| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_021214 | 1,645,029 | A→G | L114P (CTT→CCT) | TMARI_RS08475 ← | DNA‑binding response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_021214 | 1,645,029 | 0 | A | G | 97.8% | 1094.9 / 7.2 | 326 | L114P (CTT→CCT) | TMARI_RS08475 | DNA‑binding response regulator |
| Reads supporting (aligned to +/- strand): ref base A (5/2); new base G (151/164); total (158/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
Only 100 of 334 total aligned reads displayed.
TATCCCCAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAAGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGTGCTTCCTCTCC > NC_021214/1644795‑1645264 | tATCCCCAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCaggaag < 1:881400/239‑1 (MQ=255) aTCCCCAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCaggaag < 2:65147/238‑1 (MQ=255) tCCCCAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGc > 2:1354025/1‑238 (MQ=255) tCCCCAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTAAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGATTAGCGGTGGAAAGCCTTCTGCATATAGCCTTCCCCCCCGCaggaag > 1:388472/1‑237 (MQ=255) ccAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGctctc < 2:1377236/239‑1 (MQ=255) ccAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGctctc < 1:1247688/239‑1 (MQ=255) agTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCAc > 2:1425057/1‑239 (MQ=255) ttGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCt < 1:1429969/239‑1 (MQ=255) tGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGcgg > 1:852709/1‑237 (MQ=255) tCCAGTAGAACATCCCTTCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGCCAGGAGTGAGGTTCAC‑TTTTTTCCCTTTCACTTTCACTTCGTACTTTTCCACATCGATTTCAGGATCCTTGCCTATGCTCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAACGCCTTCTGAATATAGCCCTCACGCTCGCAGGCACCTCTCTCTCGCtca > 1:133348/1‑236 (MQ=255) gaagaaCATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCACTTTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACg > 2:19823/1‑238 (MQ=255) aagaaCATCCCTGCTGAAAATTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCGC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGa < 2:449938/233‑1 (MQ=255) aagaaCATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCTAGATGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGTATGCCTTATGAATATAGCCTTCACACTCGCAGGAAGATCTCTCACGCTGCACAGCt > 1:1080105/1‑239 (MQ=255) ctaaCATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGGTAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCt < 1:517980/236‑1 (MQ=255) agaaCATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGTCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGc < 1:752153/237‑1 (MQ=255) cATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTg < 2:743489/239‑1 (MQ=255) cATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTg < 2:547275/239‑1 (MQ=255) tCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGAt < 2:924296/239‑1 (MQ=255) ctgctgAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTa < 1:480174/239‑1 (MQ=255) ctgctgAAAACTTTTCCTTCGCTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTCCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCTTTCTGAATATAGCCTTCACCCTCGCACTAAGCTCTCTCACGCTTAACGGACTGGTGCTGt > 1:449938/1‑238 (MQ=255) ttctgAAAACGTTTCCTTCGTTTACCGCGAGGAATCGGAGCAGTTCAAATTCGGGAGGAGTGAGGTTCAC‑TGTTTTCCCGCTCACGTTCACTTCGTACTTTTCCGCATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGTCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCGCGCAGGAAGCTCTCTCTCGCTGAACGGCTTGGTGATGTAg < 1:1136286/237‑1 (MQ=255) tgctgAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAg < 2:1273178/239‑1 (MQ=255) tctgAAAGCTTTTCCTTCTTTTTCCGCTAGGCATCGGAGCAGTTCAAATTCGAGAGGAGTGACGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCTTGCTTTTTCATATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGTATATAGCCTTCACCCTCTCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAgt < 1:1232920/238‑1 (MQ=255) gctgAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCATGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAg > 2:509005/1‑238 (MQ=255) gctgAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAg > 2:309966/1‑238 (MQ=255) ttCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCg < 1:616722/239‑1 (MQ=255) ttCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTAGAGAGGAGCGAGGTTCAC‑TTTTTTCACTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCATTTCTTCCTTGCTCTGAGTAGCGGTGGACAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCAAGCTGACCGGCTTGGTGATGCAGTCGTCCGCACCg > 1:1054640/1‑239 (MQ=255) cGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTTCTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTGCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTcc < 2:1256523/239‑1 (MQ=255) cGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTcc < 2:624582/239‑1 (MQ=255) cGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTcc < 2:1214703/239‑1 (MQ=255) tttCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAg < 2:1123785/238‑1 (MQ=255) cGGAGCAGTTTAACTTCGAGTGGATGTAGGTTCAC‑TTTTTTTCCTCTCACTTTCACTTCGTACTTTGCCACATCGATTTCAAGATCCTTGTCGATGATCTTCTTAGGCCTTGCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCGCCGAGCTCCAGCCCAAGCACCTTGTc < 1:633485/239‑1 (MQ=255) tCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAAttctt < 2:366808/238‑1 (MQ=255) aTTCGAGAGGAGTGAGATTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAg > 1:587347/1‑217 (MQ=255) gaggagTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTgc < 2:164189/238‑1 (MQ=255) ggagTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTgcg < 2:1024661/237‑1 (MQ=255) agTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTc < 2:594217/238‑1 (MQ=255) gAGGTTCAC‑TGTTTTCCCTCTTACGTTCACTTCGTTATTTTCCGATTCGATTTAAAGAGCCTTGGCTATGATCTTCGTAGGCCTTTCTCCCTTTCTCTGAGTAGCGGTTGAAAGCCTTCTGAACATTGCCTTCACCCTCGCAGGAAGCTCTTTCACTCTGAACGTCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCGTCTCCCTTTGCGCTCAgg < 1:271403/238‑1 (MQ=255) gTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTTCTTTTCCACGTCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAg < 1:1375441/238‑1 (MQ=255) tCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATc < 1:723333/239‑1 (MQ=255) cAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTTCGCTCAGGAAGATc > 1:214063/1‑238 (MQ=255) ttttCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCTCCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACgggg < 2:1080105/239‑1 (MQ=255) tttCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACggggg < 2:1310484/239‑1 (MQ=255) tttCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACggggg < 2:437604/239‑1 (MQ=255) ttCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGgt < 1:1086006/239‑1 (MQ=255) tCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGgtg < 1:733658/239‑1 (MQ=255) tCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAAGAAGCTCTCTCACGCTGAACGGCTTGGTGCTGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGgtg > 1:94944/1‑239 (MQ=255) ctctCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGgtgt > 1:1392408/1‑237 (MQ=255) ctcACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTcc > 2:557595/1‑177 (MQ=255) ctcACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTcc < 1:557595/177‑1 (MQ=255) ctcACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCtt > 1:1308858/1‑239 (MQ=255) ctcACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCtt > 2:224359/1‑239 (MQ=255) cactttcacttCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGt > 2:589888/1‑239 (MQ=255) ttcccttCGGACTTTTCCACATCGATTTCAAGATCCGTGGATATGATCATCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTAttt < 1:32146/239‑1 (MQ=255) ttcacttCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTAttt < 2:1392408/239‑1 (MQ=255) ttCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCa > 1:1003196/1‑239 (MQ=255) ttCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCa < 2:333963/239‑1 (MQ=255) cGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGa > 1:962667/1‑183 (MQ=255) ttCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGgatctga < 2:927354/239‑1 (MQ=255) ttCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGgatctga < 2:845369/239‑1 (MQ=255) ttCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGgatctga < 2:730790/239‑1 (MQ=255) ttCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAAGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCCCCGGAAGATCACGGGGGCGTTCTTGTATTTCTCCATGgatctga > 1:170090/1‑239 (MQ=255) cTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGgatctg > 2:1289010/1‑217 (MQ=255) tGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGCATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTCCGCTCCGGAAGATCACGGGGGTGTTCTTGTATTTTTCCCTGGTTATGACCTTATTTACACGCTCGACGGCGTCGGtt > 1:1178870/1‑239 (MQ=255) tGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCCTGGAGCTGATCTTCCTGACCAGCTCGCATCCGTCCAt > 1:693237/1‑238 (MQ=255) cttAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGaa < 2:919222/239‑1 (MQ=255) tAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCCCCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGc < 1:1275386/239‑1 (MQ=255) tAGGCCGTTCTTACTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATGTAGCCTTCACCCTCGCAGGAAGCTCTCGCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGc < 1:1352186/239‑1 (MQ=255) ccTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCAt < 1:224359/237‑1 (MQ=255) ccTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCAt < 2:1327461/237‑1 (MQ=255) ccTTTCTGCCTTGCTCTGAGTAGCGGTGGCAAGCCTTCTGAATATAGCCTTCACCCGCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATg < 2:96281/238‑1 (MQ=255) gtcttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGatat < 2:294812/238‑1 (MQ=255) tcttcCTTGGTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGatat < 1:1096287/238‑1 (MQ=255) tcttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTg > 1:403133/1‑145 (MQ=255) tcttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTg < 2:403133/145‑1 (MQ=255) tcttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTTACCAGCTCGAAGCCGTCGATTCCAGGAAGCCTGttat > 1:11957/1‑238 (MQ=255) tcttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGatat > 2:467369/1‑238 (MQ=255) tcttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCAACGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATc < 1:308177/239‑1 (MQ=255) ttcCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCa < 2:1450395/239‑1 (MQ=255) ccTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACt < 1:491891/239‑1 (MQ=255) ccTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACt < 2:1415981/239‑1 (MQ=255) cTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTa > 2:664319/1‑239 (MQ=255) gCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATg > 2:282795/1‑238 (MQ=255) tctGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCACGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTTCTGACCCGCTCGAAGCCGTCGATTCCAGGAACCCTGCTATCCACTATGAAc > 2:1036326/1‑239 (MQ=255) aGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAgg > 1:610326/1‑139 (MQ=255) aGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATg > 1:814075/1‑238 (MQ=255) aGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATg > 2:712039/1‑238 (MQ=255) aGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGCGTTCTTGTATTTATCCATGGATCTGCACTTCCTGACCACCTCGAAGCCGTCGATTCCAGGAAGAATGATATCCACTATGCACATg > 1:242949/1‑238 (MQ=255) aGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGATCCAGCCCAAGCACATTGTCGAAGTCTTCTCCCTTTGCGATCAGGCAGATCACGGGGGTGTTCTTTTATTTCTCCATGGAACTGATCTTCCGAACCAGATCGAAGCCGTAGATTCCACGTAGCACGAGATCCAACATGaaaacta > 1:1462265/1‑234 (MQ=255) gAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTAttt < 2:958052/155‑1 (MQ=255) gAAAGCCTTCTGAATATAGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCa < 1:788156/160‑1 (MQ=255) ataGCCTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAAtttt > 1:672436/1‑239 (MQ=255) cTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACTTGTCCACGTCTTCGTCGTTGGCAATTTTGAGt > 1:979638/1‑238 (MQ=255) cTTCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGt < 1:1406178/238‑1 (MQ=255) tCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCa > 1:545601/1‑138 (MQ=255) tCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGTGCt > 1:1030374/1‑239 (MQ=255) tCACCCTCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGAGTTCTTGTATTTCTCCATGGACCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGCCTTCGTCGTTGGTAATGTTGAgggtt > 2:578696/1‑235 (MQ=255) tCGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCATCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGTGCTTCctct < 2:777627/239‑1 (MQ=255) cGCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGTGCTTCctct > 1:995798/1‑238 (MQ=255) gCAGGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGTGCTTCCTCTcc < 2:691081/239‑1 (MQ=255) | TATCCCCAGAGTTTGTCCAGAAGAACATCCCTGCTGAAAACTTTTCCTTCGTTTTCCGCGAGGAATCGGAGCAGTTCAAATTCGAGAGGAGTGAGGTTCAC‑TTTTTTCCCTCTCACTTTCACTTCGTACTTTTCCACATCGATTTCAAGATCCTTGGCTATGATCTTCTTAGGCCTTTCTTCCTTGCTCTGAGTAGCGGTGGAAAGCCTTCTGAATATAGCCTTCACCCTCGCAAGAAGCTCTCTCACGCTGAACGGCTTGGTGATGTAGTCGTCCGCACCGAGCTCCAGCCCAAGCACCTTGTCGAATTCTTCTCCCTTTGCGCTCAGGAAGATCACGGGGGTGTTCTTGTATTTCTCCATGGATCTGATCTTCCTGACCAGCTCGAAGCCGTCGATTCCAGGAAGCATGATATCCACTATGAACATGTCCACGTCTTCGTCGTTGGCAATTTTGAGTGCTTCCTCTCC > NC_021214/1644795‑1645264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |