAAAATATTTTTCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCtgtg                                                                                                                   <  1:863950/234‑1 (MQ=255)
                                                                                                                     tCACCGCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAAGCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCATTGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGTC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGa                                                                                                                 <  2:395217/239‑1 (MQ=255)
                                                                                                                      cACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATGATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGaa                                                                                                                <  2:453940/239‑1 (MQ=255)
                                                                                                                        cctcctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGaaaa                                                                                                              <  2:757970/239‑1 (MQ=255)
                                                                                                                          tcctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGCAAAG‑AAAAAACT‑TAA‑AG‑AAAAAATTTTTTTTGGACTTTAA‑AAAATATTTGGTCATA‑TTCTAAAAAATTTTTTAGGA‑GGGG‑AAAAAAAATGTTTCCCA‑ACTGCCCGG‑TCTCTGGGAAAGa                                                                                                            >  2:1327700/1‑239 (MQ=255)
                                                                                                                            ctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAAGGGCAACG‑AAAATACT‑TAC‑AG‑AAAAAATTTTTTGGAGACTTGAC‑AAAAAATTTTGTTATA‑TTCTAAAAAATTTTTTAGGC‑GGGG‑ACAAAATATGTTTTCAC‑AAAGCCCGG‑GCTTTGGgaaagaaa                                                                                                          >  1:428123/1‑239 (MQ=255)
                                                                                                                             tttttGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAAt                                                                                                         <  2:1409998/239‑1 (MQ=255)
                                                                                                                              ttttGAGAATAATTCTCATCTTTCACATAAAAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑GAAAAAAGGGAAACA‑AAAATCCT‑TA‑‑AG‑AAAAAATTTTTTTGTGGATTTAA‑AAAATATTTTTGAATA‑ATCTTAAAAAATTTTTAGCAGGGGG‑ACAAAAATTATTGCCCA‑A‑TGCCCGGATCGTTGGaaaaaaaag                                                                                                         >  1:795741/1‑238 (MQ=255)
                                                                                                                               tttGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGa                                                                                                       <  2:899192/239‑1 (MQ=255)
                                                                                                                                   agaATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGAGGCAAAG‑AAAAAACT‑TTC‑AA‑AAAAAATTTTTTTTGGAATTGAC‑AAAAAATATTGTAATA‑TTTTAAAAAATTTTTTAGGA‑GGTG‑TCAAAAAATTTTTTCCA‑AGTGGCCGG‑GCGTTGGGAAAAAAAAAATA‑ga                                                                                                  >  1:386189/1‑238 (MQ=255)
                                                                                                                                    gaATAATTCTCATCTTTCACATAAGAGTTTACCGCCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑Gt                                                                                                  <  2:656242/238‑1 (MQ=255)
                                                                                                                                    gaATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑Gt                                                                                                  <  2:1432821/238‑1 (MQ=255)
                                                                                                                                     acagatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTGTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑Ta                                                                                               <  2:503327/235‑1 (MQ=255)
                                                                                                                                     aataatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑Ta                                                                                               <  2:468405/239‑1 (MQ=255)
                                                                                                                                     aataatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑Ta                                                                                               <  1:302603/239‑1 (MQ=255)
                                                                                                                                     aataatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑Ta                                                                                               <  1:188528/239‑1 (MQ=255)
                                                                                                                                      ataatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAATAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑Ta                                                                                               <  1:1330620/238‑1 (MQ=255)
                                                                                                                                       taatTCTTATTAGTCACTGAAGTGTGTCACACCGGTGTATTAAAAATCAAATAAGGCAATGATAATTATATGTAAAGAAAATCTCATTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AATATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGAGTTGAC‑AAAAGATTTGGTAATA‑TTCTAAAATAGTTTGCAGGA‑GGTG‑TCAAAGTATGGTGCCCA‑AGTGCTCGG‑TCGGTGGATAAGAAATGATA‑AT‑GACa                                                                                             <  1:1231909/239‑1 (MQ=255)
                                                                                                                                             tcATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCtt                                                                                       <  2:413979/239‑1 (MQ=255)
                                                                                                                                               aTCTTTCACATAATAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAAGCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAAGCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCa                                                                                     <  1:785876/239‑1 (MQ=255)
                                                                                                                                               aTCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCa                                                                                     <  2:479824/239‑1 (MQ=255)
                                                                                                                                                    tCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGGAAAG‑AAAAACCT‑TAT‑AG‑AAAAATTTTTTTGGGGACATGAC‑AAAAAATTTGGTAATA‑TTTTTAAAAAATTTTTTGTA‑GGGG‑ACAAAATATGTTGTCCA‑AGTGGCCGC‑TCTGTGGGAAAGAAATAATA‑GA‑TAAGAAGATTCACttcc                                                                                >  1:940024/1‑236 (MQ=255)
                                                                                                                                                     cacaTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCaa                                                                               <  2:781511/239‑1 (MQ=255)
                                                                                                                                                     cacaTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAAGCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCaa                                                                               <  2:1373284/239‑1 (MQ=255)
                                                                                                                                                       caTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCaaaa                                                                             <  2:940024/239‑1 (MQ=255)
                                                                                                                                                       caTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCaaaa                                                                             <  2:928493/239‑1 (MQ=255)
                                                                                                                                                       caTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCaaaa                                                                             <  2:567506/239‑1 (MQ=255)
                                                                                                                                                         tAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGc                                                                                                                                                                                                                                             <  1:540443/89‑1 (MQ=255)
                                                                                                                                                                   ccaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCa                                                                 <  2:154152/239‑1 (MQ=255)
                                                                                                                                                                       cGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑GAAAAAGGGAACG‑AAAATACT‑TAC‑AG‑AAAAAAATTTTTTGAGACCTTTA‑AAAAAATTTTGTAATA‑ATTTAAAATATTTTTTAGGG‑GGTG‑ATAAAATATGTTGCCAC‑AGCAGCCGG‑TCTGTGGGAAAAAAATGAGA‑GT‑TCAAAAGATTACATGGAAAAGAGAAGAGGtgaacgg                                                             >  1:606756/1‑233 (MQ=255)
                                                                                                                                                                       cGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGCAACG‑AAAAACCT‑TAA‑AA‑AAAAATTTTTTTGGGGACATTAA‑AAAAAAATTGGTAATA‑TTCTAAAAAAATTTTTACGA‑GGGG‑AAAAAAAATATTTCGCACAGCG‑CCGG‑TCTGTGGGGAAAAAAAAATATTT‑TAAAGAGTTTCA‑TGCAAAAAAGATGAgggtgtccc                                                             >  1:1143751/1‑232 (MQ=255)
                                                                                                                                                                           gtATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGAGGCAACC‑AAAATACT‑TAC‑AA‑AAAAAATTTTTTTGTGAATTTAA‑AAAAAAATTGGTAATA‑TTTTAAAAAATTTTTCAGGA‑GGGG‑AAAAAATATGTTTTCCA‑AATGCCCGG‑TCCTGGGAAAAAAAAAGATA‑AA‑TAAAAAAACTTACTGCAAAAGAGACTAGGGCACCATGCgg                                                         >  1:441176/1‑238 (MQ=255)
                                                                                                                                                                               tAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAAGGGAACA‑AAAAAACT‑TAT‑AGAAAAAATTTTTTTGGGGA‑TTGAC‑AAAAAAATTTGGAAAA‑TTCTTAAATATTTTTTTGGA‑GGGGTACAAAAAATTTGGACAA‑TGTCCCCGG‑CTTGT‑GAAAAAAAAAGAAA‑GTATAAAAACATTCCTTGCAAAAGAAATGAGGTCAcgggcgtgggc                                                      >  1:728824/1‑229 (MQ=255)
                                                                                                                                                                                 aaaaTCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAAGGGAAAG‑AAAAAACT‑TAC‑AG‑AAAAATTTTTTTGTAGAATTTAC‑AAAATAATTGGGAATA‑TTTTAAAAAATTTTGTAGGA‑GGGG‑ACAAAAAATGTTTTCCA‑AGTGCCCGG‑GCTGTGGGAAAGAAAAAATA‑GA‑TACAAAGCTTCACTGACAAAAAGAGGAGGTCAACGAGCgggggagt                                                   >  1:1346918/1‑235 (MQ=255)
                                                                                                                                                                                      cAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGCAAAG‑AAAAAACT‑TTC‑AG‑AAAAAATTTTTTTGGGGCTTTAC‑AAAATATTTTGTAATA‑TTTTAAAATAATTTTTAAGA‑GGGG‑GCAAAAAATTTTGGCCC‑AGTGGCCGG‑GCTGTGGGAAAAAAAAGAAA‑GT‑TACAGAGCTTTCCTGCAAAAGAGAAGAGGGTACCGGGCGGGGaaggtttag                                              >  2:1409272/1‑231 (MQ=255)
                                                                                                                                                                                        aaTAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCagag                                            <  1:222686/239‑1 (MQ=255)
                                                                                                                                                                                                  tACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑t                                                                                                                        <  2:1103917/155‑1 (MQ=255)
                                                                                                                                                                                                  tACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGa                                                      <  1:997594/219‑1 (MQ=255)
                                                                                                                                                                                                   aCTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCa                                                                 <  1:895367/207‑1 (MQ=255)
                                                                                                                                                                                                      aaTTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGAt                              <  2:624924/239‑1 (MQ=255)
                                                                                                                                                                                                         tataTGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGAtttt                           <  2:882963/239‑1 (MQ=255)
                                                                                                                                                                                                           tatGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTtct                         <  2:1023074/239‑1 (MQ=255)
                                                                                                                                                                                                                aaaGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGGGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGAt                     <  2:1191219/238‑1 (MQ=255)
                                                                                                                                                                                                                 aaGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAAGGGCAAAG‑AAAAAACC‑TAC‑AG‑AAAAAATTTTTTTGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTTCAGGA‑GGGG‑ACAAAATATATTGCCCA‑AGTGCCCGG‑GCTGTGGAAAAGAAATAATA‑AT‑TAAAAAGCTTCAATGCAAAAGAGAAGAGGGCACCGTGAGAGGAGGGTTTAGAGCGAGGCCGTTCGATTTTTTCGCTaa                   >  2:355484/1‑239 (MQ=255)
                                                                                                                                                                                                                           cGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTc         <  2:851541/239‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               
AGCATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GG‑G‑AAAAGGGGCAACG‑AAAATCCT‑TAC‑AG‑AAAAATTTTTTTGGAGACTTGAC‑AAAATATTTGGTAATA‑TTCTAAAATATTTTGCAGGA‑GGTG‑ACAAAATATGTTGCCCA‑AGTGCCCGG‑TCTGTGGAAAAGAAATGATA‑GT‑TACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCG  >  NC_021214/358274‑358738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑