Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_021214	448,951	T→C	R536R (AGA→AGG)	TMARI_RS02175 ←	methyl‑accepting chemotaxis protein 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_021214	448,951	0	T	C	100.0%	53.7 / NA	53	R536R (AGA→AGG)	TMARI_RS02175	methyl‑accepting chemotaxis protein 1
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (25/28);  total (25/28)

TTCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTTCTCAGGCTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAGTTTCCTTATCTCGTCTGCCACCACCGCAAAGCCTCTTCCCGCTTCTCCAGCTCGAGCTGCTTCTATCGCTGCGTTCAACGCGAGCAGGTTCGTCTGCTCTGCTATCGAGCTGATCGTGTCCACTATCTCTCCTATCGT  >  NC_021214/448717‑449148                                                                                                                                                                                                                                           |                                                                                                                                                                                                      ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCCTGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  2:1174756/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCTATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  2:1325055/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  1:644918/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  2:1299989/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  2:1368652/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   <  2:509822/239‑1 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  1:858238/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  1:759616/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  2:60163/1‑239 (MQ=14) ttCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   >  2:682099/1‑239 (MQ=14) ctCCCCAACTCCGTCGACTATCTTTGTGACGTTGTCCTTCGCGCTCGCCATCTCCTCCCCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCCCCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCa                                                                                                                                                                                                   <  1:991925/238‑1 (MQ=9)  tCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTccttaa                                                                                                                                                                                                  >  1:1298834/1‑236 (MQ=14)  tCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaa                                                                                                                                                                                                  >  2:418892/1‑238 (MQ=11)  tCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaa                                                                                                                                                                                                  >  2:116329/1‑238 (MQ=11)   cccaacctctTTCGTCTATCTTTGTGACGTTGCCCCTTGCTTTCGCCATCTCCTCCGCCGCCGCTCCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTTTCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaa                                                                                                                                                                                                 <  1:605405/233‑3 (MQ=11)   ccACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCGCCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaa                                                                                                                                                                                                 <  2:1257602/239‑3 (MQ=11)   ccACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGACCATCTCTTTCGAGCCGTTTTCTACGCTTTCTATCGTTGTcctcca                                                                                                                                                                                                  >  1:822484/1‑236 (MQ=9)   ccACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTcctcca                                                                                                                                                                                                  >  1:139765/1‑236 (MQ=14)   ccACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaa                                                                                                                                                                                                  >  2:548349/1‑237 (MQ=11)   ccACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaa                                                                                                                                                                                                  >  2:1075777/1‑237 (MQ=11)   ccACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCAACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaa                                                                                                                                                                                                  >  1:186568/1‑237 (MQ=11)    ctcaACCCCTTCGACTTTCTTTGTGCCGTTGTCCATGCCGCTCGCCTTCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:309529/237‑4 (MQ=1)    cccacccccTTCGACTATCTTTGTGACTTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTTTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:24180/232‑4 (MQ=0)    cccaccTCCTTCGACTAGCTTTGTGACGTTGTCCGTCGCGCTCGACATCTCCTCCGCCGCCGCCCCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCGGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:124519/234‑4 (MQ=1)    cccaACTCCTTCCACTTTCTGTGTGCCGTTGTCCTGCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTTTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:116329/237‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGCCGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:765312/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCTCCCTGCTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:618416/239‑4 (MQ=0)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:885186/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:862766/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:20069/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:462578/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:1156620/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:724520/239‑4 (MQ=1)    cacaACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:1291758/239‑4 (MQ=1)    cacaACCCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:797439/239‑4 (MQ=1)      cacctctTTCGACTATCGTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACAGCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:42160/234‑4 (MQ=0)                        ttGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:1191369/219‑4 (MQ=1)                        ttGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                >  1:1191369/1‑216 (MQ=1)                               tttGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaa                                                                                                                                                                                                 <  1:561366/210‑3 (MQ=11)                               gTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaa                                                                                                                                                                                                 >  2:561366/1‑209 (MQ=11)                                             tCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:236775/198‑4 (MQ=1)                                             tCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                >  2:236775/1‑195 (MQ=1)                                             tCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCAACCTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGc                                                                                                                                                         >  2:1101000/1‑237 (MQ=14)                                               gCCATCTCCTCCGCCGCCGCCCCCTGCTCCTGCGCAGTGGCAGCTGTGCTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGCCTTCTTCTCCCCTCACCGCCATCTCGTCCACTCCTTCGAACATCTCTTTCGTGCCGTTTTCTACGTGTTCTCTCGTTGTCCTCAACCTGCTCAGCCTCTTTCCTCTGTCTGCTGTCGCTCTCTGGctct                                                                                                                                                      >  1:1238305/1‑238 (MQ=11)                                               gCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTTTCTTTCATGCTGTTGATCTCTTCTATCCTTACAAGGATCTCTATGACTCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCATTAGAACATCTCTTTCGAGGCGTTTTATACGTGTTCTATCGTTGTCGTCAGACTGCTCAgaag                                                                                                                                                                                      >  2:1174853/1‑203 (MQ=11)                                               gCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  2:1080378/196‑4 (MQ=1)                                               gCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                >  2:244422/1‑193 (MQ=1)                                               gCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                <  1:244422/196‑4 (MQ=1)                                               gCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaa                                                                                                                                                                                                 >  2:11927/1‑193 (MQ=11)                                               gCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCCCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCaaac                                                                                                                                                                                                >  1:1080378/1‑193 (MQ=1)                                                        tccGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCAAACTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAg                                                                                                                                            <  2:412122/239‑1 (MQ=14)                                                        tccGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCAAACTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAg                                                                                                                                            <  2:813933/239‑1 (MQ=14)                                                        tccGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCAAACTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAg                                                                                                                                            <  2:324495/239‑1 (MQ=14)                                                         ccgccgccgCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCAAACTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAGt                                                                                                                                           >  2:1285554/1‑239 (MQ=11)                                                                                                    tATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTCCTCAAACTGCTCAGCATCTGCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAGTTTCTTTACCTCGTCTGTCAGCACCGCACACCCCCTGccctcc                                                                                                 >  1:548367/1‑235 (MQ=11)                                                                                                                                                                                                  acctcctttttCGACCCTTTTTCTTCGTTTTCTCTCGTTGGCCTCAAGCTGCTCAGCATCTTCGCTATGGCTTCTGGCCCCCTCTGGCTCTCTTCTGCGAGTTTCCTTATCTCGTCTGCCACCACCGCAAAGCCCCTTCCCGCTTCCCCAGCTCGAGCTGCTTCTATCGCTGCGTTCAACGCGAGCAGGTTCGTCTGCTCTGCTATCGAGCTGATCGTGTCCACTATCTCTCCTATCGt  <  1:778207/231‑1 (MQ=1)                                                                                                                                                                                                                                           |                                                                                                                                                                                                      TTCCACAACTCCTTCGACTATCTTTGTGACGTTGTCCATCGCGCTCGCCATCTCCTCCGCCGCCGCACCCTGTTCCTGCGCAGTGGCAGCTGTGTTCTCTATCATGCTGTTGATCTCTTCTATCCTTCCAAGGATCTCTCTGAATCTCTTTGTGACTTCTTCTCCCATCACCGCTATCTCGTCCACTCCTTCGAACATCTCTTTCGAGCCGTTTTCTACGTGTTCTATCGTTGTTCTCAGGCTGCTCAGCATCTTCGCTATGTCTTCTGTCGCCCTCTGGCTCTCTTCTGCGAGTTTCCTTATCTCGTCTGCCACCACCGCAAAGCCTCTTCCCGCTTCTCCAGCTCGAGCTGCTTCTATCGCTGCGTTCAACGCGAGCAGGTTCGTCTGCTCTGCTATCGAGCTGATCGTGTCCACTATCTCTCCTATCGT  >  NC_021214/448717‑449148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑