New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_021214	1071755 =	356 (1.100)	10 (0.030)	7/448	19.6	2.7%	coding (662/1527 nt)	TMARI_RS05395	FMN‑binding glutamate synthase family protein
	?	NC_021214	1071819 =	364 (1.150)					coding (726/1527 nt)	TMARI_RS05395	FMN‑binding glutamate synthase family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCACCGTATCTGAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGAAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_021214/1071996‑1071755 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagagAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTCAGATACGGTGCTGAGGCGAAGGTGGATTTGATCACCGTCGATGGAGCACCGGGTGGAACGGGTATGA  >  NC_021214/1071819‑1072051                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCACCGTATCTGAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGAAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCA                                                                                                                                                                                                                                              >  1:173218/1‑239    ACCGTATCTGAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGAAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAG                                                                                                                                                                                                                                           <  1:561439/239‑1        TATCTGAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGCAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCTGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGgcgg                                                                                                                                                                                                                                       >  2:1005457/1‑235             GAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGAAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGA                                                                                                                                                                                                                                            <  1:914844/229‑1             GAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGAAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGA                                                                                                                                                                                                                                            >  2:914844/1‑229                                                                                                                                                                                                  AGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTCAGATACG                                                              >  1:355879/1‑222                                                                                                                                                                                                  AGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTCAGATACG                                                              <  2:355879/222‑1                                                                                                                                                                                                  AGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTC                                                                     >  1:1096875/1‑215                                                                                                                                                                                                  AGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTC                                                                     <  2:1096875/215‑1                                                                                                                                                                                                  AGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGG                                                                          <  1:1136683/210‑1                                                                                                                                                                                                  AGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGG                                                                          >  2:1136683/1‑210                                                                                                                                                                                                     TCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGAGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGG                                                                          >  1:363158/1‑207                                                                                                                                                                                                     TCGGGATCGGGGAGAACTATATAACCTCTTCGTTTCAGTTCCAGAGAGCGTTCAAAGAGGGATAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGG                                                                          <  2:363158/207‑1                                                                                                                                                                                                                  GAACTATATAACCTCTTCTTTTCAGTT‑CAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTT                                                                                                                                                                                     <  1:995533/86‑1                                                                                                                                                                                                                  GAACTATATAACCTCTTCTTTTCAGTT‑CAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTT                                                                                                                                                                                     >  2:995533/1‑86                                                                                                                                                                                                                                              CAGAGAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTCAGATACGGTGCTGAGGCGAAGGTGGATTTGATCACCGTCGATGGAGCACCGGGTGGAACGGGTATGA  >  1:949278/1‑238                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCACCGTATCTGAGAGCCATGGCAAGTTCAACAGCCGAGTAAGCTCCCGTCTTCAAGGTGATTCGTTTGAACCCGAGTTTTCTGAGTCTTTCCACTTCTTTCAGGAAGGACTCCTTAGAGACAAAACCAAGTCTTGAGTGTCTTTCGAACTCCTTGATTTCTCCCTCTTTGAACGCTCTCTGAACTTCCGGAAGTTCGGGATCGGGGAGAACTATATAACCTCTTCTTTTCAGTTCCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_021214/1071996‑1071755 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagagAGCGTTCAAAGAGGGAGAAATCAAGGAGTTCGAAAGACACTCAAGACTTGGTTTTGTCTCTAAGGAGTCCTTCCTGAAAGAAGTGGAAAGACTCAGAAAACTCGGGTTCAAACGAATCACCTTGAAGACGGGAGCTTACTCGGCTGTTGAACTTGCCATGGCTCTCAGATACGGTGCTGAGGCGAAGGTGGATTTGATCACCGTCGATGGAGCACCGGGTGGAACGGGTATGA  >  NC_021214/1071819‑1072051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.